RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W CHD1P32657 1468 aa1.37□□□□□ -2.19
CDC36YDL165W HHF1P02309 103 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W TEF1P02994 458 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W MIS1P09440 975 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W SSC1P0CS90 654 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W MSS116P15424 664 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W SGF29P25554 259 aa1.37□□□□□ -2.19
CDC36YDL165W PAP1P29468 568 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W RAD16P31244 790 aa1.37□□□□□ -2.19
CDC36YDL165W CBF2P32504 956 aa1.37□□□□□ -2.19
CDC36YDL165W PTH2P34222 208 aa1.37□□□□□ -2.19
CDC36YDL165W CPR5P35176 225 aa1.37□□□□□ -2.19
CDC36YDL165W RSM22P36056 628 aa1.37□□□□□ -2.19
CDC36YDL165W UIP5P36137 443 aa1.37□□□□□ -2.19
CDC36YDL165W JNM1P36224 373 aa1.37□□□□□ -2.19
CDC36YDL165W GDT1P38301 280 aaPredicted RBP1.37□□□□□ -2.19
CDC36YDL165W OSH3P38713 996 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W RRF1P38771 230 aa1.37□□□□□ -2.19
CDC36YDL165W SPT8P38915 602 aa1.37□□□□□ -2.19
CDC36YDL165W YER034WP40022 185 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W YIL161WP40449 235 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W IMA1P53051 589 aa1.37□□□□□ -2.19
CDC36YDL165W MPS2P53159 387 aa1.37□□□□□ -2.19
CDC36YDL165W RTC4P53850 401 aa1.37□□□□□ -2.19
CDC36YDL165W IPI3P53877 555 aa1.37□□□□□ -2.19
CDC36YDL165W FYV6P53913 173 aa1.37□□□□□ -2.19
CDC36YDL165W MRPL13Q02204 264 aa1.37□□□□□ -2.19
CDC36YDL165W YMR102CQ03177 834 aa1.37□□□□□ -2.19
CDC36YDL165W ATG16Q03818 150 aa1.37□□□□□ -2.19
CDC36YDL165W UBX2Q04228 584 aa1.37□□□□□ -2.19
CDC36YDL165W VPS20Q04272 221 aa1.37□□□□□ -2.19
CDC36YDL165W VTI1Q04338 217 aa1.37□□□□□ -2.19
CDC36YDL165W SNO4Q04902 237 aa1.37□□□□□ -2.19
CDC36YDL165W PBA1Q05778 276 aa1.37□□□□□ -2.19
CDC36YDL165W MMR1Q06324 491 aa1.37□□□□□ -2.19
CDC36YDL165W MRPL35Q06678 367 aa1.37□□□□□ -2.19
CDC36YDL165W VIP1Q06685 1146 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W HSP33Q08914 237 aaKnown RBP1.37□□□□□ -2.19
CDC36YDL165W RKM1Q08961 583 aaPredicted RBP1.37□□□□□ -2.19
CDC36YDL165W HSP32Q08992 237 aa1.37□□□□□ -2.19
CDC36YDL165W ENT1Q12518 454 aa1.37□□□□□ -2.19
CDC36YDL165W SMC6Q12749 1114 aa1.37□□□□□ -2.19
CDC36YDL165W BI3Q9ZZW7 517 aa1.37□□□□□ -2.19
CDC36YDL165W SWI1P09547 1314 aa1.37□□□□□ -2.19
CDC36YDL165W FOB1O13329 566 aa1.36□□□□□ -2.19
CDC36YDL165W JIP3O13555 125 aa1.36□□□□□ -2.19
CDC36YDL165W RPS3P05750 240 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W SPO16P17122 198 aa1.36□□□□□ -2.19
CDC36YDL165W VPS1P21576 704 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W UBC1P21734 215 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W ERG8P24521 451 aa1.36□□□□□ -2.19
CDC36YDL165W PGS1P25578 521 aa1.36□□□□□ -2.19
CDC36YDL165W DAL80P26343 269 aa1.36□□□□□ -2.19
CDC36YDL165W CDC60P26637 1090 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W ARO2P28777 376 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W BMH1P29311 267 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W ITR1P30605 584 aa1.36□□□□□ -2.19
CDC36YDL165W NTG1P31378 399 aa1.36□□□□□ -2.19
CDC36YDL165W KAR9P32526 644 aa1.36□□□□□ -2.19
CDC36YDL165W MRS6P32864 603 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W PXA2P34230 853 aa1.36□□□□□ -2.19
CDC36YDL165W ATP3P38077 311 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W KTR3P38130 404 aaPredicted RBP1.36□□□□□ -2.19
CDC36YDL165W PSY4P38193 441 aa1.36□□□□□ -2.19
CDC36YDL165W RXT2P38255 430 aa1.36□□□□□ -2.19
CDC36YDL165W YSW1P38280 609 aa1.36□□□□□ -2.19
CDC36YDL165W YBR242WP38331 238 aa1.36□□□□□ -2.19
CDC36YDL165W FSH1P38777 243 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W SHO1P40073 367 aa1.36□□□□□ -2.19
CDC36YDL165W ALG8P40351 577 aa1.36□□□□□ -2.19
CDC36YDL165W RIC1P40395 1056 aa1.36□□□□□ -2.19
CDC36YDL165W SAP185P40856 1058 aa1.36□□□□□ -2.19
CDC36YDL165W VTC2P43585 828 aa1.36□□□□□ -2.19
CDC36YDL165W SNX4P47057 423 aa1.36□□□□□ -2.19
CDC36YDL165W SGM1P47166 707 aa1.36□□□□□ -2.19
CDC36YDL165W TRF5P48561 642 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W RAD17P48581 401 aa1.36□□□□□ -2.19
CDC36YDL165W ATP22P50273 684 aaPredicted RBP1.36□□□□□ -2.19
CDC36YDL165W LCL3P53153 274 aa1.36□□□□□ -2.19
CDC36YDL165W SHY1P53266 389 aa1.36□□□□□ -2.19
CDC36YDL165W HST1P53685 503 aa1.36□□□□□ -2.19
CDC36YDL165W GIM3P53900 129 aa1.36□□□□□ -2.19
CDC36YDL165W ZDS2P54786 942 aa1.36□□□□□ -2.19
CDC36YDL165W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
CDC36YDL165W RRN5Q02983 363 aa1.36□□□□□ -2.19
CDC36YDL165W YML131WQ03102 365 aa1.36□□□□□ -2.19
CDC36YDL165W RLI1Q03195 608 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W SPC19Q03954 165 aa1.36□□□□□ -2.19
CDC36YDL165W PLP1Q04004 230 aa1.36□□□□□ -2.19
CDC36YDL165W RRP17Q04031 235 aaPredicted RBP1.36□□□□□ -2.19
CDC36YDL165W KRE28Q04431 385 aa1.36□□□□□ -2.19
CDC36YDL165W SML1Q04964 104 aa1.36□□□□□ -2.19
CDC36YDL165W VID22Q05934 901 aa1.36□□□□□ -2.19
CDC36YDL165W TSR2Q06672 205 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W LOT6Q07923 191 aa1.36□□□□□ -2.19
CDC36YDL165W BRX1Q08235 291 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W DNL4Q08387 944 aaPredicted RBP1.36□□□□□ -2.19
CDC36YDL165W RTC5Q12108 567 aaKnown RBP1.36□□□□□ -2.19
CDC36YDL165W IES3Q12345 250 aa1.36□□□□□ -2.19
CDC36YDL165W RRP36Q12481 300 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 154.6 ms