RNA–Protein interactions for RNA: YPR030W

CSR2, Transcript of Nuclear ubiquitin protein ligase binding protein, yeast

Gene CSR2, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cellular bud, Mitochondria .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSR2	YPR030W	PET117	Q02771	107 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	TRM12	Q04235	462 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	MRX10	Q05648	414 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GPI11	Q06636	219 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SKI7	Q08491	747 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	MLH3	Q12083	715 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	APC9	Q12107	265 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	DGK1	Q12382	290 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YKL018C-A	Q3E7A7	99 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GCN4	P03069	281 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	PHO80	P20052	293 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	KRR1	P25586	316 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	FRE1	P32791	686 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	CDC13	P32797	924 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	JEN1	P36035	616 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YKR051W	P36142	418 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GPT2	P36148	743 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YHR078W	P38799	552 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	KHA1	P40309	873 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YIL024C	P40543	189 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	ACF4	P47129	309 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GCV1	P48015	400 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	ARE2	P53629	642 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	FPK1	P53739	893 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	TGL2	P54857	326 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	NAM8	Q00539	523 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	YPL071C	Q02864	156 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	ELP3	Q02908	557 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	TRS130	Q03660	1102 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YDR131C	Q03899	556 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	DOT1	Q04089	582 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	YDR514C	Q04408	483 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	PMT7	Q06644	662 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	ATG20	Q07528	640 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YOL159C	Q08300	171 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YPL191C	Q08930	360 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	HOS1	Q12214	470 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	CLN2	P20438	545 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SAR1	P20606	190 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	FPS1	P23900	669 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	EMC1	P25574	760 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	HYM1	P32464	399 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	KAP122	P32767	1081 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	MDL2	P33311	773 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SDS22	P36047	338 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	SSY5	P47002	699 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	YJR120W	P47157	116 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	MTR3	P48240	250 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	PRP38	Q00723	242 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	YMR279C	Q03263	540 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	GUD1	Q07729	489 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	UAF30	Q08747	228 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	PGC1	Q08959	321 aa		3.11	□□□□□ -1.91
CSR2	YPR030W	TYW1	Q08960	810 aa	Known RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	KEL3	Q08979	651 aa	Predicted RBP	3.11	□□□□□ -1.91
CSR2	YPR030W	CWH43	P25618	953 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	VPH1	P32563	840 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	RPT1	P33299	467 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	MSC7	P38694	644 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	AIM18	P38884	321 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	UTP18	P40362	594 aa	Predicted RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	COA1	P40452	197 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	RAD17	P48581	401 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	APP1	P53933	587 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	MET14	Q02196	202 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YMR155W	Q03795	547 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YDR286C	Q05530	114 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	DUS4	Q06063	367 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YLR345W	Q06137	509 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YLR326W	Q06170	240 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	YLR446W	Q06204	433 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	WTM1	Q12363	437 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	PSF1	Q12488	208 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	IZH4	Q99393	312 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YBR085C-A	O43137	85 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	INH1	P01097	85 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	ATP1	P07251	545 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	NHP6B	P11633	99 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	MET16	P18408	261 aa	Predicted RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	ESS1	P22696	170 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	PUP3	P25451	205 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	VAC17	P25591	423 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	DPH2	P32461	534 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	COT1	P32798	439 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	MRS6	P32864	603 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	VPS51	P36116	164 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	CAF4	P36130	643 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	ERV15	P38312	142 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YHR182W	P38870	785 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	MLH1	P38920	769 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YER184C	P39961	794 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	EMP65	P40085	556 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	YJL171C	P46992	396 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	PYK2	P52489	506 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	MAL11	P53048	616 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	RPT4	P53549	437 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	ALG11	P53954	548 aa	Known RBP	3.1	□□□□□ -1.91
CSR2	YPR030W	SND1	Q04007	877 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	SIZ1	Q04195	904 aa		3.1	□□□□□ -1.91
CSR2	YPR030W	DUS3	Q06053	668 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms