RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A PSK1P31374 1356 aa21.16■□□□□ 0.98
TRN1tP(UGG)A MLP1Q02455 1875 aaKnown RBP21.15■□□□□ 0.98
TRN1tP(UGG)A CHZ1P40019 153 aaPredicted RBP21.15■□□□□ 0.98
TRN1tP(UGG)A SCT1P32784 759 aa21.14■□□□□ 0.97
TRN1tP(UGG)A MHP1P43638 1398 aa21.11■□□□□ 0.97
TRN1tP(UGG)A PTP3P40048 928 aa21.1■□□□□ 0.97
TRN1tP(UGG)A RRP5Q05022 1729 aaKnown RBP21.05■□□□□ 0.96
TRN1tP(UGG)A YML133CQ03099 1374 aa21■□□□□ 0.95
TRN1tP(UGG)A YLL067CQ07888 1374 aa21■□□□□ 0.95
TRN1tP(UGG)A YLL066CQ99208 1374 aa21■□□□□ 0.95
TRN1tP(UGG)A ADE6P38972 1358 aaKnown RBP20.98■□□□□ 0.95
TRN1tP(UGG)A PDS5Q04264 1277 aa20.94■□□□□ 0.94
TRN1tP(UGG)A LEU2P04173 364 aaPredicted RBP20.92■□□□□ 0.94
TRN1tP(UGG)A FKH1P40466 484 aa20.92■□□□□ 0.94
TRN1tP(UGG)A RTG3P38165 486 aa20.9■□□□□ 0.94
TRN1tP(UGG)A MTR4P47047 1073 aaKnown RBP20.9■□□□□ 0.94
TRN1tP(UGG)A YAH1Q12184 172 aaKnown RBP20.9■□□□□ 0.94
TRN1tP(UGG)A APP1P53933 587 aa20.89■□□□□ 0.93
TRN1tP(UGG)A YRF1-2P40105 1681 aa20.89■□□□□ 0.93
TRN1tP(UGG)A REB1P21538 810 aa20.87■□□□□ 0.93
TRN1tP(UGG)A PRP45P28004 379 aaPredicted RBP20.86■□□□□ 0.93
TRN1tP(UGG)A CSE4P36012 229 aa20.84■□□□□ 0.93
TRN1tP(UGG)A YIL177CP40434 1758 aa20.82■□□□□ 0.92
TRN1tP(UGG)A YJL225CP40889 1758 aa20.82■□□□□ 0.92
TRN1tP(UGG)A RPS24AP0CX31 135 aaKnown RBP20.81■□□□□ 0.92
TRN1tP(UGG)A RPS24BP0CX32 135 aaKnown RBP20.81■□□□□ 0.92
TRN1tP(UGG)A ENT1Q12518 454 aa20.81■□□□□ 0.92
TRN1tP(UGG)A PRP43P53131 767 aaKnown RBP20.8■□□□□ 0.92
TRN1tP(UGG)A PRP5P21372 849 aaPredicted RBP20.79■□□□□ 0.92
TRN1tP(UGG)A PDI1P17967 522 aaKnown RBP20.72■□□□□ 0.91
TRN1tP(UGG)A ENV9Q08651 330 aa20.71■□□□□ 0.91
TRN1tP(UGG)A MSB3P48566 633 aaPredicted RBP20.7■□□□□ 0.9
TRN1tP(UGG)A SEC3P33332 1336 aaKnown RBP20.7■□□□□ 0.9
TRN1tP(UGG)A FKS3Q04952 1785 aa20.69■□□□□ 0.9
TRN1tP(UGG)A URB1P34241 1764 aaKnown RBP20.68■□□□□ 0.9
TRN1tP(UGG)A PSD2P53037 1138 aaKnown RBP20.68■□□□□ 0.9
TRN1tP(UGG)A RTF1P53064 558 aa20.68■□□□□ 0.9
TRN1tP(UGG)A NST1P53935 1240 aa20.68■□□□□ 0.9
TRN1tP(UGG)A SPT7P35177 1332 aa20.64■□□□□ 0.89
TRN1tP(UGG)A GAS4Q08271 471 aa20.63■□□□□ 0.89
TRN1tP(UGG)A AUS1Q08409 1394 aa20.62■□□□□ 0.89
TRN1tP(UGG)A DPS1P04802 557 aaKnown RBP20.62■□□□□ 0.89
TRN1tP(UGG)A TAP42Q04372 366 aa20.62■□□□□ 0.89
TRN1tP(UGG)A IMH1Q06704 911 aaKnown RBP20.61■□□□□ 0.89
TRN1tP(UGG)A SLM3Q12093 417 aa20.61■□□□□ 0.89
TRN1tP(UGG)A LEU3P08638 886 aa20.6■□□□□ 0.89
TRN1tP(UGG)A YIL055CP40523 627 aaKnown RBP20.6■□□□□ 0.89
TRN1tP(UGG)A APC1P53886 1748 aa20.58■□□□□ 0.89
TRN1tP(UGG)A TCB1Q12466 1186 aa20.58■□□□□ 0.89
TRN1tP(UGG)A YEF3P16521 1044 aaKnown RBP20.57■□□□□ 0.88
TRN1tP(UGG)A GRX4P32642 244 aa20.56■□□□□ 0.88
TRN1tP(UGG)A HIM1Q06674 414 aa20.56■□□□□ 0.88
TRN1tP(UGG)A KAR2P16474 682 aaKnown RBP20.55■□□□□ 0.88
TRN1tP(UGG)A RSF2P46974 1380 aa20.55■□□□□ 0.88
TRN1tP(UGG)A YRF1-3P0CX14 1859 aa20.52■□□□□ 0.88
TRN1tP(UGG)A YRF1-7P0CX15 1859 aa20.52■□□□□ 0.88
TRN1tP(UGG)A YRF1-6P53819 1859 aa20.52■□□□□ 0.88
TRN1tP(UGG)A TRK1P12685 1235 aa20.51■□□□□ 0.87
TRN1tP(UGG)A XKS1P42826 600 aa20.47■□□□□ 0.87
TRN1tP(UGG)A IES2P40154 320 aa20.46■□□□□ 0.87
TRN1tP(UGG)A SNF2P22082 1703 aa20.41■□□□□ 0.86
TRN1tP(UGG)A ENP1P38333 483 aaKnown RBP20.41■□□□□ 0.86
TRN1tP(UGG)A RPO41P13433 1351 aaKnown RBP20.41■□□□□ 0.86
TRN1tP(UGG)A GLN1P32288 370 aaKnown RBP20.39■□□□□ 0.85
TRN1tP(UGG)A PAP2P53632 584 aaKnown RBP20.39■□□□□ 0.85
TRN1tP(UGG)A ROM2P51862 1356 aaKnown RBP20.34■□□□□ 0.85
TRN1tP(UGG)A BUB1P41695 1021 aaKnown RBP RIP-Chip data20.33■□□□□ 0.85not detected
TRN1tP(UGG)A SIR4P11978 1358 aa20.33■□□□□ 0.84
TRN1tP(UGG)A YMR074CQ04773 145 aa20.32■□□□□ 0.84
TRN1tP(UGG)A RCR1P38212 213 aa20.3■□□□□ 0.84
TRN1tP(UGG)A YKL133CP36066 463 aa20.29■□□□□ 0.84
TRN1tP(UGG)A DOT5P40553 215 aa20.28■□□□□ 0.84
TRN1tP(UGG)A RRP46P53256 223 aaPredicted RBP20.26■□□□□ 0.83
TRN1tP(UGG)A FOX2Q02207 900 aaKnown RBP20.24■□□□□ 0.83
TRN1tP(UGG)A AKL1P38080 1108 aaKnown RBP20.21■□□□□ 0.83
TRN1tP(UGG)A DSD1P53095 428 aa20.21■□□□□ 0.83
TRN1tP(UGG)A MEC3Q02574 474 aa20.21■□□□□ 0.83
TRN1tP(UGG)A YRF1-4O13559 1382 aa20.21■□□□□ 0.83
TRN1tP(UGG)A RTR1P40084 226 aaPredicted RBP20.18■□□□□ 0.82
TRN1tP(UGG)A ADE16P54113 591 aaKnown RBP20.18■□□□□ 0.82
TRN1tP(UGG)A FRK1Q03002 865 aaPredicted RBP20.18■□□□□ 0.82
TRN1tP(UGG)A IOC4Q04213 475 aa20.18■□□□□ 0.82
TRN1tP(UGG)A RIM15P43565 1770 aa20.17■□□□□ 0.82
TRN1tP(UGG)A HSP104P31539 908 aaKnown RBP20.17■□□□□ 0.82
TRN1tP(UGG)A RPN11P43588 306 aaKnown RBP20.16■□□□□ 0.82
TRN1tP(UGG)A COBP00163 385 aa20.15■□□□□ 0.82
TRN1tP(UGG)A BUD31P25337 157 aaPredicted RBP20.13■□□□□ 0.81
TRN1tP(UGG)A INP54Q08227 384 aaKnown RBP20.12■□□□□ 0.81
TRN1tP(UGG)A MPP10P47083 593 aaKnown RBP20.09■□□□□ 0.81
TRN1tP(UGG)A YDL144CQ07589 356 aa20.09■□□□□ 0.81
TRN1tP(UGG)A LAM6Q08001 693 aa20.09■□□□□ 0.81
TRN1tP(UGG)A YKR075CP36155 307 aa20.08■□□□□ 0.81
TRN1tP(UGG)A CTF4Q01454 927 aa20.08■□□□□ 0.81
TRN1tP(UGG)A PRD1P25375 712 aa20.07■□□□□ 0.8
TRN1tP(UGG)A EDE1P34216 1381 aa20.07■□□□□ 0.8
TRN1tP(UGG)A UBP1P25037 809 aa20.06■□□□□ 0.8
TRN1tP(UGG)A YJL181WP46987 611 aa20.06■□□□□ 0.8
TRN1tP(UGG)A ATG13Q06628 738 aa20.06■□□□□ 0.8
TRN1tP(UGG)A NUP145P49687 1317 aa20.05■□□□□ 0.8
TRN1tP(UGG)A PRP40P33203 583 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms