RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W FRE1P32791 686 aa1.17□□□□□ -2.22
SMC1YFL008W MBB1P39534 108 aa1.17□□□□□ -2.22
SMC1YFL008W VPS25P47142 202 aa1.17□□□□□ -2.22
SMC1YFL008W IMD4P50094 524 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W MSO1P53604 210 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W HXT11P54862 567 aa1.17□□□□□ -2.22
SMC1YFL008W FIN1Q03898 291 aa1.17□□□□□ -2.22
SMC1YFL008W CDC45Q08032 650 aa1.17□□□□□ -2.22
SMC1YFL008W RKM1Q08961 583 aaPredicted RBP1.17□□□□□ -2.22
SMC1YFL008W ILV5P06168 395 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W RAD57P25301 460 aa1.17□□□□□ -2.22
SMC1YFL008W PRP21P32524 280 aaPredicted RBP1.17□□□□□ -2.22
SMC1YFL008W SDS24P38314 527 aa1.17□□□□□ -2.22
SMC1YFL008W YIR016WP40572 265 aa1.17□□□□□ -2.22
SMC1YFL008W YPI1P43587 155 aa1.17□□□□□ -2.22
SMC1YFL008W TDA7P53882 636 aaPredicted RBP1.17□□□□□ -2.22
SMC1YFL008W ARX1Q03862 593 aaKnown RBP1.17□□□□□ -2.22
SMC1YFL008W SCW10Q04951 389 aa1.17□□□□□ -2.22
SMC1YFL008W HNT3Q08702 217 aa1.17□□□□□ -2.22
SMC1YFL008W RAD9P14737 1309 aa1.17□□□□□ -2.22
SMC1YFL008W HIP1P06775 603 aa1.16□□□□□ -2.22
SMC1YFL008W REV1P12689 985 aa1.16□□□□□ -2.22
SMC1YFL008W MSS51P32335 436 aa1.16□□□□□ -2.22
SMC1YFL008W MFT1P33441 392 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W LHS1P36016 881 aa1.16□□□□□ -2.22
SMC1YFL008W VPS27P40343 622 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W AAT1Q01802 451 aa1.16□□□□□ -2.22
SMC1YFL008W YLR345WQ06137 509 aa1.16□□□□□ -2.22
SMC1YFL008W YDL121CQ07541 149 aa1.16□□□□□ -2.22
SMC1YFL008W MED1Q12321 566 aa1.16□□□□□ -2.22
SMC1YFL008W CSR2Q12734 1121 aa1.16□□□□□ -2.22
SMC1YFL008W YDL007C-AQ2V2Q0 85 aa1.16□□□□□ -2.22
SMC1YFL008W ADH2P00331 348 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W GDH1P07262 454 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W RIP1P08067 215 aa1.16□□□□□ -2.22
SMC1YFL008W CDC24P11433 854 aaPredicted RBP1.16□□□□□ -2.22
SMC1YFL008W ATR1P13090 542 aa1.16□□□□□ -2.22
SMC1YFL008W PFK2P16862 959 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SMC1YFL008W ART10P18634 518 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W IMG1P25626 169 aa1.16□□□□□ -2.22
SMC1YFL008W CMK1P27466 446 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W KAR9P32526 644 aa1.16□□□□□ -2.22
SMC1YFL008W NPL6P32832 435 aa1.16□□□□□ -2.22
SMC1YFL008W FMS1P50264 508 aa1.16□□□□□ -2.22
SMC1YFL008W MTM1P53320 366 aa1.16□□□□□ -2.22
SMC1YFL008W BSC6Q08280 497 aa1.16□□□□□ -2.22
SMC1YFL008W HXK2P04807 486 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W NDC1P32500 655 aa1.16□□□□□ -2.22
SMC1YFL008W SWD3P38123 315 aa1.16□□□□□ -2.22
SMC1YFL008W MIX23P38162 196 aa1.16□□□□□ -2.22
SMC1YFL008W LAG1P38703 411 aa1.16□□□□□ -2.22
SMC1YFL008W YAT2P40017 923 aa1.16□□□□□ -2.22
SMC1YFL008W KAP123P40069 1113 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W KEG1P43614 200 aa1.16□□□□□ -2.22
SMC1YFL008W RTS3P53289 263 aa1.16□□□□□ -2.22
SMC1YFL008W GRS2Q06817 618 aa1.16□□□□□ -2.22
SMC1YFL008W LEU9Q12166 604 aaKnown RBP1.16□□□□□ -2.22
SMC1YFL008W CYC3P06182 269 aa1.15□□□□□ -2.23
SMC1YFL008W TEF4P36008 412 aaKnown RBP1.15□□□□□ -2.23
SMC1YFL008W PIM1P36775 1133 aa1.15□□□□□ -2.23
SMC1YFL008W MAL33P38157 468 aa1.15□□□□□ -2.23
SMC1YFL008W BZZ1P38822 633 aa1.15□□□□□ -2.23
SMC1YFL008W LNP1P38878 278 aa1.15□□□□□ -2.23
SMC1YFL008W YEL068CP39977 110 aa1.15□□□□□ -2.23
SMC1YFL008W GWT1P47026 490 aa1.15□□□□□ -2.23
SMC1YFL008W IKS1P47042 667 aa1.15□□□□□ -2.23
SMC1YFL008W YEH2Q07950 538 aa1.15□□□□□ -2.23
SMC1YFL008W KRE5P22023 1365 aa1.15□□□□□ -2.23
SMC1YFL008W SSK22P25390 1331 aaPredicted RBP1.15□□□□□ -2.23
SMC1YFL008W YLR302CO13544 120 aa1.15□□□□□ -2.23
SMC1YFL008W CTR86P25355 563 aa1.15□□□□□ -2.23
SMC1YFL008W NAM9P27929 486 aa1.15□□□□□ -2.23
SMC1YFL008W MSP1P28737 362 aa1.15□□□□□ -2.23
SMC1YFL008W SWC3P31376 625 aa1.15□□□□□ -2.23
SMC1YFL008W HXT3P32466 567 aaKnown RBP1.15□□□□□ -2.23
SMC1YFL008W CHS6P40955 746 aa1.15□□□□□ -2.23
SMC1YFL008W TIS11P47977 285 aa1.15□□□□□ -2.23
SMC1YFL008W TOM22P49334 152 aa1.15□□□□□ -2.23
SMC1YFL008W NOP58Q12499 511 aaKnown RBP1.15□□□□□ -2.23
SMC1YFL008W HSP82P02829 709 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W YML002WP0CF17 737 aa1.14□□□□□ -2.23
SMC1YFL008W PUT3P25502 979 aaPredicted RBP1.14□□□□□ -2.23
SMC1YFL008W YIH1P25637 258 aa1.14□□□□□ -2.23
SMC1YFL008W SLC1P33333 303 aa1.14□□□□□ -2.23
SMC1YFL008W PTH2P34222 208 aa1.14□□□□□ -2.23
SMC1YFL008W RPS0BP46654 252 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W TOS2P50078 622 aa1.14□□□□□ -2.23
SMC1YFL008W ALT2P52892 507 aa1.14□□□□□ -2.23
SMC1YFL008W MCP2Q06567 569 aa1.14□□□□□ -2.23
SMC1YFL008W NOP6Q07623 225 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W TAH18Q12181 623 aa1.14□□□□□ -2.23
SMC1YFL008W TOA2P32774 122 aa1.14□□□□□ -2.23
SMC1YFL008W UBP11P36026 717 aa1.14□□□□□ -2.23
SMC1YFL008W RPL32P38061 130 aaKnown RBP1.14□□□□□ -2.23
SMC1YFL008W BUR6P40096 142 aa1.14□□□□□ -2.23
SMC1YFL008W SIM1P40472 476 aa1.14□□□□□ -2.23
SMC1YFL008W AXL1P40851 1208 aa1.14□□□□□ -2.23
SMC1YFL008W YGL108CP53139 140 aa1.14□□□□□ -2.23
SMC1YFL008W YLR152CP54072 576 aa1.14□□□□□ -2.23
SMC1YFL008W TOF2Q02208 771 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms