RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C CTF18P49956 741 aa4.78□□□□□ -1.64
SEC9YGR009C DIA3P52290 468 aa4.78□□□□□ -1.64
SEC9YGR009C MRM2P53123 320 aa4.78□□□□□ -1.64
SEC9YGR009C RRP46P53256 223 aaPredicted RBP4.78□□□□□ -1.64
SEC9YGR009C DAM1P53267 343 aa4.78□□□□□ -1.64
SEC9YGR009C BUD17P53727 317 aa4.78□□□□□ -1.64
SEC9YGR009C DBP6P53734 629 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C TMA20P89886 181 aaPredicted RBP4.78□□□□□ -1.64
SEC9YGR009C YSA1Q01976 231 aa4.78□□□□□ -1.64
SEC9YGR009C RPL6AQ02326 176 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C HAP5Q02516 242 aa4.78□□□□□ -1.64
SEC9YGR009C RSM24Q03976 319 aa4.78□□□□□ -1.64
SEC9YGR009C YAP7Q08182 245 aa4.78□□□□□ -1.64
SEC9YGR009C RAX1Q08760 435 aa4.78□□□□□ -1.64
SEC9YGR009C MCH5Q08777 521 aa4.78□□□□□ -1.64
SEC9YGR009C GET3Q12154 354 aaKnown RBP4.78□□□□□ -1.64
SEC9YGR009C NBL1Q3E7Y6 73 aa4.78□□□□□ -1.64
SEC9YGR009C MDS3P53094 1487 aa4.77□□□□□ -1.65
SEC9YGR009C NUC1P08466 329 aa4.77□□□□□ -1.65
SEC9YGR009C RPL19AP0CX82 189 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C RPL19BP0CX83 189 aaPredicted RBP4.77□□□□□ -1.65
SEC9YGR009C MAS1P10507 462 aa4.77□□□□□ -1.65
SEC9YGR009C REV1P12689 985 aa4.77□□□□□ -1.65
SEC9YGR009C GCN3P14741 305 aa4.77□□□□□ -1.65
SEC9YGR009C ADY2P25613 283 aa4.77□□□□□ -1.65
SEC9YGR009C YCR061WP25639 631 aa4.77□□□□□ -1.65
SEC9YGR009C PDC6P26263 563 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C RAD14P28519 371 aa4.77□□□□□ -1.65
SEC9YGR009C AFG1P32317 509 aa4.77□□□□□ -1.65
SEC9YGR009C AAR2P32357 355 aaPredicted RBP4.77□□□□□ -1.65
SEC9YGR009C ANR2P36090 516 aaPredicted RBP4.77□□□□□ -1.65
SEC9YGR009C SHM1P37292 490 aaPredicted RBP4.77□□□□□ -1.65
SEC9YGR009C SCO2P38072 301 aa4.77□□□□□ -1.65
SEC9YGR009C AGP2P38090 596 aa4.77□□□□□ -1.65
SEC9YGR009C GIP1P38229 639 aa4.77□□□□□ -1.65
SEC9YGR009C IMD2P38697 523 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C STB5P38699 743 aa4.77□□□□□ -1.65
SEC9YGR009C SPC97P38863 823 aa4.77□□□□□ -1.65
SEC9YGR009C FET3P38993 636 aa4.77□□□□□ -1.65
SEC9YGR009C AFG3P39925 761 aa4.77□□□□□ -1.65
SEC9YGR009C ECM10P39987 644 aa4.77□□□□□ -1.65
SEC9YGR009C RGI1P40043 161 aaPredicted RBP4.77□□□□□ -1.65
SEC9YGR009C GVP36P40531 326 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C YKE4P40544 346 aa4.77□□□□□ -1.65
SEC9YGR009C NAS6P50086 228 aa4.77□□□□□ -1.65
SEC9YGR009C ZRG17P53735 605 aa4.77□□□□□ -1.65
SEC9YGR009C YNL143CP53908 130 aa4.77□□□□□ -1.65
SEC9YGR009C UTP6Q02354 440 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C NOG1Q02892 647 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C ELP3Q02908 557 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C EBS1Q03466 884 aaKnown RBP4.77□□□□□ -1.65
SEC9YGR009C CDC123Q05791 360 aa4.77□□□□□ -1.65
SEC9YGR009C HDA2Q06629 674 aa4.77□□□□□ -1.65
SEC9YGR009C YDR306CQ06640 478 aa4.77□□□□□ -1.65
SEC9YGR009C UIP4Q08926 304 aa4.77□□□□□ -1.65
SEC9YGR009C SUL2Q12325 893 aa4.77□□□□□ -1.65
SEC9YGR009C EMP46Q12396 444 aa4.77□□□□□ -1.65
SEC9YGR009C SNF8Q12483 233 aa4.77□□□□□ -1.65
SEC9YGR009C MET5P47169 1442 aa4.77□□□□□ -1.65
SEC9YGR009C COQ4O13525 335 aa4.76□□□□□ -1.65
SEC9YGR009C TDH2P00358 332 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C TDH3P00359 332 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SEC9YGR009C CDC8P00572 216 aa4.76□□□□□ -1.65
SEC9YGR009C GCR1P07261 785 aa4.76□□□□□ -1.65
SEC9YGR009C LPD1P09624 499 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C CDC24P11433 854 aaPredicted RBP4.76□□□□□ -1.65
SEC9YGR009C AIM17P23180 465 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C SNT1P25357 1226 aa4.76□□□□□ -1.65
SEC9YGR009C PET18P25362 215 aa4.76□□□□□ -1.65
SEC9YGR009C CSM1P25651 190 aa4.76□□□□□ -1.65
SEC9YGR009C SUV3P32580 737 aa4.76□□□□□ -1.65
SEC9YGR009C NGR1P32831 672 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C DTR1P38125 572 aa4.76□□□□□ -1.65
SEC9YGR009C AIM3P38266 947 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C SMF1P38925 575 aa4.76□□□□□ -1.65
SEC9YGR009C CCT2P39076 527 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C GIP2P40036 548 aa4.76□□□□□ -1.65
SEC9YGR009C CDC40P40968 455 aaPredicted RBP4.76□□□□□ -1.65
SEC9YGR009C ALR2P43553 858 aa4.76□□□□□ -1.65
SEC9YGR009C IRC5P43610 853 aa4.76□□□□□ -1.65
SEC9YGR009C YGR126WP53274 230 aa4.76□□□□□ -1.65
SEC9YGR009C LSC2P53312 427 aa4.76□□□□□ -1.65
SEC9YGR009C RTT102P53330 157 aa4.76□□□□□ -1.65
SEC9YGR009C YAT1P80235 687 aa4.76□□□□□ -1.65
SEC9YGR009C MSC2Q03455 724 aa4.76□□□□□ -1.65
SEC9YGR009C GIS1Q03833 894 aa4.76□□□□□ -1.65
SEC9YGR009C SNO4Q04902 237 aa4.76□□□□□ -1.65
SEC9YGR009C SGT1Q08446 395 aa4.76□□□□□ -1.65
SEC9YGR009C HSP33Q08914 237 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C HSP32Q08992 237 aa4.76□□□□□ -1.65
SEC9YGR009C TMA46Q12000 345 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C YLR108CQ12259 485 aa4.76□□□□□ -1.65
SEC9YGR009C ATG31Q12421 196 aa4.76□□□□□ -1.65
SEC9YGR009C PTC5Q12511 572 aa4.76□□□□□ -1.65
SEC9YGR009C XRN1P22147 1528 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C PRC1P00729 532 aa4.76□□□□□ -1.65
SEC9YGR009C TRP4P07285 380 aaPredicted RBP4.76□□□□□ -1.65
SEC9YGR009C SWI5P08153 709 aa4.76□□□□□ -1.65
SEC9YGR009C ERG20P08524 352 aaKnown RBP4.76□□□□□ -1.65
SEC9YGR009C FRS2P15625 503 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms