RNA–Protein interactions for RNA: YGR033C

TIM21, Transcript of Nonessential component of the TIM23 complex, yeast

Gene TIM21, Length 720 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM21	YGR033C	CYB2	P00175	591 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	GAL4	P04386	881 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	RPL6B	P05739	176 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	PDE2	P06776	526 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	RAD52	P06778	471 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	RPL1A	P0CX43	217 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	RPL1B	P0CX44	217 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	BEM1	P29366	551 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	HIR2	P32480	875 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	SER3	P40054	469 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	HXT9	P40885	567 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	RPS0B	P46654	252 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	NMD5	P46970	1048 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	YPT11	P48559	417 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	RHO5	P53879	331 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	SLG1	P54867	378 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	SEC5	P89102	971 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	RPL6A	Q02326	176 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	POS5	Q06892	414 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	UAF30	Q08747	228 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	APL5	Q08951	932 aa	Known RBP	4.61	□□□□□ -1.67
TIM21	YGR033C	FRE7	Q12333	620 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	BNR1	P40450	1375 aa		4.61	□□□□□ -1.67
TIM21	YGR033C	YPR089W	O13585	888 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	VMA2	P16140	517 aa	Known RBP	4.6	□□□□□ -1.67
TIM21	YGR033C	ATP10	P18496	279 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	PHO84	P25297	587 aa	Known RBP	4.6	□□□□□ -1.67
TIM21	YGR033C	SNC1	P31109	117 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	MSN2	P33748	704 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	FAD1	P38913	306 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	YJR154W	P47181	346 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	ERG13	P54839	491 aa	Known RBP	4.6	□□□□□ -1.67
TIM21	YGR033C	YOR365C	Q08844	703 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	KEL3	Q08979	651 aa	Predicted RBP	4.6	□□□□□ -1.67
TIM21	YGR033C	SKS1	Q12505	502 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	MTR10	Q99189	972 aa		4.6	□□□□□ -1.67
TIM21	YGR033C	MES1	P00958	751 aa	Known RBP	4.59	□□□□□ -1.67
TIM21	YGR033C	DAD2	P36162	133 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	DUG2	P38149	878 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	PHO90	P39535	881 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	RPT4	P53549	437 aa	Known RBP	4.59	□□□□□ -1.67
TIM21	YGR033C	TOF1	P53840	1238 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	OCA2	P53949	197 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	RSC9	Q03124	581 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	PPM1	Q04081	328 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	CAC2	Q04199	468 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	YDR341C	Q05506	607 aa	Known RBP	4.59	□□□□□ -1.67
TIM21	YGR033C	HER1	Q12276	1246 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	YDR061W	Q12298	539 aa		4.59	□□□□□ -1.67
TIM21	YGR033C	TY1B-A	O13527	1196 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	BAR1	P12630	587 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	RHB1	P25378	209 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	RRP1	P35178	278 aa	Predicted RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	ZTA1	P38230	334 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	KEL1	P38853	1164 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	FLO5	P38894	1075 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	YMR124W	P39523	943 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	ATF1	P40353	525 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	COP1	P53622	1201 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	VTC3	Q02725	835 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	LGE1	Q02796	332 aa	Known RBP	4.58	□□□□□ -1.68
TIM21	YGR033C	YLR112W	Q12130	139 aa		4.58	□□□□□ -1.68
TIM21	YGR033C	RIP1	P08067	215 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	YAP1	P19880	650 aa	Known RBP	4.57	□□□□□ -1.68
TIM21	YGR033C	SGV1	P23293	657 aa	Known RBP	4.57	□□□□□ -1.68
TIM21	YGR033C	KRE2	P27809	442 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	FLO10	P36170	1169 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	GDT1	P38301	280 aa	Predicted RBP	4.57	□□□□□ -1.68
TIM21	YGR033C	VHS2	P40463	436 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	SYG1	P40528	902 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	EPL1	P43572	832 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	ECM27	P47144	725 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	ALT2	P52892	507 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	DRN1	P53255	507 aa	Known RBP	4.57	□□□□□ -1.68
TIM21	YGR033C	RHO4	Q00246	291 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	SMA1	Q02651	245 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	GLO2	Q05584	274 aa		4.57	□□□□□ -1.68
TIM21	YGR033C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TIM21	YGR033C	FUN19	P28003	413 aa	Predicted RBP	4.56	□□□□□ -1.68
TIM21	YGR033C	ATP11	P32453	318 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	PEX2	P32800	271 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	GYP6	P32806	458 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	PHD1	P36093	366 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	YER130C	P39959	443 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	YTA12	P40341	825 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	YIL024C	P40543	189 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	TFG2	P41896	400 aa	Predicted RBP	4.56	□□□□□ -1.68
TIM21	YGR033C	FET5	P43561	622 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	MLC1	P53141	149 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	NCS2	P53923	493 aa	Predicted RBP	4.56	□□□□□ -1.68
TIM21	YGR033C	KTR5	P53966	522 aa	Predicted RBP	4.56	□□□□□ -1.68
TIM21	YGR033C	ADA2	Q02336	434 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	NUP100	Q02629	959 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	IZH1	Q03419	316 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	EKI1	Q03764	534 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	IVY1	Q04934	453 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	DIC1	Q06143	298 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	CRC1	Q12289	327 aa		4.56	□□□□□ -1.68
TIM21	YGR033C	CAR1	P00812	333 aa	Known RBP	4.55	□□□□□ -1.68
TIM21	YGR033C	LEU4	P06208	619 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms