RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN12, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN12	YFR052W	YPR011C	Q12251	326 aa		4.87	□□□□□ -1.63
RPN12	YFR052W	YDR061W	Q12298	539 aa		4.87	□□□□□ -1.63
RPN12	YFR052W	MDM35	O60200	86 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	RHO2	P06781	192 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	STE3	P06783	470 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	STE4	P18851	423 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	PRP6	P19735	899 aa	Predicted RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	SEC15	P22224	910 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	YCR051W	P25631	222 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	MLS1	P30952	554 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	HXT4	P32467	576 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	SQT1	P35184	431 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	UTP9	P38882	575 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	HXT6	P39003	570 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	HXT7	P39004	570 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	MET30	P39014	640 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	PEX7	P39108	375 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	SPG5	P42933	373 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	MAD3	P47074	515 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	YPT32	P51996	222 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	MDM34	P53083	459 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	YNL260C	P53846	198 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	LSM3	P57743	89 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	MTQ2	Q03920	221 aa	Predicted RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	RRP45	Q05636	305 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	RUD3	Q12234	484 aa	Known RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	RRP42	Q12277	265 aa	Predicted RBP	4.86	□□□□□ -1.63
RPN12	YFR052W	NCA2	Q12374	616 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	SPE4	Q12455	300 aa		4.86	□□□□□ -1.63
RPN12	YFR052W	SPT3	P06844	337 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	RIP1	P08067	215 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	RPS21A	P0C0V8	87 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-DR6	P0CX70	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-ER1	P0CX71	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-LR2	P0CX72	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-PL	P0CX73	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-JR1	P0CX74	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-LR3	P0CX75	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-ML2	P0CX76	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	RSR1	P13856	272 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	NMT1	P14743	455 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	HSC82	P15108	705 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	FUR1	P18562	216 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	PTP1	P25044	335 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	CRM1	P30822	1084 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	PRO1	P32264	428 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	HOG1	P32485	435 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RPN12	YFR052W	LTV1	P34078	463 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	YKL100C	P34248	587 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	YKL077W	P36081	392 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	CBP4	P37267	147 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	RRN10	P38204	145 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	EHT1	P38295	451 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	MGE1	P38523	228 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	SHU2	P38957	223 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	SEC31	P38968	1273 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	GGC1	P38988	300 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	ARB1	P40024	610 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	NDE1	P40215	560 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	CAB2	P40506	365 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	YGL176C	P46945	554 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TEL2	P53038	688 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	ESF2	P53743	316 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	GAS3	Q03655	524 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	SSY1	Q03770	852 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	HDA2	Q06629	674 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	GPB1	Q08886	897 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-GR1	Q12085	440 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	DIN7	Q12086	430 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	YPR022C	Q12139	1133 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	MCD1	Q12158	566 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	YOL107W	Q12239	342 aa		4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	TY1A-OL	Q92392	440 aa	Known RBP	4.85	□□□□□ -1.63
RPN12	YFR052W	LEU4	P06208	619 aa	Known RBP	4.84	□□□□□ -1.63
RPN12	YFR052W	GAL7	P08431	366 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	TRX3	P25372	127 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	BUB3	P26449	341 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	PDR3	P33200	976 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	RMA1	P36001	430 aa	Known RBP	4.84	□□□□□ -1.63
RPN12	YFR052W	KKQ8	P36004	724 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	APT2	P36973	181 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	YHB1	P39676	399 aa	Known RBP	4.84	□□□□□ -1.63
RPN12	YFR052W	YER034W	P40022	185 aa	Known RBP	4.84	□□□□□ -1.63
RPN12	YFR052W	FKH2	P41813	862 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	RCF2	P53721	224 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	YML131W	Q03102	365 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	VHS1	Q03785	461 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	TVP15	Q03860	143 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	SIZ1	Q04195	904 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	ROY1	Q04847	553 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	DIC1	Q06143	298 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	YLR030W	Q07967	263 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	GUP2	Q08929	609 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	SLF1	Q12034	447 aa	Known RBP	4.84	□□□□□ -1.63
RPN12	YFR052W	YLR049C	Q12110	428 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	YVC1	Q12324	675 aa		4.84	□□□□□ -1.63
RPN12	YFR052W	SEC39	Q12745	709 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms