RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	BOS1	P25385	244 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	RPS2	P25443	254 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	SRB5	P32585	307 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BYE1	P36106	594 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	RPL32	P38061	130 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	PCF11	P39081	626 aa	Predicted RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	DHH1	P39517	506 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	NDE1	P40215	560 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ARC35	P53731	342 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	YML131W	Q03102	365 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	RSM10	Q03201	203 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	RMT2	Q03305	412 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	GRS2	Q06817	618 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	GPN2	Q08726	347 aa	Predicted RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	CTI6	Q08923	506 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BSC1	Q12140	328 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ATG9	Q12142	997 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BUG1	Q12191	341 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ECM29	P38737	1868 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	YAR066W	P0CX18	203 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	YHR214W	P0CX19	203 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BAR1	P12630	587 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	PUT4	P15380	627 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	OLE1	P21147	510 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	IMG1	P25626	169 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	MSP1	P28737	362 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BRF1	P29056	596 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ARA1	P38115	344 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	NPR3	P38742	1146 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	AXL2	P38928	823 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	FMP10	P40098	244 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
PRP16	YKR086W	YGL114W	P53134	725 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	YTP1	P53584	459 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BOR1	P53838	576 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	CSL4	P53859	292 aa	Predicted RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	NUP100	Q02629	959 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	SMA1	Q02651	245 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	KAP120	Q02932	1032 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	CUE5	Q08412	411 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	YPL272C	Q08984	517 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	BAG7	Q12128	409 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ERP4	Q12450	207 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	GCN4	P03069	281 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	MET17	P06106	444 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	PTR2	P32901	601 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	VPS24	P36095	224 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	MIC60	P36112	540 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	LCB2	P40970	561 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	DPB11	P47027	764 aa	Predicted RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	MRP51	Q02950	344 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	SCW10	Q04951	389 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	ADE13	Q05911	482 aa	Known RBP	0.98	□□□□□ -2.25
PRP16	YKR086W	ATG23	Q06671	453 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	DCI1	Q08558	271 aa		0.98	□□□□□ -2.25
PRP16	YKR086W	GAL80	P04387	435 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	PWP2	P25635	923 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	YIH1	P25637	258 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	GAC1	P28006	793 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	KKQ8	P36004	724 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	MUD2	P36084	527 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	SDS24	P38314	527 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	RTT107	P38850	1070 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	SEC31	P38968	1273 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	RPS10B	P46784	105 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	SMC3	P47037	1230 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	KEL2	P50090	882 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	NBP1	P52919	319 aa	Predicted RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	DRN1	P53255	507 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	HCH1	P53834	153 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	MRPL35	Q06678	367 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	NDE2	Q07500	545 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	INP53	Q12271	1107 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	YPR1	Q12458	312 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	RPL40A	P0CH08	128 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	RPL40B	P0CH09	128 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	RNA14	P25298	677 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	CSM1	P25651	190 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	AFG1	P32317	509 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	MCM10	P32354	571 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	SAC1	P32368	623 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	VPH1	P32563	840 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	YHR054C	P38780	354 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	NPR2	P39923	615 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	YJL070C	P40361	888 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	COS10	P52924	374 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	DUO1	P53168	247 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	HST1	P53685	503 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	NRM1	P53718	249 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	WSC2	P53832	503 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	IMP4	P53941	290 aa	Known RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	EKI1	Q03764	534 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	SPH1	Q06160	661 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	SDH5	Q08230	162 aa		0.97	□□□□□ -2.25
PRP16	YKR086W	FMP40	Q08968	688 aa	Predicted RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	KEL3	Q08979	651 aa	Predicted RBP	0.97	□□□□□ -2.25
PRP16	YKR086W	RPL6B	P05739	176 aa	Known RBP	0.96	□□□□□ -2.26
PRP16	YKR086W	CDC21	P06785	304 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	PPH22	P23595	377 aa		0.96	□□□□□ -2.26
PRP16	YKR086W	HCS1	P34243	683 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 102.6 ms