RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W AIM22P47051 409 aa2.52□□□□□ -2.01
CTK3YML112W IMD4P50094 524 aaKnown RBP2.52□□□□□ -2.01
CTK3YML112W RRN11Q04712 507 aa2.52□□□□□ -2.01
CTK3YML112W RKM5Q12367 367 aa2.52□□□□□ -2.01
CTK3YML112W MES1P00958 751 aaKnown RBP2.51□□□□□ -2.01
CTK3YML112W SEC53P07283 254 aaKnown RBP2.51□□□□□ -2.01
CTK3YML112W CHS1P08004 1131 aa2.51□□□□□ -2.01
CTK3YML112W HEM15P16622 393 aa2.51□□□□□ -2.01
CTK3YML112W BUB3P26449 341 aa2.51□□□□□ -2.01
CTK3YML112W YIM1P28625 365 aa2.51□□□□□ -2.01
CTK3YML112W FRE2P36033 711 aa2.51□□□□□ -2.01
CTK3YML112W TCD2P36101 447 aaKnown RBP2.51□□□□□ -2.01
CTK3YML112W FAU1P40099 211 aa2.51□□□□□ -2.01
CTK3YML112W CAF40P53829 373 aa2.51□□□□□ -2.01
CTK3YML112W ELP3Q02908 557 aaKnown RBP2.51□□□□□ -2.01
CTK3YML112W PBA1Q05778 276 aa2.51□□□□□ -2.01
CTK3YML112W KEL3Q08979 651 aaPredicted RBP2.51□□□□□ -2.01
CTK3YML112W ERV2Q12284 196 aa2.51□□□□□ -2.01
CTK3YML112W ENT1Q12518 454 aa2.51□□□□□ -2.01
CTK3YML112W HHF1P02309 103 aaKnown RBP2.5□□□□□ -2.01
CTK3YML112W NDI1P32340 513 aa2.5□□□□□ -2.01
CTK3YML112W MFT1P33441 392 aaKnown RBP2.5□□□□□ -2.01
CTK3YML112W CBP4P37267 147 aa2.5□□□□□ -2.01
CTK3YML112W NOP4P37838 685 aaKnown RBP2.5□□□□□ -2.01
CTK3YML112W MBB1P39534 108 aa2.5□□□□□ -2.01
CTK3YML112W YIL067CP40514 678 aa2.5□□□□□ -2.01
CTK3YML112W SGN1P40561 250 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
CTK3YML112W AVT4P50944 713 aa2.5□□□□□ -2.01
CTK3YML112W IOC4Q04213 475 aa2.5□□□□□ -2.01
CTK3YML112W VPS38Q05919 439 aa2.5□□□□□ -2.01
CTK3YML112W BSC6Q08280 497 aa2.5□□□□□ -2.01
CTK3YML112W RCN2Q12044 265 aa2.5□□□□□ -2.01
CTK3YML112W RLM1Q12224 676 aa2.5□□□□□ -2.01
CTK3YML112W YJR112W-AQ3E743 109 aa2.5□□□□□ -2.01
CTK3YML112W COR1P07256 457 aa2.49□□□□□ -2.01
CTK3YML112W HSC82P15108 705 aaKnown RBP2.49□□□□□ -2.01
CTK3YML112W CRM1P30822 1084 aaKnown RBP2.49□□□□□ -2.01
CTK3YML112W GLC7P32598 312 aaKnown RBP2.49□□□□□ -2.01
CTK3YML112W REG2P38232 338 aa2.49□□□□□ -2.01
CTK3YML112W GCD10P41814 478 aa2.49□□□□□ -2.01
CTK3YML112W YGR210CP42942 411 aa2.49□□□□□ -2.01
CTK3YML112W SDT1P53078 280 aa2.49□□□□□ -2.01
CTK3YML112W YGR066CP53242 292 aa2.49□□□□□ -2.01
CTK3YML112W ARK1P53974 638 aa2.49□□□□□ -2.01
CTK3YML112W FIN1Q03898 291 aa2.49□□□□□ -2.01
CTK3YML112W TMC1Q08422 150 aaPredicted RBP2.49□□□□□ -2.01
CTK3YML112W TMS1Q12116 473 aa2.49□□□□□ -2.01
CTK3YML112W GAL80P04387 435 aa2.48□□□□□ -2.01
CTK3YML112W PEP3P27801 918 aa2.48□□□□□ -2.01
CTK3YML112W HXT1P32465 570 aa2.48□□□□□ -2.01
CTK3YML112W NAT2P37293 288 aa2.48□□□□□ -2.01
CTK3YML112W PTH1P38876 190 aaKnown RBP2.48□□□□□ -2.01
CTK3YML112W POP1P41812 875 aa2.48□□□□□ -2.01
CTK3YML112W RRT5P43607 289 aa2.48□□□□□ -2.01
CTK3YML112W URB2P47108 1174 aa2.48□□□□□ -2.01
CTK3YML112W ART5P53244 586 aaKnown RBP2.48□□□□□ -2.01
CTK3YML112W ESA1Q08649 445 aa2.48□□□□□ -2.01
CTK3YML112W RRG7Q08774 242 aaPredicted RBP2.48□□□□□ -2.01
CTK3YML112W THP3Q12049 470 aaKnown RBP2.48□□□□□ -2.01
CTK3YML112W AVL9Q12500 764 aa2.48□□□□□ -2.01
CTK3YML112W RAV1P47104 1357 aa2.48□□□□□ -2.01
CTK3YML112W SUP35P05453 685 aaKnown RBP2.47□□□□□ -2.01
CTK3YML112W CPR4P25334 318 aa2.47□□□□□ -2.01
CTK3YML112W PRD1P25375 712 aa2.47□□□□□ -2.01
CTK3YML112W ATP11P32453 318 aa2.47□□□□□ -2.01
CTK3YML112W PAH1P32567 862 aa2.47□□□□□ -2.01
CTK3YML112W WBP1P33767 430 aaKnown RBP2.47□□□□□ -2.01
CTK3YML112W SWD3P38123 315 aa2.47□□□□□ -2.01
CTK3YML112W SRO77P38163 1010 aa2.47□□□□□ -2.01
CTK3YML112W MUM2P38236 366 aa2.47□□□□□ -2.01
CTK3YML112W MTC6P38849 526 aa2.47□□□□□ -2.01
CTK3YML112W ERP2P39704 215 aa2.47□□□□□ -2.01
CTK3YML112W NOP16P40007 231 aaKnown RBP2.47□□□□□ -2.01
CTK3YML112W RMD8P43620 662 aa2.47□□□□□ -2.01
CTK3YML112W OGG1P53397 376 aaPredicted RBP2.47□□□□□ -2.01
CTK3YML112W GOR1P53839 350 aa2.47□□□□□ -2.01
CTK3YML112W CTI6Q08923 506 aa2.47□□□□□ -2.01
CTK3YML112W SEM1O94742 89 aa2.46□□□□□ -2.02
CTK3YML112W CLN3P13365 580 aa2.46□□□□□ -2.02
CTK3YML112W YCR100CP25606 316 aa2.46□□□□□ -2.02
CTK3YML112W ARO2P28777 376 aaKnown RBP2.46□□□□□ -2.02
CTK3YML112W SDH3P33421 198 aa2.46□□□□□ -2.02
CTK3YML112W KEL1P38853 1164 aaKnown RBP2.46□□□□□ -2.02
CTK3YML112W ISC1P40015 477 aaKnown RBP2.46□□□□□ -2.02
CTK3YML112W TMA108P40462 946 aa2.46□□□□□ -2.02
CTK3YML112W SYG1P40528 902 aa2.46□□□□□ -2.02
CTK3YML112W MRX6P48564 524 aa2.46□□□□□ -2.02
CTK3YML112W POP6P53218 158 aa2.46□□□□□ -2.02
CTK3YML112W MFB1Q04922 465 aa2.46□□□□□ -2.02
CTK3YML112W MHR1Q06630 226 aa2.46□□□□□ -2.02
CTK3YML112W YLR108CQ12259 485 aa2.46□□□□□ -2.02
CTK3YML112W HRT3Q12347 344 aa2.46□□□□□ -2.02
CTK3YML112W ADH2P00331 348 aaKnown RBP2.45□□□□□ -2.02
CTK3YML112W LEU4P06208 619 aaKnown RBP2.45□□□□□ -2.02
CTK3YML112W CBS1P14066 229 aa2.45□□□□□ -2.02
CTK3YML112W ISY1P21374 235 aaPredicted RBP2.45□□□□□ -2.02
CTK3YML112W REE1P40893 198 aa2.45□□□□□ -2.02
CTK3YML112W YGL039WP53183 348 aaKnown RBP2.45□□□□□ -2.02
CTK3YML112W CAF130P53280 1122 aaPredicted RBP2.45□□□□□ -2.02
CTK3YML112W TOF1P53840 1238 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms