RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C TAX4P47030 604 aa1.98□□□□□ -2.09
RTT101YJL047C UBX6P47049 396 aa1.98□□□□□ -2.09
RTT101YJL047C HSH155P49955 971 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C YGL108CP53139 140 aa1.98□□□□□ -2.09
RTT101YJL047C EFM5P53200 248 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C RPS15Q01855 142 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C YDR109CQ04585 715 aa1.98□□□□□ -2.09
RTT101YJL047C RXT3Q07458 294 aa1.98□□□□□ -2.09
RTT101YJL047C SMC5Q08204 1093 aa1.98□□□□□ -2.09
RTT101YJL047C BSC6Q08280 497 aa1.98□□□□□ -2.09
RTT101YJL047C NRT1Q08485 598 aa1.98□□□□□ -2.09
RTT101YJL047C SLK19Q08581 821 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C YPL216WQ08964 1102 aa1.98□□□□□ -2.09
RTT101YJL047C PUS9Q12069 462 aa1.98□□□□□ -2.09
RTT101YJL047C RRP12Q12754 1228 aaKnown RBP1.98□□□□□ -2.09
RTT101YJL047C PET111P08468 800 aa1.97□□□□□ -2.09
RTT101YJL047C PRP16P15938 1071 aaPredicted RBP1.97□□□□□ -2.09
RTT101YJL047C HXT2P23585 541 aa1.97□□□□□ -2.09
RTT101YJL047C RVS161P25343 265 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C GID7P25569 745 aa1.97□□□□□ -2.09
RTT101YJL047C PMI40P29952 429 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C YPS1P32329 569 aa1.97□□□□□ -2.09
RTT101YJL047C ACP1P32463 125 aa1.97□□□□□ -2.09
RTT101YJL047C YSC83P32792 385 aa1.97□□□□□ -2.09
RTT101YJL047C RPC34P32910 317 aa1.97□□□□□ -2.09
RTT101YJL047C ADE17P38009 592 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C PPS1P38148 807 aa1.97□□□□□ -2.09
RTT101YJL047C STP2P38704 541 aa1.97□□□□□ -2.09
RTT101YJL047C ALP1P38971 573 aa1.97□□□□□ -2.09
RTT101YJL047C PIG2P40187 538 aa1.97□□□□□ -2.09
RTT101YJL047C FAR3P46671 204 aa1.97□□□□□ -2.09
RTT101YJL047C YJL118WP47022 219 aa1.97□□□□□ -2.09
RTT101YJL047C ASN2P49090 572 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C ERG5P54781 538 aa1.97□□□□□ -2.09
RTT101YJL047C UBP16Q02863 499 aa1.97□□□□□ -2.09
RTT101YJL047C YDR541CQ03049 344 aa1.97□□□□□ -2.09
RTT101YJL047C SRL4Q03085 281 aa1.97□□□□□ -2.09
RTT101YJL047C RLI1Q03195 608 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C SSY1Q03770 852 aa1.97□□□□□ -2.09
RTT101YJL047C COX20Q04935 205 aa1.97□□□□□ -2.09
RTT101YJL047C CTS2Q06350 511 aa1.97□□□□□ -2.09
RTT101YJL047C YDL242WQ07746 117 aa1.97□□□□□ -2.09
RTT101YJL047C TEN1Q07921 160 aa1.97□□□□□ -2.09
RTT101YJL047C RPS10AQ08745 105 aaPredicted RBP1.97□□□□□ -2.09
RTT101YJL047C RKM1Q08961 583 aaPredicted RBP1.97□□□□□ -2.09
RTT101YJL047C LEA1Q08963 238 aaPredicted RBP1.97□□□□□ -2.09
RTT101YJL047C BAG7Q12128 409 aa1.97□□□□□ -2.09
RTT101YJL047C MED4Q12343 284 aa1.97□□□□□ -2.09
RTT101YJL047C TRM13Q12383 476 aa1.97□□□□□ -2.09
RTT101YJL047C TRM11Q12463 433 aa1.97□□□□□ -2.09
RTT101YJL047C LAM4P38800 1345 aa1.97□□□□□ -2.09
RTT101YJL047C HIS5P07172 385 aa1.97□□□□□ -2.09
RTT101YJL047C RIP1P08067 215 aa1.97□□□□□ -2.09
RTT101YJL047C CDC6P09119 513 aa1.97□□□□□ -2.09
RTT101YJL047C SPS4P09937 338 aa1.97□□□□□ -2.09
RTT101YJL047C NFT1P0CE68 1218 aa1.97□□□□□ -2.09
RTT101YJL047C YPK1P12688 680 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C ABF1P14164 731 aa1.97□□□□□ -2.09
RTT101YJL047C GSY2P27472 705 aa1.97□□□□□ -2.09
RTT101YJL047C KRE2P27809 442 aa1.97□□□□□ -2.09
RTT101YJL047C RAD14P28519 371 aa1.97□□□□□ -2.09
RTT101YJL047C SBE22P38814 852 aa1.97□□□□□ -2.09
RTT101YJL047C LNP1P38878 278 aa1.97□□□□□ -2.09
RTT101YJL047C UIP3P39547 235 aa1.97□□□□□ -2.09
RTT101YJL047C YRB2P40517 327 aa1.97□□□□□ -2.09
RTT101YJL047C CHA4P43634 648 aa1.97□□□□□ -2.09
RTT101YJL047C ATG27P46989 271 aa1.97□□□□□ -2.09
RTT101YJL047C FMP33P46998 180 aa1.97□□□□□ -2.09
RTT101YJL047C DSL1P53847 754 aa1.97□□□□□ -2.09
RTT101YJL047C URH1Q04179 340 aa1.97□□□□□ -2.09
RTT101YJL047C RRN11Q04712 507 aa1.97□□□□□ -2.09
RTT101YJL047C GTO3Q04806 366 aa1.97□□□□□ -2.09
RTT101YJL047C YML053CQ04978 212 aa1.97□□□□□ -2.09
RTT101YJL047C YPR078CQ06813 372 aa1.97□□□□□ -2.09
RTT101YJL047C POS5Q06892 414 aa1.97□□□□□ -2.09
RTT101YJL047C MED2Q12124 431 aa1.97□□□□□ -2.09
RTT101YJL047C NPC2Q12408 173 aa1.97□□□□□ -2.09
RTT101YJL047C ATG31Q12421 196 aa1.97□□□□□ -2.09
RTT101YJL047C PAA1Q12447 191 aaKnown RBP1.97□□□□□ -2.09
RTT101YJL047C DCP1Q12517 231 aaPredicted RBP1.97□□□□□ -2.09
RTT101YJL047C CDC21P06785 304 aa1.96□□□□□ -2.09
RTT101YJL047C COR1P07256 457 aa1.96□□□□□ -2.09
RTT101YJL047C SEC63P14906 663 aa1.96□□□□□ -2.09
RTT101YJL047C POL30P15873 258 aaKnown RBP1.96□□□□□ -2.09
RTT101YJL047C DAL2P25335 343 aa1.96□□□□□ -2.09
RTT101YJL047C GAC1P28006 793 aa1.96□□□□□ -2.09
RTT101YJL047C CWP1P28319 239 aa1.96□□□□□ -2.09
RTT101YJL047C LAC1P28496 418 aa1.96□□□□□ -2.09
RTT101YJL047C ECT1P33412 323 aa1.96□□□□□ -2.09
RTT101YJL047C PAD1P33751 242 aaKnown RBP RIP-Chip data1.96□□□□□ -2.09 RIP-Chip
RTT101YJL047C RRP1P35178 278 aaPredicted RBP1.96□□□□□ -2.09
RTT101YJL047C YPT10P38146 199 aa1.96□□□□□ -2.09
RTT101YJL047C QDR3P38227 689 aa1.96□□□□□ -2.09
RTT101YJL047C RRP4P38792 359 aaKnown RBP1.96□□□□□ -2.09
RTT101YJL047C MBB1P39534 108 aa1.96□□□□□ -2.09
RTT101YJL047C ICP55P40051 511 aa1.96□□□□□ -2.09
RTT101YJL047C ATM1P40416 690 aa1.96□□□□□ -2.09
RTT101YJL047C RPS10BP46784 105 aaKnown RBP1.96□□□□□ -2.09
RTT101YJL047C SNG1P46950 547 aa1.96□□□□□ -2.09
RTT101YJL047C VOA1P53262 265 aa1.96□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms