RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	RPI1	P23250	407 aa	Known RBP	7	□□□□□ -1.29
MSB3	YNL293W	GFD2	P25370	566 aa	Known RBP	7	□□□□□ -1.29
MSB3	YNL293W	YDJ1	P25491	409 aa	Known RBP	7	□□□□□ -1.29
MSB3	YNL293W	SIP1	P32578	815 aa		7	□□□□□ -1.29
MSB3	YNL293W	CYS4	P32582	507 aa	Known RBP	7	□□□□□ -1.29
MSB3	YNL293W	AIM29	P36154	155 aa		7	□□□□□ -1.29
MSB3	YNL293W	POA1	P38218	177 aa		7	□□□□□ -1.29
MSB3	YNL293W	YHR054C	P38780	354 aa		7	□□□□□ -1.29
MSB3	YNL293W	SUR2	P38992	349 aa		7	□□□□□ -1.29
MSB3	YNL293W	MND2	P40577	368 aa		7	□□□□□ -1.29
MSB3	YNL293W	HOC1	P47124	396 aa		7	□□□□□ -1.29
MSB3	YNL293W	NCS6	P53088	359 aa		7	□□□□□ -1.29
MSB3	YNL293W	SWC4	P53201	476 aa		7	□□□□□ -1.29
MSB3	YNL293W	NOP19	P53317	196 aa	Predicted RBP	7	□□□□□ -1.29
MSB3	YNL293W	HHO1	P53551	258 aa		7	□□□□□ -1.29
MSB3	YNL293W	TEP1	P53916	434 aa		7	□□□□□ -1.29
MSB3	YNL293W	PEX25	Q02969	394 aa		7	□□□□□ -1.29
MSB3	YNL293W	PFA5	Q03289	374 aa		7	□□□□□ -1.29
MSB3	YNL293W	TDA9	Q04545	1251 aa		7	□□□□□ -1.29
MSB3	YNL293W	YLR297W	Q05899	129 aa		7	□□□□□ -1.29
MSB3	YNL293W	ACM1	Q08981	209 aa		7	□□□□□ -1.29
MSB3	YNL293W	YOR114W	Q12219	294 aa		7	□□□□□ -1.29
MSB3	YNL293W	SPO14	P36126	1683 aa		7	□□□□□ -1.29
MSB3	YNL293W	YBR085C-A	O43137	85 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	RPL4A	P10664	362 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	IDI1	P15496	288 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	MRPL44	P19956	98 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	CBP3	P21560	335 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	YCK1	P23291	538 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HCM1	P25364	564 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	LDS1	P31379	325 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HMX1	P32339	317 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	CTF13	P35203	478 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	PHO11	P35842	467 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	YBL036C	P38197	257 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	ERV15	P38312	142 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	PHO12	P38693	467 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	LSM4	P40070	187 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	YKE4	P40544	346 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	DUG1	P43616	481 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	EFM3	P47163	339 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	RPL4B	P49626	362 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	UFD1	P53044	361 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SLD3	P53135	668 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	YGR042W	P53227	271 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SOK2	P53438	785 aa	Predicted RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	ESF1	Q06344	628 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	SMF3	Q12078	473 aa	Predicted RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	TPK2	P06245	380 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HIS5	P07172	385 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	ARG80	P07249	177 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	RPS18A	P0CX55	146 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	RPS18B	P0CX56	146 aa	Predicted RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	PHO81	P17442	1178 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	DAL81	P21657	970 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SIR1	P21691	654 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	DBP1	P24784	617 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	COQ2	P32378	372 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HIR1	P32479	840 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	YGL015C	P33199	130 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SPO23	P33757	523 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	RMA1	P36001	430 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	MMS4	P38257	691 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SLI15	P38283	698 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	FAA2	P39518	744 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HXT14	P42833	540 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	YJL107C	P42947	387 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	LOH1	P47055	219 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	CPR7	P47103	393 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	SLX9	P53251	210 aa	Predicted RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	YGR127W	P53275	312 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
MSB3	YNL293W	APC4	Q04601	652 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	RFU1	Q08003	200 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	HFI1	Q12060	488 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	MDM12	Q92328	271 aa		6.99	□□□□□ -1.29
MSB3	YNL293W	FAS2	P19097	1887 aa	Known RBP	6.99	□□□□□ -1.29
MSB3	YNL293W	NUP188	P52593	1655 aa	Known RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	BAR1	P12630	587 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	CAP2	P13517	287 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	SPO16	P17122	198 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	MCM5	P29496	775 aa	Known RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	YBR056W	P38081	501 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	LCP5	P40079	357 aa	Predicted RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	DOT5	P40553	215 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	REF2	P42073	533 aa	Predicted RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	SAD1	P43589	448 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	AMA1	P50082	593 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	YML6	P51998	286 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	PIB2	P53191	635 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	ARK1	P53974	638 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	YNL010W	P53981	241 aa	Known RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	HXT15	P54854	567 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	TRS130	Q03660	1102 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	AIM36	Q03798	255 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	SND1	Q04007	877 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	YOR238W	Q08634	303 aa		6.98	□□□□□ -1.29
MSB3	YNL293W	YOR283W	Q12040	230 aa	Known RBP	6.98	□□□□□ -1.29
MSB3	YNL293W	HTB1	P02293	131 aa	Known RBP	6.97	□□□□□ -1.29
MSB3	YNL293W	HTB2	P02294	131 aa		6.97	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms