RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C EFM6P53970 246 aa2.3□□□□□ -2.04
SPC72YAL047C RPM2Q02773 1202 aa2.3□□□□□ -2.04
SPC72YAL047C YKU80Q04437 629 aa2.3□□□□□ -2.04
SPC72YAL047C HCR1Q05775 265 aaKnown RBP2.3□□□□□ -2.04
SPC72YAL047C VIP1Q06685 1146 aaKnown RBP2.3□□□□□ -2.04
SPC72YAL047C CFT1Q06632 1357 aaKnown RBP2.3□□□□□ -2.04
SPC72YAL047C RPL20AP0CX23 172 aaKnown RBP2.29□□□□□ -2.04
SPC72YAL047C RPL20BP0CX24 172 aaPredicted RBP2.29□□□□□ -2.04
SPC72YAL047C PEP5P12868 1029 aa2.29□□□□□ -2.04
SPC72YAL047C APE1P14904 514 aa2.29□□□□□ -2.04
SPC72YAL047C YIH1P25637 258 aa2.29□□□□□ -2.04
SPC72YAL047C MTR2P34232 184 aaKnown RBP2.29□□□□□ -2.04
SPC72YAL047C RPL32P38061 130 aaKnown RBP2.29□□□□□ -2.04
SPC72YAL047C VPS52P39904 641 aa2.29□□□□□ -2.04
SPC72YAL047C NPR2P39923 615 aa2.29□□□□□ -2.04
SPC72YAL047C VTC2P43585 828 aa2.29□□□□□ -2.04
SPC72YAL047C SIP4P46954 829 aa2.29□□□□□ -2.04
SPC72YAL047C ALT2P52892 507 aa2.29□□□□□ -2.04
SPC72YAL047C YGR126WP53274 230 aa2.29□□□□□ -2.04
SPC72YAL047C YSA1Q01976 231 aa2.29□□□□□ -2.04
SPC72YAL047C YML037CQ03703 340 aa2.29□□□□□ -2.04
SPC72YAL047C YMR087WQ04299 284 aa2.29□□□□□ -2.04
SPC72YAL047C MFB1Q04922 465 aa2.29□□□□□ -2.04
SPC72YAL047C ERP1Q05359 219 aaKnown RBP2.29□□□□□ -2.04
SPC72YAL047C RTT109Q07794 436 aa2.29□□□□□ -2.04
SPC72YAL047C ARD1P07347 238 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C MCK1P21965 375 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C PUP3P25451 205 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C SPC110P32380 944 aa2.28□□□□□ -2.04
SPC72YAL047C UBP11P36026 717 aa2.28□□□□□ -2.04
SPC72YAL047C AUR1P36107 401 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C NUP133P36161 1157 aa2.28□□□□□ -2.04
SPC72YAL047C AVT5P38176 459 aa2.28□□□□□ -2.04
SPC72YAL047C YBR225WP38321 900 aa2.28□□□□□ -2.04
SPC72YAL047C MTC4P38335 694 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C OSH3P38713 996 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C RPR2P40571 144 aa2.28□□□□□ -2.04
SPC72YAL047C IRC6P43615 237 aa2.28□□□□□ -2.04
SPC72YAL047C LYS4P49367 693 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C DUO1P53168 247 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C ARE2P53629 642 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C MRPL19P53875 158 aa2.28□□□□□ -2.04
SPC72YAL047C TAF11Q04226 346 aa2.28□□□□□ -2.04
SPC72YAL047C YDL057WQ07379 328 aa2.28□□□□□ -2.04
SPC72YAL047C RPL19AP0CX82 189 aaKnown RBP2.28□□□□□ -2.04
SPC72YAL047C RPL19BP0CX83 189 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C ATS1P31386 333 aa2.28□□□□□ -2.04
SPC72YAL047C DSD1P53095 428 aa2.28□□□□□ -2.04
SPC72YAL047C NGL3Q03210 505 aa2.28□□□□□ -2.04
SPC72YAL047C SPC19Q03954 165 aa2.28□□□□□ -2.04
SPC72YAL047C SMA2Q04658 369 aa2.28□□□□□ -2.04
SPC72YAL047C FMP40Q08968 688 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C YLL056CQ12177 298 aa2.28□□□□□ -2.04
SPC72YAL047C HSH49Q99181 213 aaPredicted RBP2.28□□□□□ -2.04
SPC72YAL047C GCN2P15442 1659 aa2.28□□□□□ -2.04
SPC72YAL047C REV1P12689 985 aa2.27□□□□□ -2.05
SPC72YAL047C FUR1P18562 216 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C KGD1P20967 1014 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C OLE1P21147 510 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C SYN8P31377 255 aa2.27□□□□□ -2.05
SPC72YAL047C SSE2P32590 693 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C SAC6P32599 642 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C LOS1P33418 1100 aaPredicted RBP2.27□□□□□ -2.05
SPC72YAL047C YBR144CP34215 104 aa2.27□□□□□ -2.05
SPC72YAL047C CIN4P39110 191 aa2.27□□□□□ -2.05
SPC72YAL047C BUD32P53323 261 aa2.27□□□□□ -2.05
SPC72YAL047C LUC7Q07508 261 aaPredicted RBP2.27□□□□□ -2.05
SPC72YAL047C HUA2Q12134 243 aa2.27□□□□□ -2.05
SPC72YAL047C RRG1Q12167 365 aaPredicted RBP2.27□□□□□ -2.05
SPC72YAL047C SNU66Q12420 587 aaPredicted RBP2.27□□□□□ -2.05
SPC72YAL047C SPT7P35177 1332 aa2.27□□□□□ -2.05
SPC72YAL047C ROM2P51862 1356 aaKnown RBP2.27□□□□□ -2.05
SPC72YAL047C POL4P25615 582 aa2.26□□□□□ -2.05
SPC72YAL047C TUL1P36096 758 aa2.26□□□□□ -2.05
SPC72YAL047C SHO1P40073 367 aa2.26□□□□□ -2.05
SPC72YAL047C RMD8P43620 662 aa2.26□□□□□ -2.05
SPC72YAL047C SCD6P45978 349 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SPC72YAL047C MRX6P48564 524 aa2.26□□□□□ -2.05
SPC72YAL047C COS10P52924 374 aa2.26□□□□□ -2.05
SPC72YAL047C RSC1P53236 928 aa2.26□□□□□ -2.05
SPC72YAL047C RLI1Q03195 608 aaKnown RBP2.26□□□□□ -2.05
SPC72YAL047C SYF1Q04048 859 aaPredicted RBP2.26□□□□□ -2.05
SPC72YAL047C IVY1Q04934 453 aa2.26□□□□□ -2.05
SPC72YAL047C YLR287CQ05881 355 aa2.26□□□□□ -2.05
SPC72YAL047C TLG2Q08144 397 aa2.26□□□□□ -2.05
SPC72YAL047C YDL009CQ12210 107 aa2.26□□□□□ -2.05
SPC72YAL047C AYT1Q12226 474 aa2.26□□□□□ -2.05
SPC72YAL047C YBR126W-AQ8TGU7 68 aa2.26□□□□□ -2.05
SPC72YAL047C MET17P06106 444 aa2.26□□□□□ -2.05
SPC72YAL047C SEC53P07283 254 aaKnown RBP2.26□□□□□ -2.05
SPC72YAL047C YCK1P23291 538 aa2.26□□□□□ -2.05
SPC72YAL047C FRE1P32791 686 aa2.26□□□□□ -2.05
SPC72YAL047C PMU1P36069 295 aa2.26□□□□□ -2.05
SPC72YAL047C ALG8P40351 577 aa2.26□□□□□ -2.05
SPC72YAL047C LCL3P53153 274 aa2.26□□□□□ -2.05
SPC72YAL047C BOR1P53838 576 aa2.26□□□□□ -2.05
SPC72YAL047C VPS75P53853 264 aa2.26□□□□□ -2.05
SPC72YAL047C MRPL51Q06090 140 aaPredicted RBP2.26□□□□□ -2.05
SPC72YAL047C SCM3Q12334 223 aa2.26□□□□□ -2.05
SPC72YAL047C RSF2P46974 1380 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms