RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	ALG12	P53730	551 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	MOT3	P54785	490 aa	Known RBP	4.9	□□□□□ -1.63
SSO1	YPL232W	YPL068C	Q02749	293 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	GLO2	Q05584	274 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	SYT1	Q06836	1226 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	CYK3	Q07533	885 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	RCN2	Q12044	265 aa		4.9	□□□□□ -1.63
SSO1	YPL232W	BRR1	Q99177	341 aa	Predicted RBP	4.9	□□□□□ -1.63
SSO1	YPL232W	STE2	D6VTK4	431 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	REC107	P21651	314 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	STP22	P25604	385 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	DCG1	P32460	244 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	ERG1	P32476	496 aa	Known RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	SUI1	P32911	108 aa	Known RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	VPS52	P39904	641 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	CEP3	P40969	608 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	AZF1	P41696	914 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	VMA13	P41807	478 aa	Known RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	MET12	P46151	657 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	TIS11	P47977	285 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	RTA1	P53047	317 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	PBP1	P53297	722 aa	Known RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	ATG21	Q02887	496 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	BCH1	Q05029	724 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	UTP13	Q05946	817 aa	Known RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	REX3	Q12090	404 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	RRP42	Q12277	265 aa	Predicted RBP	4.89	□□□□□ -1.63
SSO1	YPL232W	YOR032W-A	Q8TGS1	66 aa		4.89	□□□□□ -1.63
SSO1	YPL232W	STE3	P06783	470 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	RSR1	P13856	272 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	CDC12	P32468	407 aa	Known RBP	4.88	□□□□□ -1.63
SSO1	YPL232W	ALG3	P38179	458 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	EFM1	P38732	585 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	YHI9	P38765	294 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	NPT1	P39683	429 aa	Known RBP	4.88	□□□□□ -1.63
SSO1	YPL232W	FRT2	P39734	528 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	HAT2	P39984	401 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	TPA1	P40032	644 aa	Known RBP	4.88	□□□□□ -1.63
SSO1	YPL232W	GIP2	P40036	548 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	SEH1	P53011	349 aa	Known RBP	4.88	□□□□□ -1.63
SSO1	YPL232W	MAL11	P53048	616 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	ALF1	P53904	254 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	SDH1	Q00711	640 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	OAZ1	Q02803	292 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	RGT2	Q12300	763 aa		4.88	□□□□□ -1.63
SSO1	YPL232W	SEC53	P07283	254 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	RPS21A	P0C0V8	87 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	HMG1	P12683	1054 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	MSS116	P15424	664 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	CDC20	P26309	610 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	CMK1	P27466	446 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	URA10	P30402	227 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	CDC5	P32562	705 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	RSM22	P36056	628 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	MRPL10	P36520	322 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	YBR062C	P38239	180 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	MSG5	P38590	489 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	SPC97	P38863	823 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	FMP52	P40008	231 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	NEO1	P40527	1151 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	APQ12	P40532	138 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	RPL10	P41805	221 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	SPT20	P50875	604 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	ROG1	P53118	685 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	MTG1	Q03151	367 aa	Predicted RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	TDA9	Q04545	1251 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	BOP2	Q06150	570 aa		4.87	□□□□□ -1.63
SSO1	YPL232W	PAR32	Q12515	295 aa	Known RBP	4.87	□□□□□ -1.63
SSO1	YPL232W	MDN1	Q12019	4910 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	COR1	P07256	457 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	HXT4	P32467	576 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	OMA1	P36163	345 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	APT2	P36973	181 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	ASC1	P38011	319 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	YBR071W	P38243	211 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	HXT6	P39003	570 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	HXT7	P39004	570 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	SEC27	P41811	889 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	SNO3	P43544	222 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	NUP42	P49686	430 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	MUP1	P50276	574 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	BOL2	P53082	120 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	RIM8	P53179	542 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	CDC123	Q05791	360 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	RRP40	Q08285	240 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	CUE5	Q08412	411 aa	Known RBP	4.86	□□□□□ -1.63
SSO1	YPL232W	MCH5	Q08777	521 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	APL4	Q12028	832 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	PUS9	Q12069	462 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	BPH1	P25356	2167 aa		4.86	□□□□□ -1.63
SSO1	YPL232W	GUK1	P15454	187 aa	Known RBP	4.85	□□□□□ -1.63
SSO1	YPL232W	GAS1	P22146	559 aa	Known RBP	4.85	□□□□□ -1.63
SSO1	YPL232W	MLS1	P30952	554 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	YKL100C	P34248	587 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	MDJ1	P35191	511 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	OAR1	P35731	278 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	DHR2	P36009	735 aa	Predicted RBP	4.85	□□□□□ -1.63
SSO1	YPL232W	POP4	P38336	279 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	FAD1	P38913	306 aa		4.85	□□□□□ -1.63
SSO1	YPL232W	EMP65	P40085	556 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms