RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W RER1P25560 188 aa3.08□□□□□ -1.92
PRE1YER012W SYN8P31377 255 aa3.08□□□□□ -1.92
PRE1YER012W MYO3P36006 1272 aa3.08□□□□□ -1.92
PRE1YER012W PMU1P36069 295 aa3.08□□□□□ -1.92
PRE1YER012W TUL1P36096 758 aa3.08□□□□□ -1.92
PRE1YER012W PHO88P38264 188 aaPredicted RBP3.08□□□□□ -1.92
PRE1YER012W GTR1Q00582 310 aa3.08□□□□□ -1.92
PRE1YER012W SNO4Q04902 237 aa3.08□□□□□ -1.92
PRE1YER012W HSP33Q08914 237 aaKnown RBP3.08□□□□□ -1.92
PRE1YER012W HSP32Q08992 237 aa3.08□□□□□ -1.92
PRE1YER012W LEU9Q12166 604 aaKnown RBP3.08□□□□□ -1.92
PRE1YER012W TY3A-GQ12173 290 aa3.08□□□□□ -1.92
PRE1YER012W TY3A-IQ99219 290 aa3.08□□□□□ -1.92
PRE1YER012W RAD61Q99359 647 aa3.08□□□□□ -1.92
PRE1YER012W CAR1P00812 333 aaKnown RBP3.07□□□□□ -1.92
PRE1YER012W FRE1P32791 686 aa3.07□□□□□ -1.92
PRE1YER012W TVP23P38962 199 aa3.07□□□□□ -1.92
PRE1YER012W NOC2P39744 710 aaKnown RBP3.07□□□□□ -1.92
PRE1YER012W VAB2P40003 282 aa3.07□□□□□ -1.92
PRE1YER012W MLC1P53141 149 aa3.07□□□□□ -1.92
PRE1YER012W SUB1P54000 292 aaKnown RBP3.07□□□□□ -1.92
PRE1YER012W YML131WQ03102 365 aa3.07□□□□□ -1.92
PRE1YER012W RCO1Q04779 684 aa3.07□□□□□ -1.92
PRE1YER012W SYO1Q07395 620 aa3.07□□□□□ -1.92
PRE1YER012W BSC6Q08280 497 aa3.07□□□□□ -1.92
PRE1YER012W NKP1Q12493 238 aa3.07□□□□□ -1.92
PRE1YER012W CDC16P09798 840 aa3.06□□□□□ -1.92
PRE1YER012W AMD1P15274 810 aaKnown RBP3.06□□□□□ -1.92
PRE1YER012W PDB1P32473 366 aaKnown RBP3.06□□□□□ -1.92
PRE1YER012W ANP1P32629 500 aa3.06□□□□□ -1.92
PRE1YER012W FAB1P34756 2278 aa3.06□□□□□ -1.92
PRE1YER012W RFS1P38234 210 aaKnown RBP3.06□□□□□ -1.92
PRE1YER012W YBP1P38315 674 aa3.06□□□□□ -1.92
PRE1YER012W YHR131CP38835 850 aa3.06□□□□□ -1.92
PRE1YER012W AXL2P38928 823 aa3.06□□□□□ -1.92
PRE1YER012W SHO1P40073 367 aa3.06□□□□□ -1.92
PRE1YER012W PRE5P40302 234 aaKnown RBP3.06□□□□□ -1.92
PRE1YER012W SCD6P45978 349 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
PRE1YER012W SNG1P46950 547 aa3.06□□□□□ -1.92
PRE1YER012W MYO5Q04439 1219 aaKnown RBP3.06□□□□□ -1.92
PRE1YER012W SPH1Q06160 661 aa3.06□□□□□ -1.92
PRE1YER012W NKP2Q06162 153 aa3.06□□□□□ -1.92
PRE1YER012W YDL121CQ07541 149 aa3.06□□□□□ -1.92
PRE1YER012W ENT4Q07872 247 aa3.06□□□□□ -1.92
PRE1YER012W RIM20Q12033 661 aa3.06□□□□□ -1.92
PRE1YER012W AHC1Q12433 566 aa3.06□□□□□ -1.92
PRE1YER012W NCB2Q92317 146 aa3.06□□□□□ -1.92
PRE1YER012W RIF1P29539 1916 aa3.05□□□□□ -1.92
PRE1YER012W POX1P13711 748 aa3.05□□□□□ -1.92
PRE1YER012W VMA16P23968 213 aa3.05□□□□□ -1.92
PRE1YER012W FUN19P28003 413 aaPredicted RBP3.05□□□□□ -1.92
PRE1YER012W YEL045CP32616 141 aa3.05□□□□□ -1.92
PRE1YER012W UBP11P36026 717 aa3.05□□□□□ -1.92
PRE1YER012W MCR1P36060 302 aaKnown RBP3.05□□□□□ -1.92
PRE1YER012W SHR3Q02774 210 aa3.05□□□□□ -1.92
PRE1YER012W VPS72Q03388 795 aa3.05□□□□□ -1.92
PRE1YER012W YER078W-AQ3E7A2 54 aa3.05□□□□□ -1.92
PRE1YER012W YLR422WQ06409 1932 aa3.04□□□□□ -1.92
PRE1YER012W MAS2P11914 482 aa3.04□□□□□ -1.92
PRE1YER012W DPB3P27344 201 aa3.04□□□□□ -1.92
PRE1YER012W POT1P27796 417 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
PRE1YER012W SAC6P32599 642 aaKnown RBP3.04□□□□□ -1.92
PRE1YER012W YKL100CP34248 587 aa3.04□□□□□ -1.92
PRE1YER012W PSY4P38193 441 aa3.04□□□□□ -1.92
PRE1YER012W REG2P38232 338 aa3.04□□□□□ -1.92
PRE1YER012W RRT2P38332 387 aa3.04□□□□□ -1.92
PRE1YER012W PTR3P43606 678 aa3.04□□□□□ -1.92
PRE1YER012W DRN1P53255 507 aaKnown RBP3.04□□□□□ -1.92
PRE1YER012W MRD1Q06106 887 aaKnown RBP3.04□□□□□ -1.92
PRE1YER012W VIP1Q06685 1146 aaKnown RBP3.04□□□□□ -1.92
PRE1YER012W YDL057WQ07379 328 aa3.04□□□□□ -1.92
PRE1YER012W TMC1Q08422 150 aaPredicted RBP3.04□□□□□ -1.92
PRE1YER012W YOR387CQ08910 206 aa3.04□□□□□ -1.92
PRE1YER012W YDL009CQ12210 107 aa3.04□□□□□ -1.92
PRE1YER012W YOL087CQ99247 1116 aa3.04□□□□□ -1.92
PRE1YER012W PMR1P13586 950 aa3.03□□□□□ -1.92
PRE1YER012W SGF29P25554 259 aa3.03□□□□□ -1.92
PRE1YER012W SSH4P32343 579 aa3.03□□□□□ -1.92
PRE1YER012W SLC1P33333 303 aa3.03□□□□□ -1.92
PRE1YER012W MTC6P38849 526 aa3.03□□□□□ -1.92
PRE1YER012W YER010CP40011 234 aa3.03□□□□□ -1.92
PRE1YER012W MSC1Q03104 513 aa3.03□□□□□ -1.92
PRE1YER012W HNT3Q08702 217 aa3.03□□□□□ -1.92
PRE1YER012W CCH1P50077 2039 aa3.03□□□□□ -1.92
PRE1YER012W PEP5P12868 1029 aa3.02□□□□□ -1.93
PRE1YER012W OPI1P21957 404 aa3.02□□□□□ -1.93
PRE1YER012W MAK31P23059 88 aa3.02□□□□□ -1.93
PRE1YER012W BUD5P25300 642 aaPredicted RBP3.02□□□□□ -1.93
PRE1YER012W ADH7P25377 361 aa3.02□□□□□ -1.93
PRE1YER012W NAM9P27929 486 aa3.02□□□□□ -1.93
PRE1YER012W IMP2'P32351 346 aa3.02□□□□□ -1.93
PRE1YER012W MCM10P32354 571 aa3.02□□□□□ -1.93
PRE1YER012W YBL055CP34220 418 aaPredicted RBP3.02□□□□□ -1.93
PRE1YER012W MAL33P38157 468 aa3.02□□□□□ -1.93
PRE1YER012W ALG8P40351 577 aa3.02□□□□□ -1.93
PRE1YER012W AAD10P47182 288 aa3.02□□□□□ -1.93
PRE1YER012W FMS1P50264 508 aa3.02□□□□□ -1.93
PRE1YER012W MSO1P53604 210 aaKnown RBP3.02□□□□□ -1.93
PRE1YER012W MDM1Q01846 1127 aa3.02□□□□□ -1.93
PRE1YER012W RPT6Q01939 405 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms