RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	HKR1	P41809	1802 aa		2.06	□□□□□ -2.08
DOT6	YER088C	SUC2	P00724	532 aa		2.06	□□□□□ -2.08
DOT6	YER088C	PEP4	P07267	405 aa	Known RBP	2.06	□□□□□ -2.08
DOT6	YER088C	OSM1	P21375	501 aa	Known RBP	2.06	□□□□□ -2.08
DOT6	YER088C	RPL32	P38061	130 aa	Known RBP	2.06	□□□□□ -2.08
DOT6	YER088C	ROT2	P38138	954 aa		2.06	□□□□□ -2.08
DOT6	YER088C	MUM2	P38236	366 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YBR225W	P38321	900 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YHR210C	P38893	341 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YAT2	P40017	923 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YGR127W	P53275	312 aa		2.06	□□□□□ -2.08
DOT6	YER088C	SAM50	P53969	484 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YMR160W	Q03823	816 aa		2.06	□□□□□ -2.08
DOT6	YER088C	MSS11	Q03825	758 aa		2.06	□□□□□ -2.08
DOT6	YER088C	BUD22	Q04347	519 aa	Known RBP	2.06	□□□□□ -2.08
DOT6	YER088C	BNA5	Q05979	453 aa		2.06	□□□□□ -2.08
DOT6	YER088C	SSK1	Q07084	712 aa		2.06	□□□□□ -2.08
DOT6	YER088C	HUA2	Q12134	243 aa		2.06	□□□□□ -2.08
DOT6	YER088C	YLL067C	Q07888	1374 aa		2.06	□□□□□ -2.08
DOT6	YER088C	RAD52	P06778	471 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	SEC53	P07283	254 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	PEP5	P12868	1029 aa		2.05	□□□□□ -2.08
DOT6	YER088C	ART10	P18634	518 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	SMY1	P32364	656 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	WBP1	P33767	430 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	MIC60	P36112	540 aa		2.05	□□□□□ -2.08
DOT6	YER088C	DHH1	P39517	506 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	YEL057C	P39983	233 aa		2.05	□□□□□ -2.08
DOT6	YER088C	AXL1	P40851	1208 aa		2.05	□□□□□ -2.08
DOT6	YER088C	SAD1	P43589	448 aa		2.05	□□□□□ -2.08
DOT6	YER088C	AIM22	P47051	409 aa		2.05	□□□□□ -2.08
DOT6	YER088C	SMM1	P53720	384 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	TDA7	P53882	636 aa	Predicted RBP	2.05	□□□□□ -2.08
DOT6	YER088C	DAP1	Q12091	152 aa		2.05	□□□□□ -2.08
DOT6	YER088C	YJR112W-A	Q3E743	109 aa		2.05	□□□□□ -2.08
DOT6	YER088C	PMD1	P32634	1753 aa		2.05	□□□□□ -2.08
DOT6	YER088C	YPR117W	Q06116	2489 aa		2.05	□□□□□ -2.08
DOT6	YER088C	CBS1	P14066	229 aa		2.05	□□□□□ -2.08
DOT6	YER088C	HSC82	P15108	705 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	EST1	P17214	699 aa	Predicted RBP	2.05	□□□□□ -2.08
DOT6	YER088C	GFD2	P25370	566 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	PRD1	P25375	712 aa		2.05	□□□□□ -2.08
DOT6	YER088C	ATS1	P31386	333 aa		2.05	□□□□□ -2.08
DOT6	YER088C	ECM15	P35195	104 aa		2.05	□□□□□ -2.08
DOT6	YER088C	TCD2	P36101	447 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	CIN4	P39110	191 aa		2.05	□□□□□ -2.08
DOT6	YER088C	YTA12	P40341	825 aa		2.05	□□□□□ -2.08
DOT6	YER088C	MET28	P40573	187 aa		2.05	□□□□□ -2.08
DOT6	YER088C	DIM1	P41819	318 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	PTR3	P43606	678 aa		2.05	□□□□□ -2.08
DOT6	YER088C	SNG1	P46950	547 aa		2.05	□□□□□ -2.08
DOT6	YER088C	IMD4	P50094	524 aa	Known RBP	2.05	□□□□□ -2.08
DOT6	YER088C	TIM10	P87108	93 aa		2.05	□□□□□ -2.08
DOT6	YER088C	YTH1	Q06102	208 aa	Predicted RBP	2.05	□□□□□ -2.08
DOT6	YER088C	DIB1	Q06819	143 aa	Predicted RBP	2.05	□□□□□ -2.08
DOT6	YER088C	YEH2	Q07950	538 aa		2.05	□□□□□ -2.08
DOT6	YER088C	RCN2	Q12044	265 aa		2.05	□□□□□ -2.08
DOT6	YER088C	RLM1	Q12224	676 aa		2.05	□□□□□ -2.08
DOT6	YER088C	MED1	Q12321	566 aa		2.05	□□□□□ -2.08
DOT6	YER088C	GRX6	Q12438	231 aa		2.05	□□□□□ -2.08
DOT6	YER088C	YML133C	Q03099	1374 aa		2.04	□□□□□ -2.08
DOT6	YER088C	ICL1	P28240	557 aa	Predicted RBP	2.04	□□□□□ -2.08
DOT6	YER088C	SIP2	P34164	415 aa	Known RBP	2.04	□□□□□ -2.08
DOT6	YER088C	UBP11	P36026	717 aa		2.04	□□□□□ -2.08
DOT6	YER088C	FMP46	P36141	133 aa	Known RBP	2.04	□□□□□ -2.08
DOT6	YER088C	SRO77	P38163	1010 aa		2.04	□□□□□ -2.08
DOT6	YER088C	ICS2	P38284	255 aa		2.04	□□□□□ -2.08
DOT6	YER088C	CSM2	P40465	213 aa		2.04	□□□□□ -2.08
DOT6	YER088C	MDG1	P53885	366 aa		2.04	□□□□□ -2.08
DOT6	YER088C	SLG1	P54867	378 aa		2.04	□□□□□ -2.08
DOT6	YER088C	FIN1	Q03898	291 aa		2.04	□□□□□ -2.08
DOT6	YER088C	YDR415C	Q04033	374 aa	Predicted RBP	2.04	□□□□□ -2.08
DOT6	YER088C	HSH49	Q99181	213 aa	Predicted RBP	2.04	□□□□□ -2.08
DOT6	YER088C	LPD1	P09624	499 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	TRS65	P32893	560 aa		2.03	□□□□□ -2.08
DOT6	YER088C	VPS17	P32913	551 aa		2.03	□□□□□ -2.08
DOT6	YER088C	SEF1	P34228	1148 aa		2.03	□□□□□ -2.08
DOT6	YER088C	YKL023W	P36103	277 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	TCM62	P38228	572 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	OSH3	P38713	996 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	VPS52	P39904	641 aa		2.03	□□□□□ -2.08
DOT6	YER088C	TIF4631	P39935	952 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	YMR147W	P40218	223 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	RMD8	P43620	662 aa		2.03	□□□□□ -2.08
DOT6	YER088C	ALT2	P52892	507 aa		2.03	□□□□□ -2.08
DOT6	YER088C	VID30	P53076	958 aa		2.03	□□□□□ -2.08
DOT6	YER088C	YGR126W	P53274	230 aa		2.03	□□□□□ -2.08
DOT6	YER088C	IPI3	P53877	555 aa		2.03	□□□□□ -2.08
DOT6	YER088C	SHR3	Q02774	210 aa		2.03	□□□□□ -2.08
DOT6	YER088C	RTT103	Q05543	409 aa		2.03	□□□□□ -2.08
DOT6	YER088C	YDL057W	Q07379	328 aa		2.03	□□□□□ -2.08
DOT6	YER088C	RPL15A	P05748	204 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	PHO2	P07269	559 aa		2.03	□□□□□ -2.08
DOT6	YER088C	APE1	P14904	514 aa		2.03	□□□□□ -2.08
DOT6	YER088C	PRP2	P20095	876 aa	Predicted RBP	2.03	□□□□□ -2.08
DOT6	YER088C	YCR022C	P25620	114 aa		2.03	□□□□□ -2.08
DOT6	YER088C	MRE11	P32829	692 aa		2.03	□□□□□ -2.08
DOT6	YER088C	KEL1	P38853	1164 aa	Known RBP	2.03	□□□□□ -2.08
DOT6	YER088C	ALG5	P40350	334 aa		2.03	□□□□□ -2.08
DOT6	YER088C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.03	□□□□□ -2.08	RIP-Chip

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms