RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C SFB2P53953 876 aa6.07□□□□□ -1.44
CDC34YDR054C ADE12P80210 433 aaKnown RBP6.07□□□□□ -1.44
CDC34YDR054C TLG1Q03322 224 aa6.07□□□□□ -1.44
CDC34YDR054C CSN9Q03981 162 aa6.07□□□□□ -1.44
CDC34YDR054C SYT1Q06836 1226 aa6.07□□□□□ -1.44
CDC34YDR054C PDH1Q12428 516 aaKnown RBP6.07□□□□□ -1.44
CDC34YDR054C TAO3P40468 2376 aa6.06□□□□□ -1.44
CDC34YDR054C RPS17AP02407 136 aaKnown RBP6.06□□□□□ -1.44
CDC34YDR054C RPS17BP14127 136 aaKnown RBP6.06□□□□□ -1.44
CDC34YDR054C PRP16P15938 1071 aaPredicted RBP6.06□□□□□ -1.44
CDC34YDR054C KIN3P22209 435 aa6.06□□□□□ -1.44
CDC34YDR054C AMD2P22580 549 aa6.06□□□□□ -1.44
CDC34YDR054C YCR099CP25657 155 aa6.06□□□□□ -1.44
CDC34YDR054C MRPL9P31334 269 aa6.06□□□□□ -1.44
CDC34YDR054C RIM1P32445 135 aaKnown RBP6.06□□□□□ -1.44
CDC34YDR054C PHA2P32452 334 aa6.06□□□□□ -1.44
CDC34YDR054C IMP3P32899 183 aaPredicted RBP6.06□□□□□ -1.44
CDC34YDR054C PHO11P35842 467 aa6.06□□□□□ -1.44
CDC34YDR054C RIM2P38127 377 aa6.06□□□□□ -1.44
CDC34YDR054C YSW1P38280 609 aa6.06□□□□□ -1.44
CDC34YDR054C PHO12P38693 467 aa6.06□□□□□ -1.44
CDC34YDR054C YLF2P38746 405 aa6.06□□□□□ -1.44
CDC34YDR054C SSZ1P38788 538 aaKnown RBP6.06□□□□□ -1.44
CDC34YDR054C YHR131CP38835 850 aa6.06□□□□□ -1.44
CDC34YDR054C FAR3P46671 204 aa6.06□□□□□ -1.44
CDC34YDR054C AIM23P47015 356 aa6.06□□□□□ -1.44
CDC34YDR054C TAF6P53040 516 aa6.06□□□□□ -1.44
CDC34YDR054C YGR250CP53316 781 aaKnown RBP6.06□□□□□ -1.44
CDC34YDR054C TNA1P53322 534 aa6.06□□□□□ -1.44
CDC34YDR054C YTP1P53584 459 aa6.06□□□□□ -1.44
CDC34YDR054C EFM6P53970 246 aa6.06□□□□□ -1.44
CDC34YDR054C ARP4P80428 489 aa6.06□□□□□ -1.44
CDC34YDR054C YMR210WQ03649 449 aa6.06□□□□□ -1.44
CDC34YDR054C YLR177WQ06251 628 aa6.06□□□□□ -1.44
CDC34YDR054C CRN1Q06440 651 aa6.06□□□□□ -1.44
CDC34YDR054C MCP2Q06567 569 aa6.06□□□□□ -1.44
CDC34YDR054C HUA2Q12134 243 aa6.06□□□□□ -1.44
CDC34YDR054C PER33Q12144 273 aa6.06□□□□□ -1.44
CDC34YDR054C RTN2Q12443 393 aa6.06□□□□□ -1.44
CDC34YDR054C YPR089WO13585 888 aa6.05□□□□□ -1.44
CDC34YDR054C SEC63P14906 663 aa6.05□□□□□ -1.44
CDC34YDR054C PMA2P19657 947 aa6.05□□□□□ -1.44
CDC34YDR054C PRP4P20053 465 aaKnown RBP6.05□□□□□ -1.44
CDC34YDR054C MNE1P24720 663 aa6.05□□□□□ -1.44
CDC34YDR054C ASK1P35734 292 aa6.05□□□□□ -1.44
CDC34YDR054C NNK1P36003 928 aa6.05□□□□□ -1.44
CDC34YDR054C HEK2P38199 381 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
CDC34YDR054C YBR138CP38277 524 aa6.05□□□□□ -1.44
CDC34YDR054C HSM3P38348 480 aa6.05□□□□□ -1.44
CDC34YDR054C YHR182WP38870 785 aa6.05□□□□□ -1.44
CDC34YDR054C BEM4P39011 633 aa6.05□□□□□ -1.44
CDC34YDR054C YIR007WP40566 764 aa6.05□□□□□ -1.44
CDC34YDR054C MNT2P53059 558 aa6.05□□□□□ -1.44
CDC34YDR054C PRM1P53835 661 aa6.05□□□□□ -1.44
CDC34YDR054C YNL143CP53908 130 aa6.05□□□□□ -1.44
CDC34YDR054C YNL058CP53947 316 aa6.05□□□□□ -1.44
CDC34YDR054C ORC3P54790 616 aa6.05□□□□□ -1.44
CDC34YDR054C YDR131CQ03899 556 aa6.05□□□□□ -1.44
CDC34YDR054C YPR114WQ06107 315 aa6.05□□□□□ -1.44
CDC34YDR054C NUS1Q12063 375 aa6.05□□□□□ -1.44
CDC34YDR054C UPC2Q12151 913 aa6.05□□□□□ -1.44
CDC34YDR054C HAL9Q12180 1030 aa6.05□□□□□ -1.44
CDC34YDR054C UBX3Q12229 455 aa6.05□□□□□ -1.44
CDC34YDR054C NOT5Q12514 560 aaPredicted RBP6.05□□□□□ -1.44
CDC34YDR054C YPT6Q99260 215 aa6.05□□□□□ -1.44
CDC34YDR054C SEC53P07283 254 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C ARG1P22768 420 aa6.04□□□□□ -1.44
CDC34YDR054C CLB1P24868 471 aa6.04□□□□□ -1.44
CDC34YDR054C EMC1P25574 760 aa6.04□□□□□ -1.44
CDC34YDR054C PPZ1P26570 692 aa6.04□□□□□ -1.44
CDC34YDR054C RPC19P28000 142 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C NIP1P32497 812 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C CTF13P35203 478 aa6.04□□□□□ -1.44
CDC34YDR054C LDB7P38210 180 aa6.04□□□□□ -1.44
CDC34YDR054C TIM17P39515 158 aa6.04□□□□□ -1.44
CDC34YDR054C ACO2P39533 789 aa6.04□□□□□ -1.44
CDC34YDR054C GDI1P39958 451 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C YJR061WP40355 935 aa6.04□□□□□ -1.44
CDC34YDR054C SEC28P40509 296 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C YFL054CP43549 646 aa6.04□□□□□ -1.44
CDC34YDR054C SIP4P46954 829 aa6.04□□□□□ -1.44
CDC34YDR054C AIF1P52923 378 aa6.04□□□□□ -1.44
CDC34YDR054C DUO1P53168 247 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C NNF2P53253 936 aa6.04□□□□□ -1.44
CDC34YDR054C OGG1P53397 376 aaPredicted RBP6.04□□□□□ -1.44
CDC34YDR054C RCF2P53721 224 aa6.04□□□□□ -1.44
CDC34YDR054C IST1P53843 298 aaPredicted RBP6.04□□□□□ -1.44
CDC34YDR054C YML119WQ03208 357 aa6.04□□□□□ -1.44
CDC34YDR054C TVP15Q03860 143 aa6.04□□□□□ -1.44
CDC34YDR054C ENT4Q07872 247 aa6.04□□□□□ -1.44
CDC34YDR054C YPL225WQ08971 146 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C RTK1Q12100 620 aaPredicted RBP6.04□□□□□ -1.44
CDC34YDR054C MRH1Q12117 320 aaPredicted RBP6.04□□□□□ -1.44
CDC34YDR054C PAR32Q12515 295 aaKnown RBP6.04□□□□□ -1.44
CDC34YDR054C YPL247CQ12523 523 aa6.04□□□□□ -1.44
CDC34YDR054C RPS14AP06367 137 aaKnown RBP6.03□□□□□ -1.44
CDC34YDR054C GLK1P17709 500 aaKnown RBP6.03□□□□□ -1.44
CDC34YDR054C SNT1P25357 1226 aa6.03□□□□□ -1.44
CDC34YDR054C PTM1P32857 523 aa6.03□□□□□ -1.44
CDC34YDR054C LIP5P32875 414 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms