RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W TRE2Q08693 809 aa2.19□□□□□ -2.06
MCD1YDL003W FMP40Q08968 688 aaPredicted RBP2.19□□□□□ -2.06
MCD1YDL003W GET3Q12154 354 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W ATG34Q12292 412 aa2.19□□□□□ -2.06
MCD1YDL003W YRM1Q12340 786 aa2.19□□□□□ -2.06
MCD1YDL003W LAG2Q92325 660 aa2.19□□□□□ -2.06
MCD1YDL003W RSF2P46974 1380 aa2.19□□□□□ -2.06
MCD1YDL003W PAB1P04147 577 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
MCD1YDL003W GPA2P10823 449 aa2.18□□□□□ -2.06
MCD1YDL003W HMG2P12684 1045 aa2.18□□□□□ -2.06
MCD1YDL003W AIM17P23180 465 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W SGV1P23293 657 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W YCP4P25349 247 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W GFD2P25370 566 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W TFC1P32367 649 aa2.18□□□□□ -2.06
MCD1YDL003W ASF2P32448 525 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W NUP2P32499 720 aa2.18□□□□□ -2.06
MCD1YDL003W RPT3P33298 428 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W STB6P36085 766 aa2.18□□□□□ -2.06
MCD1YDL003W UTP30P36144 274 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W CDS1P38221 457 aa2.18□□□□□ -2.06
MCD1YDL003W PFF1P38244 976 aa2.18□□□□□ -2.06
MCD1YDL003W POP7P38291 140 aa2.18□□□□□ -2.06
MCD1YDL003W DIA4P38705 446 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W STL1P39932 569 aa2.18□□□□□ -2.06
MCD1YDL003W PFK26P40433 827 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W AIM23P47015 356 aa2.18□□□□□ -2.06
MCD1YDL003W LIA1P47120 325 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W YJR141WP47172 347 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W DIE2P50076 525 aa2.18□□□□□ -2.06
MCD1YDL003W YGR021WP53212 290 aa2.18□□□□□ -2.06
MCD1YDL003W COG2P53271 262 aa2.18□□□□□ -2.06
MCD1YDL003W VAC7P53950 1165 aa2.18□□□□□ -2.06
MCD1YDL003W RPL15BP54780 204 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W SED5Q01590 340 aa2.18□□□□□ -2.06
MCD1YDL003W SKI8Q02793 397 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W HLR1Q04429 423 aa2.18□□□□□ -2.06
MCD1YDL003W HRD3Q05787 833 aa2.18□□□□□ -2.06
MCD1YDL003W ADE13Q05911 482 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W FAR10Q06001 478 aa2.18□□□□□ -2.06
MCD1YDL003W VPS74Q06385 345 aa2.18□□□□□ -2.06
MCD1YDL003W ARR2Q06597 130 aa2.18□□□□□ -2.06
MCD1YDL003W IWR1Q07532 353 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W PEX15Q08215 383 aa2.18□□□□□ -2.06
MCD1YDL003W CUE5Q08412 411 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W CWC2Q12046 339 aaPredicted RBP2.18□□□□□ -2.06
MCD1YDL003W ATX2Q12067 313 aa2.18□□□□□ -2.06
MCD1YDL003W SPE3Q12074 293 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W HRT3Q12347 344 aa2.18□□□□□ -2.06
MCD1YDL003W ARP7Q12406 477 aa2.18□□□□□ -2.06
MCD1YDL003W SKM1Q12469 655 aa2.18□□□□□ -2.06
MCD1YDL003W ENT1Q12518 454 aa2.18□□□□□ -2.06
MCD1YDL003W RPO21P04050 1733 aaKnown RBP2.18□□□□□ -2.06
MCD1YDL003W DSF1P0CX08 502 aa2.17□□□□□ -2.06
MCD1YDL003W YNR073CP0CX09 502 aa2.17□□□□□ -2.06
MCD1YDL003W RPS24AP0CX31 135 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W RPS24BP0CX32 135 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W CLN3P13365 580 aa2.17□□□□□ -2.06
MCD1YDL003W FBA1P14540 359 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W SEC18P18759 758 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W PRE4P30657 266 aa2.17□□□□□ -2.06
MCD1YDL003W VMA6P32366 345 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W MEI5P32489 222 aa2.17□□□□□ -2.06
MCD1YDL003W FRD1P32614 470 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W VAM7P32912 316 aa2.17□□□□□ -2.06
MCD1YDL003W TAF14P35189 244 aa2.17□□□□□ -2.06
MCD1YDL003W YKL050CP35736 922 aa2.17□□□□□ -2.06
MCD1YDL003W YPK3P38070 525 aa2.17□□□□□ -2.06
MCD1YDL003W VHC1P38329 1120 aa2.17□□□□□ -2.06
MCD1YDL003W POP4P38336 279 aa2.17□□□□□ -2.06
MCD1YDL003W MNN1P39106 762 aa2.17□□□□□ -2.06
MCD1YDL003W SEO1P39709 593 aa2.17□□□□□ -2.06
MCD1YDL003W RPH1P39956 796 aa2.17□□□□□ -2.06
MCD1YDL003W SOK1P40317 901 aa2.17□□□□□ -2.06
MCD1YDL003W HPM1P40481 377 aa2.17□□□□□ -2.06
MCD1YDL003W RTS2P40962 232 aa2.17□□□□□ -2.06
MCD1YDL003W AIP1P46680 615 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W MAD3P47074 515 aa2.17□□□□□ -2.06
MCD1YDL003W BIR1P47134 954 aa2.17□□□□□ -2.06
MCD1YDL003W RPS12P48589 143 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W TAF4P50105 388 aa2.17□□□□□ -2.06
MCD1YDL003W GOR1P53839 350 aa2.17□□□□□ -2.06
MCD1YDL003W COG5P53951 403 aa2.17□□□□□ -2.06
MCD1YDL003W RPS15Q01855 142 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W OSH6Q02201 448 aa2.17□□□□□ -2.06
MCD1YDL003W MRPL13Q02204 264 aa2.17□□□□□ -2.06
MCD1YDL003W PET117Q02771 107 aa2.17□□□□□ -2.06
MCD1YDL003W KAP120Q02932 1032 aa2.17□□□□□ -2.06
MCD1YDL003W UGO1Q03327 502 aa2.17□□□□□ -2.06
MCD1YDL003W YMR010WQ03687 405 aa2.17□□□□□ -2.06
MCD1YDL003W FMN1Q03778 218 aa2.17□□□□□ -2.06
MCD1YDL003W SMP3Q04174 516 aa2.17□□□□□ -2.06
MCD1YDL003W EMI2Q04409 500 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W DPB4Q04603 196 aaKnown RBP2.17□□□□□ -2.06
MCD1YDL003W SWA2Q06677 668 aa2.17□□□□□ -2.06
MCD1YDL003W YPR091CQ06833 770 aa2.17□□□□□ -2.06
MCD1YDL003W NDE2Q07500 545 aa2.17□□□□□ -2.06
MCD1YDL003W YLL007CQ07799 665 aa2.17□□□□□ -2.06
MCD1YDL003W LOT6Q07923 191 aa2.17□□□□□ -2.06
MCD1YDL003W YPR202WQ08993 238 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms