RNA–Protein interactions for RNA: YKL008C

LAC1, Transcript of Ceramide synthase component, yeast

Gene LAC1, Length 1,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAC1	YKL008C	JJJ1	P53863	590 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	RLI1	Q03195	608 aa	Known RBP	4.25	□□□□□ -1.73
LAC1	YKL008C	SLD5	Q03406	294 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	TAF11	Q04226	346 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	YMR317W	Q04893	1140 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	PHO92	Q06390	306 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	ATG29	Q12092	213 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	SEC39	Q12745	709 aa		4.25	□□□□□ -1.73
LAC1	YKL008C	MRS3	P10566	314 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	ROX1	P25042	368 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	FRE1	P32791	686 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	SIP2	P34164	415 aa	Known RBP	4.24	□□□□□ -1.73
LAC1	YKL008C	CMC1	P36064	111 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	KEL1	P38853	1164 aa	Known RBP	4.24	□□□□□ -1.73
LAC1	YKL008C	UTP9	P38882	575 aa	Known RBP	4.24	□□□□□ -1.73
LAC1	YKL008C	YGL260W	P53056	76 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	GRX6	Q12438	231 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	RAV1	P47104	1357 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	SCC2	Q04002	1493 aa		4.24	□□□□□ -1.73
LAC1	YKL008C	NTE1	Q04958	1679 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	YRF1-1	P0CX20	1796 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	YRF1-5	P0CX21	1796 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	YRF1-8	P0CX22	1796 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	MES1	P00958	751 aa	Known RBP	4.23	□□□□□ -1.73
LAC1	YKL008C	RPL31B	P0C2H9	113 aa	Known RBP	4.23	□□□□□ -1.73
LAC1	YKL008C	YUR1	P26725	428 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	JNM1	P36224	373 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	SYO1	Q07395	620 aa		4.23	□□□□□ -1.73
LAC1	YKL008C	CAR1	P00812	333 aa	Known RBP	4.22	□□□□□ -1.73
LAC1	YKL008C	YML002W	P0CF17	737 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	RED1	P14291	827 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	YCR007C	P25354	239 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	BUD14	P27637	709 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	ATS1	P31386	333 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	UTR4	P32626	227 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	PTR2	P32901	601 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	SMF1	P38925	575 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	HXT14	P42833	540 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	CRZ1	P53968	678 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	SYF1	Q04048	859 aa	Predicted RBP	4.22	□□□□□ -1.73
LAC1	YKL008C	YDL009C	Q12210	107 aa		4.22	□□□□□ -1.73
LAC1	YKL008C	TRM732	Q03496	1420 aa		4.21	□□□□□ -1.73
LAC1	YKL008C	PDR15	Q04182	1529 aa	Known RBP	4.21	□□□□□ -1.73
LAC1	YKL008C	AMD1	P15274	810 aa	Known RBP	4.21	□□□□□ -1.74
LAC1	YKL008C	NDC1	P32500	655 aa		4.21	□□□□□ -1.74
LAC1	YKL008C	FMP46	P36141	133 aa	Known RBP	4.21	□□□□□ -1.74
LAC1	YKL008C	GPI1	P53306	609 aa		4.21	□□□□□ -1.74
LAC1	YKL008C	YLR287C	Q05881	355 aa		4.21	□□□□□ -1.74
LAC1	YKL008C	BNA5	Q05979	453 aa		4.21	□□□□□ -1.74
LAC1	YKL008C	CFT2	Q12102	859 aa	Predicted RBP	4.21	□□□□□ -1.74
LAC1	YKL008C	RTN2	Q12443	393 aa		4.21	□□□□□ -1.74
LAC1	YKL008C	TY1B-BR	Q12193	1756 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	TY1B-GR3	Q12316	1755 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	TY1B-OR	Q92393	1755 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	NUP159	P40477	1460 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	ERG3	P32353	365 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	SEC66	P33754	206 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	POP1	P41812	875 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	SRB7	P47822	140 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	SLG1	P54867	378 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	RPM2	Q02773	1202 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	RBS1	Q05672	457 aa	Known RBP	4.2	□□□□□ -1.74
LAC1	YKL008C	MRPL51	Q06090	140 aa	Predicted RBP	4.2	□□□□□ -1.74
LAC1	YKL008C	RKM5	Q12367	367 aa		4.2	□□□□□ -1.74
LAC1	YKL008C	RPL15A	P05748	204 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	GLK1	P17709	500 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	YCR022C	P25620	114 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	PRO3	P32263	286 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	ATP11	P32453	318 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	RTT101	P47050	842 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	OCA1	P50946	238 aa	Predicted RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	YGL108C	P53139	140 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	TAP42	Q04372	366 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	RQC1	Q05468	723 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	HCR1	Q05775	265 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	LSP1	Q12230	341 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	PGA3	Q12746	312 aa	Known RBP	4.19	□□□□□ -1.74
LAC1	YKL008C	YOL159C-A	Q3E769	90 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	ESP1	Q03018	1630 aa		4.19	□□□□□ -1.74
LAC1	YKL008C	RPL3	P14126	387 aa	Known RBP	4.18	□□□□□ -1.74
LAC1	YKL008C	MTF1	P14908	341 aa	Known RBP	4.18	□□□□□ -1.74
LAC1	YKL008C	DHH1	P39517	506 aa	Known RBP	4.18	□□□□□ -1.74
LAC1	YKL008C	YMR147W	P40218	223 aa	Known RBP	4.18	□□□□□ -1.74
LAC1	YKL008C	SYG1	P40528	902 aa		4.18	□□□□□ -1.74
LAC1	YKL008C	IRC15	Q02733	499 aa		4.18	□□□□□ -1.74
LAC1	YKL008C	YMR230W-A	Q3E7B5	62 aa		4.18	□□□□□ -1.74
LAC1	YKL008C	BRR1	Q99177	341 aa	Predicted RBP	4.18	□□□□□ -1.74
LAC1	YKL008C	FUR1	P18562	216 aa	Known RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	EXO70	P19658	623 aa		4.17	□□□□□ -1.74
LAC1	YKL008C	SPB1	P25582	841 aa	Predicted RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	FUN19	P28003	413 aa	Predicted RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	RAD14	P28519	371 aa		4.17	□□□□□ -1.74
LAC1	YKL008C	AFG1	P32317	509 aa		4.17	□□□□□ -1.74
LAC1	YKL008C	SAS3	P34218	831 aa		4.17	□□□□□ -1.74
LAC1	YKL008C	MTC4	P38335	694 aa	Known RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	RPR2	P40571	144 aa		4.17	□□□□□ -1.74
LAC1	YKL008C	GPD2	P41911	440 aa	Known RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	YFR016C	P43597	1233 aa	Known RBP	4.17	□□□□□ -1.74
LAC1	YKL008C	KEL3	Q08979	651 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms