RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	RTT101	P47050	842 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	KAP120	Q02932	1032 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	CLB1	P24868	471 aa		4.82	□□□□□ -1.64
RTN1	YDR233C	ERV1	P27882	189 aa		4.82	□□□□□ -1.64
RTN1	YDR233C	DBF4	P32325	704 aa		4.82	□□□□□ -1.64
RTN1	YDR233C	DHH1	P39517	506 aa	Known RBP	4.82	□□□□□ -1.64
RTN1	YDR233C	GWT1	P47026	490 aa		4.82	□□□□□ -1.64
RTN1	YDR233C	FMS1	P50264	508 aa		4.82	□□□□□ -1.64
RTN1	YDR233C	RMD9	P53140	646 aa	Known RBP	4.82	□□□□□ -1.64
RTN1	YDR233C	LEU4	P06208	619 aa	Known RBP	4.81	□□□□□ -1.64
RTN1	YDR233C	EXO70	P19658	623 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	SPC110	P32380	944 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	PRP21	P32524	280 aa	Predicted RBP	4.81	□□□□□ -1.64
RTN1	YDR233C	GYP6	P32806	458 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	PIM1	P36775	1133 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	MTC4	P38335	694 aa	Known RBP	4.81	□□□□□ -1.64
RTN1	YDR233C	GCD10	P41814	478 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	TCB2	P48231	1178 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	RSC1	P53236	928 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	AIM32	Q04689	311 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	YMR317W	Q04893	1140 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	RRP45	Q05636	305 aa	Known RBP	4.81	□□□□□ -1.64
RTN1	YDR233C	VPS74	Q06385	345 aa		4.81	□□□□□ -1.64
RTN1	YDR233C	HOM3	P10869	527 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	MTF1	P14908	341 aa	Known RBP	4.8	□□□□□ -1.64
RTN1	YDR233C	ARA1	P38115	344 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	RFC3	P38629	340 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	SHO1	P40073	367 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	TRS85	P46944	698 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	COS5	P47187	383 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	ERP1	Q05359	219 aa	Known RBP	4.8	□□□□□ -1.64
RTN1	YDR233C	DON1	Q05610	365 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	MDM30	Q05930	598 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	COS7	Q07788	383 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	AYT1	Q12226	474 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	VAM3	Q12241	283 aa		4.8	□□□□□ -1.64
RTN1	YDR233C	SIN4	P32259	974 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	FRE2	P36033	711 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	VHC1	P38329	1120 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	RTT107	P38850	1070 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	YGL138C	P53122	345 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	NCS2	P53923	493 aa	Predicted RBP	4.79	□□□□□ -1.64
RTN1	YDR233C	SKO1	Q02100	647 aa		4.79	□□□□□ -1.64
RTN1	YDR233C	HEM2	P05373	342 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	YML002W	P0CF17	737 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	RNA14	P25298	677 aa	Known RBP	4.78	□□□□□ -1.64
RTN1	YDR233C	KRE2	P27809	442 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	HIR2	P32480	875 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	PMU1	P36069	295 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	CBP4	P37267	147 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	NTC20	P38302	140 aa	Predicted RBP	4.78	□□□□□ -1.64
RTN1	YDR233C	RRT2	P38332	387 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	SRP72	P38688	640 aa	Known RBP	4.78	□□□□□ -1.64
RTN1	YDR233C	RPH1	P39956	796 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	ISC1	P40015	477 aa	Known RBP	4.78	□□□□□ -1.64
RTN1	YDR233C	YAT2	P40017	923 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	SAS2	P40963	338 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	MEP2	P41948	499 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	ZIM17	P42844	174 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	YFR016C	P43597	1233 aa	Known RBP	4.78	□□□□□ -1.64
RTN1	YDR233C	COS10	P52924	374 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	ISA2	Q12425	185 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	SET6	Q12529	373 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	SMC6	Q12749	1114 aa		4.78	□□□□□ -1.64
RTN1	YDR233C	RPL20A	P0CX23	172 aa	Known RBP	4.77	□□□□□ -1.65
RTN1	YDR233C	RPL20B	P0CX24	172 aa	Predicted RBP	4.77	□□□□□ -1.65
RTN1	YDR233C	BEM1	P29366	551 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	ELP2	P42935	788 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	CAK1	P43568	368 aa	Predicted RBP	4.77	□□□□□ -1.65
RTN1	YDR233C	RPS0B	P46654	252 aa	Known RBP	4.77	□□□□□ -1.65
RTN1	YDR233C	YML6	P51998	286 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	CRZ1	P53968	678 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	ACL4	Q03771	387 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	HSP31	Q04432	237 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	MMR1	Q06324	491 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	RKM1	Q08961	583 aa	Predicted RBP	4.77	□□□□□ -1.65
RTN1	YDR233C	YMR230W-A	Q3E7B5	62 aa		4.77	□□□□□ -1.65
RTN1	YDR233C	TFB1	P32776	642 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	REC114	P32841	428 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	SLM4	P38247	162 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	ALG8	P40351	577 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	RRT5	P43607	289 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	AVT4	P50944	713 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	ART5	P53244	586 aa	Known RBP	4.76	□□□□□ -1.65
RTN1	YDR233C	YDR387C	Q04162	555 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	CTF3	Q12748	733 aa		4.76	□□□□□ -1.65
RTN1	YDR233C	URA4	P20051	364 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	CPR2	P23285	205 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	PUT3	P25502	979 aa	Predicted RBP	4.75	□□□□□ -1.65
RTN1	YDR233C	ECM25	P32525	599 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	FMP46	P36141	133 aa	Known RBP	4.75	□□□□□ -1.65
RTN1	YDR233C	YCR041W	P37265	110 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	MDM31	P38880	579 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	ECM27	P47144	725 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	YDL186W	P48568	277 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	PCP1	P53259	346 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	TIP41	Q12199	356 aa		4.75	□□□□□ -1.65
RTN1	YDR233C	ATR1	P13090	542 aa		4.74	□□□□□ -1.65
RTN1	YDR233C	MCK1	P21965	375 aa	Known RBP	4.74	□□□□□ -1.65
RTN1	YDR233C	RHB1	P25378	209 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms