RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	ARP1	P38696	384 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	CDC1	P40986	491 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RPA34	P47006	233 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	RMD9	P53140	646 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	YTP1	P53584	459 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	TLG1	Q03322	224 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	MRPL1	Q04599	285 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	NDJ1	Q12366	352 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RRD2	Q12461	358 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RAV1	P47104	1357 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	SEC3	P33332	1336 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	COX3	P00420	269 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RPL7A	P05737	244 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	ILV5	P06168	395 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	RHO2	P06781	192 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	PUT2	P07275	575 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	PUT4	P15380	627 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RDS1	P25611	832 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	KRE2	P27809	442 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	BEM1	P29366	551 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	MSG5	P38590	489 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	BDH2	P39713	417 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	ULP2	P40537	1034 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	BPL1	P48445	690 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	YIP5	P53108	310 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	YGR126W	P53274	230 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	HEF3	P53978	1044 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	ADE13	Q05911	482 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	YLR455W	Q06188	304 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	YDL057W	Q07379	328 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	THI3	Q07471	609 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	GSH2	Q08220	491 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	YOL073C	Q08232	322 aa		4.19	□□□□□ -1.74
RKM3	YBR030W	RKM1	Q08961	583 aa	Predicted RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	SGT2	Q12118	346 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	RPL7B	Q12213	244 aa	Known RBP	4.19	□□□□□ -1.74
RKM3	YBR030W	PMR1	P13586	950 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	SGV1	P23293	657 aa	Known RBP	4.18	□□□□□ -1.74
RKM3	YBR030W	RIM1	P32445	135 aa	Known RBP	4.18	□□□□□ -1.74
RKM3	YBR030W	TRM2	P33753	639 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	RRP1	P35178	278 aa	Predicted RBP	4.18	□□□□□ -1.74
RKM3	YBR030W	MIC60	P36112	540 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	PCA1	P38360	1216 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	YHR210C	P38893	341 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	GCD10	P41814	478 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	SHE10	P53075	577 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	PRM1	P53835	661 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	MDM30	Q05930	598 aa		4.18	□□□□□ -1.74
RKM3	YBR030W	YER145C-A	A0A023PYF4	145 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	CBP2	P03874	630 aa	Predicted RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	LEU4	P06208	619 aa	Known RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	GAL7	P08431	366 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	PMA2	P19657	947 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	CNA1	P23287	553 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	CLB2	P24869	491 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	SIN4	P32259	974 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	SAC1	P32368	623 aa	Known RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	VHC1	P38329	1120 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	CIN1	P40987	1014 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	NMD5	P46970	1048 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	ASN1	P49089	572 aa	Known RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	MPS2	P53159	387 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	DRN1	P53255	507 aa	Known RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	RRP46	P53256	223 aa	Predicted RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	EGD1	Q02642	157 aa	Known RBP	4.17	□□□□□ -1.74
RKM3	YBR030W	RRN5	Q02983	363 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	POS5	Q06892	414 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	THP1	Q08231	455 aa		4.17	□□□□□ -1.74
RKM3	YBR030W	GCD2	P12754	651 aa	Predicted RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	SEC63	P14906	663 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	ALG1	P16661	449 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	ATP10	P18496	279 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	MIA40	P36046	403 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	YHL017W	P38745	532 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	ERV46	P39727	415 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	SSO2	P39926	295 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	SEC27	P41811	889 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	LYS20	P48570	428 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	PYK2	P52489	506 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	RRB1	Q04225	511 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	YLR049C	Q12110	428 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	RAD61	Q99359	647 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	VPS63	O13549	108 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	GPA1	P08539	472 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	RHB1	P25378	209 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	PMI40	P29952	429 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	TCM62	P38228	572 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	RFC3	P38629	340 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	LIN1	P38852	340 aa	Predicted RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	MNN9	P39107	395 aa	Known RBP	4.16	□□□□□ -1.74
RKM3	YBR030W	EXO1	P39875	702 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	YER130C	P39959	443 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	AGX1	P43567	385 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	YFR018C	P43599	363 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	ROG1	P53118	685 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	YDR541C	Q03049	344 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	ECM18	Q04623	453 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	KAP95	Q06142	861 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms