RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C YFR020WP43600 232 aa8.07□□□□□ -1.12
SRP54YPR088C GET1P53192 235 aa8.07□□□□□ -1.12
SRP54YPR088C GIP3Q03016 1276 aa8.07□□□□□ -1.12
SRP54YPR088C SPC2Q04969 178 aa8.07□□□□□ -1.12
SRP54YPR088C TFB4Q12004 338 aa8.07□□□□□ -1.12
SRP54YPR088C MDM35O60200 86 aa8.06□□□□□ -1.12
SRP54YPR088C RAS2P01120 322 aaKnown RBP8.06□□□□□ -1.12
SRP54YPR088C FUN30P31380 1131 aa8.06□□□□□ -1.12
SRP54YPR088C ATO2P32907 282 aa8.06□□□□□ -1.12
SRP54YPR088C EMC3P36039 253 aa8.06□□□□□ -1.12
SRP54YPR088C SRX1P36077 127 aa8.06□□□□□ -1.12
SRP54YPR088C MRPL37P36532 105 aa8.06□□□□□ -1.12
SRP54YPR088C AXL2P38928 823 aa8.06□□□□□ -1.12
SRP54YPR088C GGC1P38988 300 aa8.06□□□□□ -1.12
SRP54YPR088C CAB2P40506 365 aa8.06□□□□□ -1.12
SRP54YPR088C SEC26P41810 973 aaKnown RBP8.06□□□□□ -1.12
SRP54YPR088C TY4A-JP47023 414 aa8.06□□□□□ -1.12
SRP54YPR088C AIM22P47051 409 aa8.06□□□□□ -1.12
SRP54YPR088C UPF3P48412 387 aaKnown RBP8.06□□□□□ -1.12
SRP54YPR088C YNL140CP53910 189 aa8.06□□□□□ -1.12
SRP54YPR088C BSC2Q05611 235 aa8.06□□□□□ -1.12
SRP54YPR088C YHC1Q05900 231 aaKnown RBP8.06□□□□□ -1.12
SRP54YPR088C RTT10Q08924 1013 aa8.06□□□□□ -1.12
SRP54YPR088C NMD4Q12129 218 aa8.06□□□□□ -1.12
SRP54YPR088C COX3P00420 269 aa8.05□□□□□ -1.12
SRP54YPR088C ARG3P05150 338 aa8.05□□□□□ -1.12
SRP54YPR088C ERG6P25087 383 aaKnown RBP8.05□□□□□ -1.12
SRP54YPR088C PFS1P38872 237 aa8.05□□□□□ -1.12
SRP54YPR088C TIF34P40217 347 aaKnown RBP8.05□□□□□ -1.12
SRP54YPR088C GAB1P41733 394 aa8.05□□□□□ -1.12
SRP54YPR088C GMC2Q06201 188 aa8.05□□□□□ -1.12
SRP54YPR088C RUP1Q12242 671 aa8.05□□□□□ -1.12
SRP54YPR088C YLL054CQ12244 843 aa8.05□□□□□ -1.12
SRP54YPR088C HRP1Q99383 534 aaKnown RBP8.05□□□□□ -1.12
SRP54YPR088C THP2O13539 261 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C ARG81P05085 880 aa8.04□□□□□ -1.12
SRP54YPR088C MSS18P08593 268 aa8.04□□□□□ -1.12
SRP54YPR088C PRI2P20457 528 aa8.04□□□□□ -1.12
SRP54YPR088C RVS161P25343 265 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C TRX3P25372 127 aa8.04□□□□□ -1.12
SRP54YPR088C VPS21P36017 210 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C TRM7P38238 310 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C WSC4P38739 605 aa8.04□□□□□ -1.12
SRP54YPR088C RGI1P40043 161 aaPredicted RBP8.04□□□□□ -1.12
SRP54YPR088C SSU1P41930 458 aa8.04□□□□□ -1.12
SRP54YPR088C FMP32P43557 207 aa8.04□□□□□ -1.12
SRP54YPR088C NOP9P47077 666 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C KXD1P53158 218 aa8.04□□□□□ -1.12
SRP54YPR088C YNL033WP53964 284 aa8.04□□□□□ -1.12
SRP54YPR088C YNL019CP53975 284 aa8.04□□□□□ -1.12
SRP54YPR088C EAF1Q06337 982 aa8.04□□□□□ -1.12
SRP54YPR088C RPN5Q12250 445 aaKnown RBP8.04□□□□□ -1.12
SRP54YPR088C TY4A-HQ6Q5P6 413 aa8.04□□□□□ -1.12
SRP54YPR088C RPS21AP0C0V8 87 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C KAR1P11927 433 aa8.03□□□□□ -1.12
SRP54YPR088C RAP1P11938 827 aa8.03□□□□□ -1.12
SRP54YPR088C UGA1P17649 471 aa8.03□□□□□ -1.12
SRP54YPR088C DPH5P32469 300 aaPredicted RBP8.03□□□□□ -1.12
SRP54YPR088C NGG1P32494 702 aa8.03□□□□□ -1.12
SRP54YPR088C RPT5P33297 434 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C YKR078WP36158 585 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C PDX3P38075 228 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C COS111P38308 924 aa8.03□□□□□ -1.12
SRP54YPR088C TDP1P38319 544 aa8.03□□□□□ -1.12
SRP54YPR088C ATG7P38862 630 aa8.03□□□□□ -1.12
SRP54YPR088C YIL108WP40483 696 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C FMP33P46998 180 aa8.03□□□□□ -1.12
SRP54YPR088C SGF73P53165 657 aa8.03□□□□□ -1.12
SRP54YPR088C YGR016WP53209 190 aa8.03□□□□□ -1.12
SRP54YPR088C GPI1P53306 609 aa8.03□□□□□ -1.12
SRP54YPR088C SVL3Q03088 825 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C CTK1Q03957 528 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C RAD33Q04231 177 aa8.03□□□□□ -1.12
SRP54YPR088C PFA4Q12006 378 aa8.03□□□□□ -1.12
SRP54YPR088C RPN6Q12377 434 aa8.03□□□□□ -1.12
SRP54YPR088C STT4P37297 1900 aa8.03□□□□□ -1.12
SRP54YPR088C ATP4P05626 244 aa8.03□□□□□ -1.12
SRP54YPR088C LAT1P12695 482 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C MRP8P35719 219 aa8.03□□□□□ -1.12
SRP54YPR088C KKQ8P36004 724 aa8.03□□□□□ -1.12
SRP54YPR088C UBP14P38237 781 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C FAD1P38913 306 aa8.03□□□□□ -1.12
SRP54YPR088C PCF11P39081 626 aaPredicted RBP8.03□□□□□ -1.12
SRP54YPR088C DSS1P39112 969 aa8.03□□□□□ -1.12
SRP54YPR088C MNN10P50108 393 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C YNR021WP53723 404 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C GOR1P53839 350 aa8.03□□□□□ -1.12
SRP54YPR088C NAN1Q02931 896 aaKnown RBP8.03□□□□□ -1.12
SRP54YPR088C YMR010WQ03687 405 aa8.03□□□□□ -1.12
SRP54YPR088C MUS81Q04149 632 aaPredicted RBP8.03□□□□□ -1.12
SRP54YPR088C YOL159CQ08300 171 aa8.03□□□□□ -1.12
SRP54YPR088C HAL9Q12180 1030 aa8.03□□□□□ -1.12
SRP54YPR088C GPR1Q12361 961 aa8.03□□□□□ -1.12
SRP54YPR088C LEU4P06208 619 aaKnown RBP8.02□□□□□ -1.13
SRP54YPR088C YAK1P14680 807 aa8.02□□□□□ -1.13
SRP54YPR088C SIS1P25294 352 aaKnown RBP8.02□□□□□ -1.13
SRP54YPR088C SLM5P25345 492 aaKnown RBP8.02□□□□□ -1.13
SRP54YPR088C PET309P32522 965 aaPredicted RBP8.02□□□□□ -1.13
SRP54YPR088C TFB1P32776 642 aa8.02□□□□□ -1.13
SRP54YPR088C PEX6P33760 1030 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms