RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C YDR239CQ03780 787 aa2.25□□□□□ -2.05
VTI1YMR197C BUD22Q04347 519 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C ROY1Q04847 553 aa2.25□□□□□ -2.05
VTI1YMR197C RQC1Q05468 723 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C VPS38Q05919 439 aa2.25□□□□□ -2.05
VTI1YMR197C SPE3Q12074 293 aaKnown RBP2.25□□□□□ -2.05
VTI1YMR197C SPE4Q12455 300 aa2.25□□□□□ -2.05
VTI1YMR197C CTF3Q12748 733 aa2.25□□□□□ -2.05
VTI1YMR197C YOR019WQ99248 730 aa2.25□□□□□ -2.05
VTI1YMR197C YPT6Q99260 215 aa2.25□□□□□ -2.05
VTI1YMR197C CLC1P17891 233 aa2.24□□□□□ -2.05
VTI1YMR197C PHO84P25297 587 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C ERV1P27882 189 aa2.24□□□□□ -2.05
VTI1YMR197C SYN8P31377 255 aa2.24□□□□□ -2.05
VTI1YMR197C AGA1P32323 725 aa2.24□□□□□ -2.05
VTI1YMR197C SRB5P32585 307 aa2.24□□□□□ -2.05
VTI1YMR197C SSE1P32589 693 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C GYP6P32806 458 aa2.24□□□□□ -2.05
VTI1YMR197C RIB7P33312 244 aa2.24□□□□□ -2.05
VTI1YMR197C MIA40P36046 403 aa2.24□□□□□ -2.05
VTI1YMR197C CMC1P36064 111 aa2.24□□□□□ -2.05
VTI1YMR197C PHD1P36093 366 aa2.24□□□□□ -2.05
VTI1YMR197C DAD2P36162 133 aa2.24□□□□□ -2.05
VTI1YMR197C SIF2P38262 535 aa2.24□□□□□ -2.05
VTI1YMR197C SEC24P40482 926 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C PKP1P40530 394 aa2.24□□□□□ -2.05
VTI1YMR197C YJL213WP40896 331 aa2.24□□□□□ -2.05
VTI1YMR197C CAK1P43568 368 aaPredicted RBP2.24□□□□□ -2.05
VTI1YMR197C RPN11P43588 306 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C DLD2P46681 530 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C IKS1P47042 667 aa2.24□□□□□ -2.05
VTI1YMR197C STR3P53101 465 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C TWF1P53250 332 aa2.24□□□□□ -2.05
VTI1YMR197C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
VTI1YMR197C KAP120Q02932 1032 aa2.24□□□□□ -2.05
VTI1YMR197C TLG1Q03322 224 aa2.24□□□□□ -2.05
VTI1YMR197C ARX1Q03862 593 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C MRD1Q06106 887 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C YLR456WQ06199 204 aa2.24□□□□□ -2.05
VTI1YMR197C CFT2Q12102 859 aaPredicted RBP2.24□□□□□ -2.05
VTI1YMR197C RPN5Q12250 445 aaKnown RBP2.24□□□□□ -2.05
VTI1YMR197C CEX1Q12453 761 aa2.24□□□□□ -2.05
VTI1YMR197C AVL9Q12500 764 aa2.24□□□□□ -2.05
VTI1YMR197C INO80P53115 1489 aa2.24□□□□□ -2.05
VTI1YMR197C GAL80P04387 435 aa2.23□□□□□ -2.05
VTI1YMR197C RPL15AP05748 204 aaKnown RBP2.23□□□□□ -2.05
VTI1YMR197C VMA16P23968 213 aa2.23□□□□□ -2.05
VTI1YMR197C DAL80P26343 269 aa2.23□□□□□ -2.05
VTI1YMR197C ACH1P32316 526 aa2.23□□□□□ -2.05
VTI1YMR197C YEL043WP32618 956 aa2.23□□□□□ -2.05
VTI1YMR197C PMT1P33775 817 aa2.23□□□□□ -2.05
VTI1YMR197C LTV1P34078 463 aa2.23□□□□□ -2.05
VTI1YMR197C SEF1P34228 1148 aa2.23□□□□□ -2.05
VTI1YMR197C HEL1P36113 551 aa2.23□□□□□ -2.05
VTI1YMR197C PCA1P38360 1216 aa2.23□□□□□ -2.05
VTI1YMR197C YNG2P38806 282 aaKnown RBP2.23□□□□□ -2.05
VTI1YMR197C WSS1P38838 269 aa2.23□□□□□ -2.05
VTI1YMR197C CCT6P39079 546 aa2.23□□□□□ -2.05
VTI1YMR197C RPH1P39956 796 aa2.23□□□□□ -2.05
VTI1YMR197C SGN1P40561 250 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
VTI1YMR197C HXT14P42833 540 aa2.23□□□□□ -2.05
VTI1YMR197C PET130P47065 347 aa2.23□□□□□ -2.05
VTI1YMR197C LYS4P49367 693 aaPredicted RBP2.23□□□□□ -2.05
VTI1YMR197C MNP1P53163 194 aaPredicted RBP2.23□□□□□ -2.05
VTI1YMR197C YGR111WP53265 400 aa2.23□□□□□ -2.05
VTI1YMR197C RPA49Q01080 415 aaPredicted RBP2.23□□□□□ -2.05
VTI1YMR197C RBA50Q04418 439 aa2.23□□□□□ -2.05
VTI1YMR197C MGR3Q04472 501 aa2.23□□□□□ -2.05
VTI1YMR197C HCR1Q05775 265 aaKnown RBP2.23□□□□□ -2.05
VTI1YMR197C SPH1Q06160 661 aa2.23□□□□□ -2.05
VTI1YMR197C VTA1Q06263 330 aa2.23□□□□□ -2.05
VTI1YMR197C MMR1Q06324 491 aa2.23□□□□□ -2.05
VTI1YMR197C YEH2Q07950 538 aa2.23□□□□□ -2.05
VTI1YMR197C YOL159CQ08300 171 aa2.23□□□□□ -2.05
VTI1YMR197C DCI1Q08558 271 aa2.23□□□□□ -2.05
VTI1YMR197C RDR1Q08904 546 aa2.23□□□□□ -2.05
VTI1YMR197C FMP40Q08968 688 aaPredicted RBP2.23□□□□□ -2.05
VTI1YMR197C MDY2Q12285 212 aa2.23□□□□□ -2.05
VTI1YMR197C ISN1Q99312 450 aa2.23□□□□□ -2.05
VTI1YMR197C YML133CQ03099 1374 aa2.23□□□□□ -2.05
VTI1YMR197C YLL067CQ07888 1374 aa2.23□□□□□ -2.05
VTI1YMR197C YLL066CQ99208 1374 aa2.23□□□□□ -2.05
VTI1YMR197C RPL6BP05739 176 aaKnown RBP2.22□□□□□ -2.05
VTI1YMR197C ARD1P07347 238 aaPredicted RBP2.22□□□□□ -2.05
VTI1YMR197C RPL3P14126 387 aaKnown RBP2.22□□□□□ -2.05
VTI1YMR197C EST1P17214 699 aaPredicted RBP2.22□□□□□ -2.05
VTI1YMR197C GRR1P24814 1151 aa2.22□□□□□ -2.05
VTI1YMR197C ATS1P31386 333 aa2.22□□□□□ -2.05
VTI1YMR197C PDB1P32473 366 aaKnown RBP2.22□□□□□ -2.05
VTI1YMR197C SUR1P33300 382 aa2.22□□□□□ -2.05
VTI1YMR197C NIP100P33420 868 aa2.22□□□□□ -2.05
VTI1YMR197C HCS1P34243 683 aa2.22□□□□□ -2.05
VTI1YMR197C GDT1P38301 280 aaPredicted RBP2.22□□□□□ -2.05
VTI1YMR197C RRT2P38332 387 aa2.22□□□□□ -2.05
VTI1YMR197C OSW5P40219 148 aa2.22□□□□□ -2.05
VTI1YMR197C ALG5P40350 334 aa2.22□□□□□ -2.05
VTI1YMR197C YJL132WP47014 750 aa2.22□□□□□ -2.05
VTI1YMR197C SOL4P53315 255 aa2.22□□□□□ -2.05
VTI1YMR197C YNR068CP53754 272 aa2.22□□□□□ -2.05
VTI1YMR197C ERV25P54837 211 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms