RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W CTF3Q12748 733 aa3.2□□□□□ -1.9
CAP1YKL007W GAL80P04387 435 aa3.19□□□□□ -1.9
CAP1YKL007W COR1P07256 457 aa3.19□□□□□ -1.9
CAP1YKL007W NOP1P15646 327 aaKnown RBP3.19□□□□□ -1.9
CAP1YKL007W CRM1P30822 1084 aaKnown RBP3.19□□□□□ -1.9
CAP1YKL007W WBP1P33767 430 aaKnown RBP3.19□□□□□ -1.9
CAP1YKL007W CBP4P37267 147 aa3.19□□□□□ -1.9
CAP1YKL007W ERP2P39704 215 aa3.19□□□□□ -1.9
CAP1YKL007W HEL2Q05580 639 aaKnown RBP3.19□□□□□ -1.9
CAP1YKL007W SEC39Q12745 709 aa3.19□□□□□ -1.9
CAP1YKL007W RAV1P47104 1357 aa3.18□□□□□ -1.9
CAP1YKL007W FOB1O13329 566 aa3.18□□□□□ -1.9
CAP1YKL007W ELO2P25358 347 aa3.18□□□□□ -1.9
CAP1YKL007W OCA4P25366 362 aa3.18□□□□□ -1.9
CAP1YKL007W IMP2'P32351 346 aa3.18□□□□□ -1.9
CAP1YKL007W MRE11P32829 692 aa3.18□□□□□ -1.9
CAP1YKL007W SPG5P42933 373 aa3.18□□□□□ -1.9
CAP1YKL007W OGG1P53397 376 aaPredicted RBP3.18□□□□□ -1.9
CAP1YKL007W CAF40P53829 373 aa3.18□□□□□ -1.9
CAP1YKL007W VPS75P53853 264 aa3.18□□□□□ -1.9
CAP1YKL007W RRN11Q04712 507 aa3.18□□□□□ -1.9
CAP1YKL007W KEL3Q08979 651 aaPredicted RBP3.18□□□□□ -1.9
CAP1YKL007W YCL021W-AQ96VH3 125 aa3.18□□□□□ -1.9
CAP1YKL007W REV1P12689 985 aa3.17□□□□□ -1.9
CAP1YKL007W FUN19P28003 413 aaPredicted RBP3.17□□□□□ -1.9
CAP1YKL007W SGN1P40561 250 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
CAP1YKL007W MET28P40573 187 aa3.17□□□□□ -1.9
CAP1YKL007W POP1P41812 875 aa3.17□□□□□ -1.9
CAP1YKL007W WSC2P53832 503 aa3.17□□□□□ -1.9
CAP1YKL007W YDL007C-AQ2V2Q0 85 aa3.17□□□□□ -1.9
CAP1YKL007W MES1P00958 751 aaKnown RBP3.16□□□□□ -1.9
CAP1YKL007W SUP35P05453 685 aaKnown RBP3.16□□□□□ -1.9
CAP1YKL007W RPL31BP0C2H9 113 aaKnown RBP3.16□□□□□ -1.9
CAP1YKL007W CPR1P14832 162 aaKnown RBP3.16□□□□□ -1.9
CAP1YKL007W BUB3P26449 341 aa3.16□□□□□ -1.9
CAP1YKL007W MRP4P32902 394 aa3.16□□□□□ -1.9
CAP1YKL007W PAD1P33751 242 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
CAP1YKL007W SWH1P35845 1188 aa3.16□□□□□ -1.9
CAP1YKL007W FAU1P40099 211 aa3.16□□□□□ -1.9
CAP1YKL007W SHE10P53075 577 aa3.16□□□□□ -1.9
CAP1YKL007W TWF1P53250 332 aa3.16□□□□□ -1.9
CAP1YKL007W CAF130P53280 1122 aaPredicted RBP3.16□□□□□ -1.9
CAP1YKL007W BTN2P53286 410 aa3.16□□□□□ -1.9
CAP1YKL007W RPT6Q01939 405 aaKnown RBP3.16□□□□□ -1.9
CAP1YKL007W LEU4P06208 619 aaKnown RBP3.15□□□□□ -1.91
CAP1YKL007W HIP1P06775 603 aa3.15□□□□□ -1.91
CAP1YKL007W SPT15P13393 240 aaKnown RBP3.15□□□□□ -1.91
CAP1YKL007W NDI1P32340 513 aa3.15□□□□□ -1.91
CAP1YKL007W GYP6P32806 458 aa3.15□□□□□ -1.91
CAP1YKL007W FRE2P36033 711 aa3.15□□□□□ -1.91
CAP1YKL007W CST26P38226 397 aa3.15□□□□□ -1.91
CAP1YKL007W YBR225WP38321 900 aa3.15□□□□□ -1.91
CAP1YKL007W YFL067WP43537 175 aa3.15□□□□□ -1.91
CAP1YKL007W PET130P47065 347 aa3.15□□□□□ -1.91
CAP1YKL007W SVL3Q03088 825 aaKnown RBP3.15□□□□□ -1.91
CAP1YKL007W PIR3Q03180 325 aa3.15□□□□□ -1.91
CAP1YKL007W YDR239CQ03780 787 aa3.15□□□□□ -1.91
CAP1YKL007W SOV1Q04748 898 aa3.15□□□□□ -1.91
CAP1YKL007W IMH1Q06704 911 aaKnown RBP3.15□□□□□ -1.91
CAP1YKL007W RRP12Q12754 1228 aaKnown RBP3.15□□□□□ -1.91
CAP1YKL007W HHF1P02309 103 aaKnown RBP3.14□□□□□ -1.91
CAP1YKL007W HEM15P16622 393 aa3.14□□□□□ -1.91
CAP1YKL007W RNA14P25298 677 aaKnown RBP3.14□□□□□ -1.91
CAP1YKL007W DEG1P31115 442 aaKnown RBP3.14□□□□□ -1.91
CAP1YKL007W ATP11P32453 318 aa3.14□□□□□ -1.91
CAP1YKL007W REC114P32841 428 aa3.14□□□□□ -1.91
CAP1YKL007W OCA1P50946 238 aaPredicted RBP3.14□□□□□ -1.91
CAP1YKL007W SLG1P54867 378 aa3.14□□□□□ -1.91
CAP1YKL007W PDS5Q04264 1277 aa3.14□□□□□ -1.91
CAP1YKL007W RPC11Q04307 110 aaPredicted RBP3.14□□□□□ -1.91
CAP1YKL007W YER078W-AQ3E7A2 54 aa3.14□□□□□ -1.91
CAP1YKL007W RHO2P06781 192 aa3.13□□□□□ -1.91
CAP1YKL007W YAR066WP0CX18 203 aa3.13□□□□□ -1.91
CAP1YKL007W YHR214WP0CX19 203 aa3.13□□□□□ -1.91
CAP1YKL007W YBL059WP34224 193 aa3.13□□□□□ -1.91
CAP1YKL007W CMC1P36064 111 aa3.13□□□□□ -1.91
CAP1YKL007W SRO77P38163 1010 aa3.13□□□□□ -1.91
CAP1YKL007W VID24P38263 362 aa3.13□□□□□ -1.91
CAP1YKL007W UTP9P38882 575 aaKnown RBP3.13□□□□□ -1.91
CAP1YKL007W DOT5P40553 215 aa3.13□□□□□ -1.91
CAP1YKL007W ARF3P40994 183 aaRIP-Chip data3.13□□□□□ -1.91not detected
CAP1YKL007W IBD2P53892 351 aa3.13□□□□□ -1.91
CAP1YKL007W PNG1Q02890 363 aa3.13□□□□□ -1.91
CAP1YKL007W MFB1Q04922 465 aa3.13□□□□□ -1.91
CAP1YKL007W YCR100CP25606 316 aa3.12□□□□□ -1.91
CAP1YKL007W RAD14P28519 371 aa3.12□□□□□ -1.91
CAP1YKL007W GLC7P32598 312 aaKnown RBP3.12□□□□□ -1.91
CAP1YKL007W SDH3P33421 198 aa3.12□□□□□ -1.91
CAP1YKL007W SEC66P33754 206 aa3.12□□□□□ -1.91
CAP1YKL007W SYG1P40528 902 aa3.12□□□□□ -1.91
CAP1YKL007W SSN8P47821 323 aa3.12□□□□□ -1.91
CAP1YKL007W ARE2P53629 642 aaKnown RBP3.12□□□□□ -1.91
CAP1YKL007W MDG1P53885 366 aa3.12□□□□□ -1.91
CAP1YKL007W NCS2P53923 493 aaPredicted RBP3.12□□□□□ -1.91
CAP1YKL007W ODC1Q03028 310 aa3.12□□□□□ -1.91
CAP1YKL007W PAL1Q05518 499 aaKnown RBP3.12□□□□□ -1.91
CAP1YKL007W YDL121CQ07541 149 aa3.12□□□□□ -1.91
CAP1YKL007W ESA1Q08649 445 aa3.12□□□□□ -1.91
CAP1YKL007W ATG29Q12092 213 aa3.12□□□□□ -1.91
CAP1YKL007W RKM5Q12367 367 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms