RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W EPL1P43572 832 aa3.7□□□□□ -1.82
TSR1YDL060W ILM1P47155 203 aa3.7□□□□□ -1.82
TSR1YDL060W IMD4P50094 524 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W CUE3P53137 624 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W MLC1P53141 149 aa3.7□□□□□ -1.82
TSR1YDL060W DAK1P54838 584 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W MAK10Q02197 733 aa3.7□□□□□ -1.82
TSR1YDL060W USA1Q03714 838 aa3.7□□□□□ -1.82
TSR1YDL060W COQ11Q05892 277 aa3.7□□□□□ -1.82
TSR1YDL060W ARR2Q06597 130 aa3.7□□□□□ -1.82
TSR1YDL060W ABP140Q08641 628 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W RPN8Q08723 338 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W YPL150WQ12152 901 aa3.7□□□□□ -1.82
TSR1YDL060W LEU9Q12166 604 aaKnown RBP3.7□□□□□ -1.82
TSR1YDL060W SPO12P17123 173 aa3.69□□□□□ -1.82
TSR1YDL060W RFA2P26754 273 aaKnown RBP3.69□□□□□ -1.82
TSR1YDL060W PHO91P27514 894 aa3.69□□□□□ -1.82
TSR1YDL060W ELF1P36053 145 aa3.69□□□□□ -1.82
TSR1YDL060W SWC5P38326 303 aa3.69□□□□□ -1.82
TSR1YDL060W WSS1P38838 269 aa3.69□□□□□ -1.82
TSR1YDL060W PAC2P39937 518 aa3.69□□□□□ -1.82
TSR1YDL060W YIL089WP40500 205 aa3.69□□□□□ -1.82
TSR1YDL060W CHS6P40955 746 aa3.69□□□□□ -1.82
TSR1YDL060W STR3P53101 465 aaKnown RBP3.69□□□□□ -1.82
TSR1YDL060W RPN14P53196 417 aa3.69□□□□□ -1.82
TSR1YDL060W INA17Q02888 182 aa3.69□□□□□ -1.82
TSR1YDL060W ABZ2Q03266 374 aa3.69□□□□□ -1.82
TSR1YDL060W NSE1Q07913 336 aa3.69□□□□□ -1.82
TSR1YDL060W APC5Q08683 685 aa3.69□□□□□ -1.82
TSR1YDL060W RLM1Q12224 676 aa3.69□□□□□ -1.82
TSR1YDL060W GLE1Q12315 538 aa3.69□□□□□ -1.82
TSR1YDL060W RPS19AP07280 144 aaKnown RBP3.69□□□□□ -1.82
TSR1YDL060W RPS19BP07281 144 aaPredicted RBP3.69□□□□□ -1.82
TSR1YDL060W PRR1P28708 518 aa3.69□□□□□ -1.82
TSR1YDL060W RML2P32611 393 aa3.69□□□□□ -1.82
TSR1YDL060W SRB2P34162 210 aa3.69□□□□□ -1.82
TSR1YDL060W YET1P35723 206 aa3.69□□□□□ -1.82
TSR1YDL060W OCT1P35999 772 aa3.69□□□□□ -1.82
TSR1YDL060W AGP2P38090 596 aa3.69□□□□□ -1.82
TSR1YDL060W SLM4P38247 162 aa3.69□□□□□ -1.82
TSR1YDL060W VPS45P38932 577 aa3.69□□□□□ -1.82
TSR1YDL060W SER3P40054 469 aa3.69□□□□□ -1.82
TSR1YDL060W GVP36P40531 326 aaKnown RBP3.69□□□□□ -1.82
TSR1YDL060W MRK1P50873 501 aa3.69□□□□□ -1.82
TSR1YDL060W YKR005CQ02203 525 aa3.69□□□□□ -1.82
TSR1YDL060W PIG1Q06216 648 aa3.69□□□□□ -1.82
TSR1YDL060W VTA1Q06263 330 aa3.69□□□□□ -1.82
TSR1YDL060W DNL4Q08387 944 aaPredicted RBP3.69□□□□□ -1.82
TSR1YDL060W VPS54Q12071 889 aa3.69□□□□□ -1.82
TSR1YDL060W UBX3Q12229 455 aa3.69□□□□□ -1.82
TSR1YDL060W RPL24AP04449 155 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W RPL6BP05739 176 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W ADE5,7P07244 802 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W ARO3P14843 370 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W PDA1P16387 420 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W SAT4P25333 603 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W CRM1P30822 1084 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W MSS1P32559 526 aaPredicted RBP3.68□□□□□ -1.82
TSR1YDL060W MRPL40P36534 297 aa3.68□□□□□ -1.82
TSR1YDL060W PFF1P38244 976 aa3.68□□□□□ -1.82
TSR1YDL060W ARO9P38840 513 aaPredicted RBP3.68□□□□□ -1.82
TSR1YDL060W YNL320WP42840 284 aa3.68□□□□□ -1.82
TSR1YDL060W GCN20P43535 752 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W IRC8P47046 822 aa3.68□□□□□ -1.82
TSR1YDL060W YGR266WP53326 701 aa3.68□□□□□ -1.82
TSR1YDL060W DSL1P53847 754 aa3.68□□□□□ -1.82
TSR1YDL060W YNL144CP53907 740 aa3.68□□□□□ -1.82
TSR1YDL060W RPL6AQ02326 176 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W RRN5Q02983 363 aa3.68□□□□□ -1.82
TSR1YDL060W DIG1Q03063 452 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W YOL075CQ08234 1294 aa3.68□□□□□ -1.82
TSR1YDL060W ACH1P32316 526 aa3.68□□□□□ -1.82
TSR1YDL060W GDA1P32621 518 aa3.68□□□□□ -1.82
TSR1YDL060W FLO10P36170 1169 aa3.68□□□□□ -1.82
TSR1YDL060W YMC2P38087 329 aa3.68□□□□□ -1.82
TSR1YDL060W CCT2P39076 527 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W NPT1P39683 429 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W AVT6P40074 448 aa3.68□□□□□ -1.82
TSR1YDL060W RPS7BP48164 190 aaKnown RBP3.68□□□□□ -1.82
TSR1YDL060W YGR079WP53249 370 aa3.68□□□□□ -1.82
TSR1YDL060W MAL13P53338 473 aa3.68□□□□□ -1.82
TSR1YDL060W VTC3Q02725 835 aa3.68□□□□□ -1.82
TSR1YDL060W YDR278CQ05612 105 aa3.68□□□□□ -1.82
TSR1YDL060W VAC14Q06708 880 aa3.68□□□□□ -1.82
TSR1YDL060W IZH3Q07959 543 aa3.68□□□□□ -1.82
TSR1YDL060W FMP40Q08968 688 aaPredicted RBP3.68□□□□□ -1.82
TSR1YDL060W UBR1P19812 1950 aa3.67□□□□□ -1.82
TSR1YDL060W HIP1P06775 603 aa3.67□□□□□ -1.82
TSR1YDL060W CLN3P13365 580 aa3.67□□□□□ -1.82
TSR1YDL060W HOM2P13663 365 aaKnown RBP3.67□□□□□ -1.82
TSR1YDL060W RSR1P13856 272 aa3.67□□□□□ -1.82
TSR1YDL060W VMA16P23968 213 aa3.67□□□□□ -1.82
TSR1YDL060W UGP1P32861 499 aaKnown RBP3.67□□□□□ -1.82
TSR1YDL060W SEC31P38968 1273 aaKnown RBP3.67□□□□□ -1.82
TSR1YDL060W DSE1P40077 573 aa3.67□□□□□ -1.82
TSR1YDL060W SHQ1P40486 507 aaPredicted RBP3.67□□□□□ -1.82
TSR1YDL060W SWP82P43554 623 aa3.67□□□□□ -1.82
TSR1YDL060W ALK1P43633 760 aaKnown RBP3.67□□□□□ -1.82
TSR1YDL060W IPI3P53877 555 aa3.67□□□□□ -1.82
TSR1YDL060W YNL040WP53960 456 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 279.3 ms