RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W NCA3P46955 337 aa2.37□□□□□ -2.03
HMRA1YCR097W BRO1P48582 844 aa2.37□□□□□ -2.03
HMRA1YCR097W LYS4P49367 693 aaPredicted RBP2.37□□□□□ -2.03
HMRA1YCR097W MDG1P53885 366 aa2.37□□□□□ -2.03
HMRA1YCR097W YPL199CQ08954 240 aa2.37□□□□□ -2.03
HMRA1YCR097W MFT1P33441 392 aaKnown RBP2.36□□□□□ -2.03
HMRA1YCR097W YBR144CP34215 104 aa2.36□□□□□ -2.03
HMRA1YCR097W BNA4P38169 460 aa2.36□□□□□ -2.03
HMRA1YCR097W TCM62P38228 572 aaKnown RBP2.36□□□□□ -2.03
HMRA1YCR097W YJR085CP47131 105 aaKnown RBP2.36□□□□□ -2.03
HMRA1YCR097W OGG1P53397 376 aaPredicted RBP2.36□□□□□ -2.03
HMRA1YCR097W VHS1Q03785 461 aa2.36□□□□□ -2.03
HMRA1YCR097W RIX7Q07844 837 aaKnown RBP2.36□□□□□ -2.03
HMRA1YCR097W THP1Q08231 455 aa2.36□□□□□ -2.03
HMRA1YCR097W ATP4P05626 244 aa2.35□□□□□ -2.03
HMRA1YCR097W SPS22P25380 463 aa2.35□□□□□ -2.03
HMRA1YCR097W BUB3P26449 341 aa2.35□□□□□ -2.03
HMRA1YCR097W YPR091CQ06833 770 aa2.35□□□□□ -2.03
HMRA1YCR097W TCO89Q08921 799 aa2.35□□□□□ -2.03
HMRA1YCR097W RFM1Q12192 310 aa2.35□□□□□ -2.03
HMRA1YCR097W SSE2P32590 693 aaKnown RBP2.34□□□□□ -2.03
HMRA1YCR097W CHS6P40955 746 aa2.34□□□□□ -2.03
HMRA1YCR097W GAB1P41733 394 aa2.34□□□□□ -2.03
HMRA1YCR097W CUE5Q08412 411 aaKnown RBP2.34□□□□□ -2.03
HMRA1YCR097W YPQ1Q12010 308 aa2.34□□□□□ -2.03
HMRA1YCR097W MF(ALPHA)1P01149 165 aa2.33□□□□□ -2.04
HMRA1YCR097W ALK1P43633 760 aaKnown RBP2.33□□□□□ -2.04
HMRA1YCR097W BNA1P47096 177 aa2.33□□□□□ -2.04
HMRA1YCR097W ECM11Q04110 302 aa2.33□□□□□ -2.04
HMRA1YCR097W SNF1P06782 633 aaKnown RBP2.32□□□□□ -2.04
HMRA1YCR097W CWC25P53854 179 aaKnown RBP2.32□□□□□ -2.04
HMRA1YCR097W YKU80Q04437 629 aa2.32□□□□□ -2.04
HMRA1YCR097W MES1P00958 751 aaKnown RBP2.31□□□□□ -2.04
HMRA1YCR097W ARD1P07347 238 aaPredicted RBP2.31□□□□□ -2.04
HMRA1YCR097W NFT1P0CE68 1218 aa2.31□□□□□ -2.04
HMRA1YCR097W SAM1P10659 382 aaKnown RBP2.31□□□□□ -2.04
HMRA1YCR097W SAM2P19358 384 aaKnown RBP2.31□□□□□ -2.04
HMRA1YCR097W YCR100CP25606 316 aa2.31□□□□□ -2.04
HMRA1YCR097W YHR131CP38835 850 aa2.31□□□□□ -2.04
HMRA1YCR097W SEO1P39709 593 aa2.31□□□□□ -2.04
HMRA1YCR097W ZPR1P53303 486 aaKnown RBP2.31□□□□□ -2.04
HMRA1YCR097W MTM1P53320 366 aa2.31□□□□□ -2.04
HMRA1YCR097W ODC1Q03028 310 aa2.31□□□□□ -2.04
HMRA1YCR097W YPL272CQ08984 517 aa2.31□□□□□ -2.04
HMRA1YCR097W NBP2Q12163 236 aa2.31□□□□□ -2.04
HMRA1YCR097W PRM7Q12459 698 aa2.31□□□□□ -2.04
HMRA1YCR097W YOL087CQ99247 1116 aa2.31□□□□□ -2.04
HMRA1YCR097W YEF3P16521 1044 aaKnown RBP2.3□□□□□ -2.04
HMRA1YCR097W UBP11P36026 717 aa2.3□□□□□ -2.04
HMRA1YCR097W MAL33P38157 468 aa2.3□□□□□ -2.04
HMRA1YCR097W UTP18P40362 594 aaPredicted RBP2.3□□□□□ -2.04
HMRA1YCR097W VID22Q05934 901 aa2.3□□□□□ -2.04
HMRA1YCR097W LUC7Q07508 261 aaPredicted RBP2.3□□□□□ -2.04
HMRA1YCR097W IRC25Q07951 179 aa2.3□□□□□ -2.04
HMRA1YCR097W TOF2Q02208 771 aa2.29□□□□□ -2.04
HMRA1YCR097W ART10P18634 518 aaKnown RBP2.28□□□□□ -2.04
HMRA1YCR097W RIB5P38145 238 aa2.28□□□□□ -2.04
HMRA1YCR097W ISC1P40015 477 aaKnown RBP2.28□□□□□ -2.04
HMRA1YCR097W COQ9Q05779 260 aa2.28□□□□□ -2.04
HMRA1YCR097W NYV1Q12255 253 aa2.28□□□□□ -2.04
HMRA1YCR097W YBR225WP38321 900 aa2.27□□□□□ -2.05
HMRA1YCR097W HEF3P53978 1044 aaKnown RBP2.27□□□□□ -2.05
HMRA1YCR097W HXT11P54862 567 aa2.27□□□□□ -2.05
HMRA1YCR097W SNO4Q04902 237 aa2.27□□□□□ -2.05
HMRA1YCR097W HSP33Q08914 237 aaKnown RBP2.27□□□□□ -2.05
HMRA1YCR097W HSP32Q08992 237 aa2.27□□□□□ -2.05
HMRA1YCR097W AUR1P36107 401 aaPredicted RBP2.26□□□□□ -2.05
HMRA1YCR097W ARA1P38115 344 aa2.26□□□□□ -2.05
HMRA1YCR097W MRPS9P38120 278 aa2.26□□□□□ -2.05
HMRA1YCR097W BUD22Q04347 519 aaKnown RBP2.26□□□□□ -2.05
HMRA1YCR097W YAR066WP0CX18 203 aa2.25□□□□□ -2.05
HMRA1YCR097W YHR214WP0CX19 203 aa2.25□□□□□ -2.05
HMRA1YCR097W NPL6P32832 435 aa2.25□□□□□ -2.05
HMRA1YCR097W SSU1P41930 458 aa2.25□□□□□ -2.05
HMRA1YCR097W MRP51Q02950 344 aa2.25□□□□□ -2.05
HMRA1YCR097W RAD61Q99359 647 aa2.25□□□□□ -2.05
HMRA1YCR097W TRP1P00912 224 aa2.24□□□□□ -2.05
HMRA1YCR097W MRP13P12686 339 aa2.24□□□□□ -2.05
HMRA1YCR097W YER010CP40011 234 aa2.24□□□□□ -2.05
HMRA1YCR097W AIM22P47051 409 aa2.24□□□□□ -2.05
HMRA1YCR097W CBK1P53894 756 aa2.24□□□□□ -2.05
HMRA1YCR097W AIM32Q04689 311 aa2.24□□□□□ -2.05
HMRA1YCR097W SSP2Q08646 371 aa2.24□□□□□ -2.05
HMRA1YCR097W ELO2P25358 347 aa2.23□□□□□ -2.05
HMRA1YCR097W YIH1P25637 258 aa2.23□□□□□ -2.05
HMRA1YCR097W TIM17P39515 158 aa2.23□□□□□ -2.05
HMRA1YCR097W TRS85P46944 698 aa2.23□□□□□ -2.05
HMRA1YCR097W SIP4P46954 829 aa2.23□□□□□ -2.05
HMRA1YCR097W PNG1Q02890 363 aa2.23□□□□□ -2.05
HMRA1YCR097W MUM3Q08750 479 aa2.23□□□□□ -2.05
HMRA1YCR097W FMP40Q08968 688 aaPredicted RBP2.23□□□□□ -2.05
HMRA1YCR097W BRR1Q99177 341 aaPredicted RBP2.23□□□□□ -2.05
HMRA1YCR097W ATP11P32453 318 aa2.22□□□□□ -2.05
HMRA1YCR097W MST28P39552 234 aa2.22□□□□□ -2.05
HMRA1YCR097W AIM10P39965 576 aaKnown RBP2.22□□□□□ -2.05
HMRA1YCR097W HST1P53685 503 aa2.22□□□□□ -2.05
HMRA1YCR097W RAD30Q04049 632 aa2.22□□□□□ -2.05
HMRA1YCR097W PSK1P31374 1356 aa2.22□□□□□ -2.05
HMRA1YCR097W PRP2P20095 876 aaPredicted RBP2.21□□□□□ -2.06
HMRA1YCR097W POP5P28005 173 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms