RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W HSL1P34244 1518 aa2.05□□□□□ -2.08
HIT1YJR055W BNI1P41832 1953 aa2.05□□□□□ -2.08
HIT1YJR055W BPT1P14772 1559 aa2.04□□□□□ -2.08
HIT1YJR055W MYO2P19524 1574 aaKnown RBP2.04□□□□□ -2.08
HIT1YJR055W GLC7P32598 312 aaKnown RBP2.04□□□□□ -2.08
HIT1YJR055W SHP1P34223 423 aa2.04□□□□□ -2.08
HIT1YJR055W HCS1P34243 683 aa2.04□□□□□ -2.08
HIT1YJR055W UBP11P36026 717 aa2.04□□□□□ -2.08
HIT1YJR055W BNA4P38169 460 aa2.04□□□□□ -2.08
HIT1YJR055W TCM62P38228 572 aaKnown RBP2.04□□□□□ -2.08
HIT1YJR055W PAN6P40459 309 aa2.04□□□□□ -2.08
HIT1YJR055W GOR1P53839 350 aa2.04□□□□□ -2.08
HIT1YJR055W IBD2P53892 351 aa2.04□□□□□ -2.08
HIT1YJR055W THP1Q08231 455 aa2.04□□□□□ -2.08
HIT1YJR055W PEP1P32319 1579 aa2.03□□□□□ -2.08
HIT1YJR055W SLC1P33333 303 aa2.03□□□□□ -2.08
HIT1YJR055W FRE2P36033 711 aa2.03□□□□□ -2.08
HIT1YJR055W AUR1P36107 401 aaPredicted RBP2.03□□□□□ -2.08
HIT1YJR055W SAP185P40856 1058 aa2.03□□□□□ -2.08
HIT1YJR055W WWM1P43582 211 aaKnown RBP2.03□□□□□ -2.08
HIT1YJR055W GTR1Q00582 310 aa2.03□□□□□ -2.08
HIT1YJR055W RAD30Q04049 632 aa2.03□□□□□ -2.08
HIT1YJR055W COQ9Q05779 260 aa2.03□□□□□ -2.08
HIT1YJR055W VIP1Q06685 1146 aaKnown RBP2.03□□□□□ -2.08
HIT1YJR055W FAB1P34756 2278 aa2.03□□□□□ -2.08
HIT1YJR055W HIR3P47171 1648 aa2.02□□□□□ -2.09
HIT1YJR055W SPT6P23615 1451 aaKnown RBP2.02□□□□□ -2.09
HIT1YJR055W MRP13P12686 339 aa2.02□□□□□ -2.09
HIT1YJR055W ART10P18634 518 aaKnown RBP2.02□□□□□ -2.09
HIT1YJR055W YIH1P25637 258 aa2.02□□□□□ -2.09
HIT1YJR055W BUB3P26449 341 aa2.02□□□□□ -2.09
HIT1YJR055W MFT1P33441 392 aaKnown RBP2.02□□□□□ -2.09
HIT1YJR055W MID2P36027 376 aa2.02□□□□□ -2.09
HIT1YJR055W ALK1P43633 760 aaKnown RBP2.02□□□□□ -2.09
HIT1YJR055W POP6P53218 158 aa2.02□□□□□ -2.09
HIT1YJR055W RSN1Q03516 953 aa2.02□□□□□ -2.09
HIT1YJR055W BUD22Q04347 519 aaKnown RBP2.02□□□□□ -2.09
HIT1YJR055W MES1P00958 751 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W DAL2P25335 343 aa2.01□□□□□ -2.09
HIT1YJR055W ELO2P25358 347 aa2.01□□□□□ -2.09
HIT1YJR055W CRM1P30822 1084 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W PTH2P34222 208 aa2.01□□□□□ -2.09
HIT1YJR055W RSM22P36056 628 aa2.01□□□□□ -2.09
HIT1YJR055W MIX23P38162 196 aa2.01□□□□□ -2.09
HIT1YJR055W PRM5P40476 318 aa2.01□□□□□ -2.09
HIT1YJR055W ARC1P46672 376 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W AIM22P47051 409 aa2.01□□□□□ -2.09
HIT1YJR055W RTS3P53289 263 aa2.01□□□□□ -2.09
HIT1YJR055W ZPR1P53303 486 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W HEF3P53978 1044 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W TOF2Q02208 771 aa2.01□□□□□ -2.09
HIT1YJR055W VMS1Q04311 632 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W YCF1P39109 1515 aaKnown RBP2.01□□□□□ -2.09
HIT1YJR055W SGS1P35187 1447 aa2□□□□□ -2.09
HIT1YJR055W HSP26P15992 214 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
HIT1YJR055W KAR3P17119 729 aa2□□□□□ -2.09
HIT1YJR055W STB6P36085 766 aa2□□□□□ -2.09
HIT1YJR055W OST1P41543 476 aaKnown RBP2□□□□□ -2.09
HIT1YJR055W OGG1P53397 376 aaPredicted RBP2□□□□□ -2.09
HIT1YJR055W BSC5P53755 489 aa2□□□□□ -2.09
HIT1YJR055W YML037CQ03703 340 aa2□□□□□ -2.09
HIT1YJR055W FMP40Q08968 688 aaPredicted RBP2□□□□□ -2.09
HIT1YJR055W SPE4Q12455 300 aa2□□□□□ -2.09
HIT1YJR055W RPA190P10964 1664 aaKnown RBP1.99□□□□□ -2.09
HIT1YJR055W DNF1P32660 1571 aa1.99□□□□□ -2.09
HIT1YJR055W CDC24P11433 854 aaPredicted RBP1.99□□□□□ -2.09
HIT1YJR055W PRE8P23639 250 aa1.99□□□□□ -2.09
HIT1YJR055W MSG5P38590 489 aa1.99□□□□□ -2.09
HIT1YJR055W KAP123P40069 1113 aaKnown RBP1.99□□□□□ -2.09
HIT1YJR055W YGR021WP53212 290 aa1.99□□□□□ -2.09
HIT1YJR055W PEX25Q02969 394 aa1.99□□□□□ -2.09
HIT1YJR055W IOC4Q04213 475 aa1.99□□□□□ -2.09
HIT1YJR055W FDH1Q08911 376 aa1.99□□□□□ -2.09
HIT1YJR055W YPL199CQ08954 240 aa1.99□□□□□ -2.09
HIT1YJR055W CDC25P04821 1589 aa1.98□□□□□ -2.09
HIT1YJR055W RPS8AP0CX39 200 aaKnown RBP1.98□□□□□ -2.09
HIT1YJR055W RPS8BP0CX40 200 aaKnown RBP1.98□□□□□ -2.09
HIT1YJR055W MRS6P32864 603 aaKnown RBP1.98□□□□□ -2.09
HIT1YJR055W AFG3P39925 761 aa1.98□□□□□ -2.09
HIT1YJR055W NCA3P46955 337 aa1.98□□□□□ -2.09
HIT1YJR055W CBK1P53894 756 aa1.98□□□□□ -2.09
HIT1YJR055W YSA1Q01976 231 aa1.98□□□□□ -2.09
HIT1YJR055W ODC1Q03028 310 aa1.98□□□□□ -2.09
HIT1YJR055W HER2Q03557 464 aa1.98□□□□□ -2.09
HIT1YJR055W LTE1P07866 1435 aa1.98□□□□□ -2.09
HIT1YJR055W SSK2P53599 1579 aa1.98□□□□□ -2.09
HIT1YJR055W ATG2P53855 1592 aa1.98□□□□□ -2.09
HIT1YJR055W PRP2P20095 876 aaPredicted RBP1.97□□□□□ -2.09
HIT1YJR055W YCR100CP25606 316 aa1.97□□□□□ -2.09
HIT1YJR055W ATP11P32453 318 aa1.97□□□□□ -2.09
HIT1YJR055W LCL3P53153 274 aa1.97□□□□□ -2.09
HIT1YJR055W IPI3P53877 555 aa1.97□□□□□ -2.09
HIT1YJR055W ESC1Q03661 1658 aaKnown RBP1.96□□□□□ -2.1
HIT1YJR055W FUM1P08417 488 aaKnown RBP1.96□□□□□ -2.1
HIT1YJR055W SAM1P10659 382 aaKnown RBP1.96□□□□□ -2.1
HIT1YJR055W SAM2P19358 384 aaKnown RBP1.96□□□□□ -2.1
HIT1YJR055W POL4P25615 582 aa1.96□□□□□ -2.1
HIT1YJR055W CCT6P39079 546 aa1.96□□□□□ -2.1
HIT1YJR055W ISC1P40015 477 aaKnown RBP1.96□□□□□ -2.1
HIT1YJR055W TPM2P40414 161 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms