RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W TOF2Q02208 771 aa2.42□□□□□ -2.02
HRD3YLR207W EGD1Q02642 157 aaKnown RBP2.42□□□□□ -2.02
HRD3YLR207W YMR130WQ04223 302 aa2.42□□□□□ -2.02
HRD3YLR207W MCP2Q06567 569 aa2.42□□□□□ -2.02
HRD3YLR207W YOR389WQ08912 624 aa2.42□□□□□ -2.02
HRD3YLR207W NBL1Q3E7Y6 73 aa2.42□□□□□ -2.02
HRD3YLR207W MRP13P12686 339 aa2.41□□□□□ -2.02
HRD3YLR207W SPO7P18410 259 aa2.41□□□□□ -2.02
HRD3YLR207W VPS1P21576 704 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W AMD2P22580 549 aa2.41□□□□□ -2.02
HRD3YLR207W MMS4P38257 691 aa2.41□□□□□ -2.02
HRD3YLR207W DIA4P38705 446 aaPredicted RBP2.41□□□□□ -2.02
HRD3YLR207W BFR1P38934 470 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
HRD3YLR207W VMA13P41807 478 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W AGX1P43567 385 aa2.41□□□□□ -2.02
HRD3YLR207W STB2P46679 850 aa2.41□□□□□ -2.02
HRD3YLR207W YJL132WP47014 750 aa2.41□□□□□ -2.02
HRD3YLR207W FMS1P50264 508 aa2.41□□□□□ -2.02
HRD3YLR207W PRO2P54885 456 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W RBA50Q04418 439 aa2.41□□□□□ -2.02
HRD3YLR207W SMD2Q06217 110 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W YPL272CQ08984 517 aa2.41□□□□□ -2.02
HRD3YLR207W LEU9Q12166 604 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W TAF3Q12297 353 aa2.41□□□□□ -2.02
HRD3YLR207W SAM1P10659 382 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W PCT1P13259 424 aa2.41□□□□□ -2.02
HRD3YLR207W ART10P18634 518 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W BUD5P25300 642 aaPredicted RBP2.41□□□□□ -2.02
HRD3YLR207W IMG1P25626 169 aa2.41□□□□□ -2.02
HRD3YLR207W IDH2P28241 369 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W ELM1P32801 640 aa2.41□□□□□ -2.02
HRD3YLR207W TIF3P34167 436 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W THI80P35202 319 aa2.41□□□□□ -2.02
HRD3YLR207W MRPL4P36517 319 aa2.41□□□□□ -2.02
HRD3YLR207W THI2P38141 450 aa2.41□□□□□ -2.02
HRD3YLR207W MSR1P38714 643 aa2.41□□□□□ -2.02
HRD3YLR207W SWP82P43554 623 aa2.41□□□□□ -2.02
HRD3YLR207W DPB11P47027 764 aaPredicted RBP2.41□□□□□ -2.02
HRD3YLR207W SMC3P47037 1230 aa2.41□□□□□ -2.02
HRD3YLR207W MSY1P48527 492 aa2.41□□□□□ -2.02
HRD3YLR207W RMD9P53140 646 aaKnown RBP2.41□□□□□ -2.02
HRD3YLR207W CPR8P53728 308 aa2.41□□□□□ -2.02
HRD3YLR207W PRM1P53835 661 aa2.41□□□□□ -2.02
HRD3YLR207W EFM6P53970 246 aa2.41□□□□□ -2.02
HRD3YLR207W VTC3Q02725 835 aa2.41□□□□□ -2.02
HRD3YLR207W ABZ2Q03266 374 aa2.41□□□□□ -2.02
HRD3YLR207W ACL4Q03771 387 aa2.41□□□□□ -2.02
HRD3YLR207W RPC11Q04307 110 aaPredicted RBP2.41□□□□□ -2.02
HRD3YLR207W MED2Q12124 431 aa2.41□□□□□ -2.02
HRD3YLR207W LCB4Q12246 624 aa2.41□□□□□ -2.02
HRD3YLR207W UTP10P42945 1769 aaKnown RBP2.4□□□□□ -2.02
HRD3YLR207W BI2P03873 423 aa2.4□□□□□ -2.02
HRD3YLR207W PRP2P20095 876 aaPredicted RBP2.4□□□□□ -2.02
HRD3YLR207W MAK31P23059 88 aa2.4□□□□□ -2.02
HRD3YLR207W AFG1P32317 509 aa2.4□□□□□ -2.02
HRD3YLR207W YBL055CP34220 418 aaPredicted RBP2.4□□□□□ -2.02
HRD3YLR207W YPT10P38146 199 aa2.4□□□□□ -2.02
HRD3YLR207W FAD1P38913 306 aa2.4□□□□□ -2.02
HRD3YLR207W NET1P47035 1189 aa2.4□□□□□ -2.02
HRD3YLR207W COS5P47187 383 aa2.4□□□□□ -2.02
HRD3YLR207W APT1P49435 187 aaKnown RBP2.4□□□□□ -2.02
HRD3YLR207W NUP84P52891 726 aa2.4□□□□□ -2.02
HRD3YLR207W RPN14P53196 417 aa2.4□□□□□ -2.02
HRD3YLR207W COS7Q07788 383 aa2.4□□□□□ -2.02
HRD3YLR207W CSR2Q12734 1121 aa2.4□□□□□ -2.02
HRD3YLR207W HEM1P09950 548 aaPredicted RBP2.4□□□□□ -2.03
HRD3YLR207W CLN1P20437 546 aa2.4□□□□□ -2.03
HRD3YLR207W KGD1P20967 1014 aaKnown RBP2.4□□□□□ -2.03
HRD3YLR207W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
HRD3YLR207W MYO3P36006 1272 aa2.4□□□□□ -2.03
HRD3YLR207W ARA1P38115 344 aa2.4□□□□□ -2.03
HRD3YLR207W OPY1P38271 328 aa2.4□□□□□ -2.03
HRD3YLR207W UBP5P39944 805 aa2.4□□□□□ -2.03
HRD3YLR207W SER3P40054 469 aa2.4□□□□□ -2.03
HRD3YLR207W YFR018CP43599 363 aa2.4□□□□□ -2.03
HRD3YLR207W RPA34P47006 233 aaPredicted RBP2.4□□□□□ -2.03
HRD3YLR207W YNL143CP53908 130 aa2.4□□□□□ -2.03
HRD3YLR207W YLR413WQ06689 675 aa2.4□□□□□ -2.03
HRD3YLR207W YFH1Q07540 174 aa2.4□□□□□ -2.03
HRD3YLR207W YLR049CQ12110 428 aa2.4□□□□□ -2.03
HRD3YLR207W INP53Q12271 1107 aa2.4□□□□□ -2.03
HRD3YLR207W YDL007C-AQ2V2Q0 85 aa2.4□□□□□ -2.03
HRD3YLR207W RAD61Q99359 647 aa2.4□□□□□ -2.03
HRD3YLR207W STE2D6VTK4 431 aa2.39□□□□□ -2.03
HRD3YLR207W ARG81P05085 880 aa2.39□□□□□ -2.03
HRD3YLR207W STE3P06783 470 aa2.39□□□□□ -2.03
HRD3YLR207W RNR2P09938 399 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W MRP2P10663 115 aaPredicted RBP2.39□□□□□ -2.03
HRD3YLR207W ARO3P14843 370 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W DBP3P20447 523 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W BOS1P25385 244 aa2.39□□□□□ -2.03
HRD3YLR207W PTC6P25646 442 aa2.39□□□□□ -2.03
HRD3YLR207W CRM1P30822 1084 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W MSS51P32335 436 aa2.39□□□□□ -2.03
HRD3YLR207W OSH3P38713 996 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W UIP3P39547 235 aa2.39□□□□□ -2.03
HRD3YLR207W ECM10P39987 644 aa2.39□□□□□ -2.03
HRD3YLR207W YGL039WP53183 348 aaKnown RBP2.39□□□□□ -2.03
HRD3YLR207W YNL092WP53934 400 aa2.39□□□□□ -2.03
HRD3YLR207W MUK1Q02866 612 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms