RNA–Protein interactions for RNA: YGR033C

TIM21, Transcript of Nonessential component of the TIM23 complex, yeast

Gene TIM21, Length 720 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM21	YGR033C	PMR1	P13586	950 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	MBR1	P23493	339 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	SIN4	P32259	974 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	RIM1	P32445	135 aa	Known RBP	4.55	□□□□□ -1.68
TIM21	YGR033C	PDR3	P33200	976 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	UIP5	P36137	443 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	PFF1	P38244	976 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	SIF2	P38262	535 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	YSW1	P38280	609 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	TOM71	P38825	639 aa	Known RBP	4.55	□□□□□ -1.68
TIM21	YGR033C	YMR147W	P40218	223 aa	Known RBP	4.55	□□□□□ -1.68
TIM21	YGR033C	CFD1	P40558	293 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	IAH1	P41734	238 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	DSL1	P53847	754 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	YNL181W	P53878	407 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	ECI1	Q05871	280 aa		4.55	□□□□□ -1.68
TIM21	YGR033C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.55	□□□□□ -1.68
TIM21	YGR033C	RPI1	P23250	407 aa	Known RBP	4.54	□□□□□ -1.68
TIM21	YGR033C	RPS2	P25443	254 aa	Known RBP	4.54	□□□□□ -1.68
TIM21	YGR033C	GID7	P25569	745 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	EFM2	P38347	419 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	ERG7	P38604	731 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	GND1	P38720	489 aa	Known RBP	4.54	□□□□□ -1.68
TIM21	YGR033C	GAT1	P43574	510 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	FYV8	P46949	817 aa	Known RBP	4.54	□□□□□ -1.68
TIM21	YGR033C	MDE1	P47095	244 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	YGL082W	P53155	381 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	PIB2	P53191	635 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	GPI1	P53306	609 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	YIF1	P53845	314 aa	Known RBP	4.54	□□□□□ -1.68
TIM21	YGR033C	HSP31	Q04432	237 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	PHO92	Q06390	306 aa		4.54	□□□□□ -1.68
TIM21	YGR033C	PGK1	P00560	416 aa	Known RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	PRP21	P32524	280 aa	Predicted RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	UTR4	P32626	227 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	YNK1	P36010	153 aa	Known RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	ASC1	P38011	319 aa	Known RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	YPK3	P38070	525 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	ADH5	P38113	351 aa	Known RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	RRN10	P38204	145 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	LEU5	P38702	357 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	TOM22	P49334	152 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	YDR415C	Q04033	374 aa	Predicted RBP	4.53	□□□□□ -1.68
TIM21	YGR033C	GSH2	Q08220	491 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	NRT1	Q08485	598 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	ARP6	Q12509	438 aa		4.53	□□□□□ -1.68
TIM21	YGR033C	SUC2	P00724	532 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	SCEI	P03882	235 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	GLK1	P17709	500 aa	Known RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	APE2	P32454	952 aa	Known RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	MRPL4	P36517	319 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	OLA1	P38219	394 aa	Known RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	RRP3	P38712	501 aa	Known RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	PCF11	P39081	626 aa	Predicted RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	RTS2	P40962	232 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	RPN9	Q04062	393 aa	Known RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	YDR387C	Q04162	555 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	MDM30	Q05930	598 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	RKM1	Q08961	583 aa	Predicted RBP	4.52	□□□□□ -1.69
TIM21	YGR033C	REX3	Q12090	404 aa		4.52	□□□□□ -1.69
TIM21	YGR033C	ARO3	P14843	370 aa	Known RBP	4.51	□□□□□ -1.69
TIM21	YGR033C	MGR1	P25573	417 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	VPS17	P32913	551 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	SOR1	P35497	357 aa	Known RBP	4.51	□□□□□ -1.69
TIM21	YGR033C	MLH1	P38920	769 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	YIL089W	P40500	205 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	CHS6	P40955	746 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
TIM21	YGR033C	CUE3	P53137	624 aa	Known RBP	4.51	□□□□□ -1.69
TIM21	YGR033C	MSS11	Q03825	758 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	SPH1	Q06160	661 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	DBP9	Q06218	594 aa	Known RBP	4.51	□□□□□ -1.69
TIM21	YGR033C	SOR2	Q07786	357 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	PML1	Q07930	204 aa	Predicted RBP	4.51	□□□□□ -1.69
TIM21	YGR033C	RRD2	Q12461	358 aa		4.51	□□□□□ -1.69
TIM21	YGR033C	RPL42A	P0CX27	106 aa	Known RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	RPL42B	P0CX28	106 aa	Known RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	SEC62	P21825	274 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	PPZ1	P26570	692 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	PHO91	P27514	894 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	YEL043W	P32618	956 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	RRP4	P38792	359 aa	Known RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	CCT2	P39076	527 aa	Known RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	SAS2	P40963	338 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	YJR011C	P47086	261 aa	Predicted RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	ROG1	P53118	685 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	AQR1	P53943	586 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	SLD5	Q03406	294 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	SEG1	Q04279	960 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	ATX2	Q12067	313 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	LSP1	Q12230	341 aa	Known RBP	4.5	□□□□□ -1.69
TIM21	YGR033C	PSY3	Q12318	242 aa		4.5	□□□□□ -1.69
TIM21	YGR033C	DAP2	P18962	818 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	EXO70	P19658	623 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	HNM1	P19807	563 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	YCR007C	P25354	239 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	GEX1	P25596	615 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	RSM22	P36056	628 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	MIC60	P36112	540 aa		4.49	□□□□□ -1.69
TIM21	YGR033C	OSH3	P38713	996 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms