RNA–Protein interactions for RNA: snR4

snR4, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeastyeast

Gene snR4, Length 186 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR4snR4 NUP188P52593 1655 aaKnown RBP9.9□□□□□ -0.82
snR4snR4 PCT1P13259 424 aa9.9□□□□□ -0.82
snR4snR4 ESL2P36168 1195 aa9.9□□□□□ -0.82
snR4snR4 YDL144CQ07589 356 aa9.9□□□□□ -0.82
snR4snR4 SUI2P20459 304 aaKnown RBP9.88□□□□□ -0.83
snR4snR4 SLN1P39928 1220 aaPredicted RBP9.88□□□□□ -0.83
snR4snR4 NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
snR4snR4 DNF3Q12674 1656 aa9.87□□□□□ -0.83
snR4snR4 BNR1P40450 1375 aa9.86□□□□□ -0.83
snR4snR4 TRM3Q07527 1436 aa9.85□□□□□ -0.83
snR4snR4 SIS2P36024 562 aa9.85□□□□□ -0.83
snR4snR4 LEO1P38439 464 aa9.84□□□□□ -0.83
snR4snR4 VPS24P36095 224 aaKnown RBP9.82□□□□□ -0.84
snR4snR4 DJP1P40564 432 aa9.81□□□□□ -0.84
snR4snR4 QCR6P00127 147 aa9.8□□□□□ -0.84
snR4snR4 NOT3P06102 836 aaKnown RBP9.8□□□□□ -0.84
snR4snR4 MSP1P28737 362 aa9.8□□□□□ -0.84
snR4snR4 RTG3P38165 486 aa9.8□□□□□ -0.84
snR4snR4 YRF1-4O13559 1382 aa9.79□□□□□ -0.84
snR4snR4 YML133CQ03099 1374 aa9.79□□□□□ -0.84
snR4snR4 YLL067CQ07888 1374 aa9.79□□□□□ -0.84
snR4snR4 YLL066CQ99208 1374 aa9.79□□□□□ -0.84
snR4snR4 YEF3P16521 1044 aaKnown RBP9.79□□□□□ -0.84
snR4snR4 SPE2P21182 396 aa9.79□□□□□ -0.84
snR4snR4 LSP1Q12230 341 aaKnown RBP9.79□□□□□ -0.84
snR4snR4 TRK1P12685 1235 aa9.78□□□□□ -0.84
snR4snR4 MPP10P47083 593 aaKnown RBP9.77□□□□□ -0.85
snR4snR4 RAD2P07276 1031 aa9.76□□□□□ -0.85
snR4snR4 FKH1P40466 484 aa9.76□□□□□ -0.85
snR4snR4 BUD27P43573 796 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
snR4snR4 KRE5P22023 1365 aa9.74□□□□□ -0.85
snR4snR4 SIR4P11978 1358 aa9.73□□□□□ -0.85
snR4snR4 MET5P47169 1442 aa9.73□□□□□ -0.85
snR4snR4 ARL1P38116 183 aaKnown RBP9.72□□□□□ -0.85
snR4snR4 YIL092WP40497 633 aa9.72□□□□□ -0.85
snR4snR4 CTR9P89105 1077 aa9.72□□□□□ -0.85
snR4snR4 BCK1Q01389 1478 aa9.72□□□□□ -0.85
snR4snR4 KNS1P32350 737 aaPredicted RBP9.71□□□□□ -0.86
snR4snR4 POL32P47110 350 aa9.7□□□□□ -0.86
snR4snR4 SAP155P43612 1002 aa9.69□□□□□ -0.86
snR4snR4 YAP3P38749 330 aa9.68□□□□□ -0.86
snR4snR4 TEA1P47988 759 aa9.68□□□□□ -0.86
snR4snR4 RRP46P53256 223 aaPredicted RBP9.68□□□□□ -0.86
snR4snR4 NOP58Q12499 511 aaKnown RBP9.68□□□□□ -0.86
snR4snR4 RTR1P40084 226 aaPredicted RBP9.66□□□□□ -0.86
snR4snR4 DAL5P15365 543 aa9.64□□□□□ -0.87
snR4snR4 HEF3P53978 1044 aaKnown RBP9.64□□□□□ -0.87
snR4snR4 CHZ1P40019 153 aaPredicted RBP9.63□□□□□ -0.87
snR4snR4 RLF2Q12495 606 aa9.63□□□□□ -0.87
snR4snR4 AIM44Q99299 758 aa9.63□□□□□ -0.87
snR4snR4 USO1P25386 1790 aa9.63□□□□□ -0.87
snR4snR4 YPP1P46951 817 aa9.62□□□□□ -0.87
snR4snR4 ITC1P53125 1264 aa9.62□□□□□ -0.87
snR4snR4 TPD3P31383 635 aa9.61□□□□□ -0.87
snR4snR4 PIL1P53252 339 aaKnown RBP9.61□□□□□ -0.87
snR4snR4 YGR130CP53278 816 aa9.61□□□□□ -0.87
snR4snR4 HAP5Q02516 242 aa9.61□□□□□ -0.87
snR4snR4 TAF8Q03750 510 aa9.61□□□□□ -0.87
snR4snR4 THI22Q06490 572 aa9.61□□□□□ -0.87
snR4snR4 SRS2P12954 1174 aa9.59□□□□□ -0.87
snR4snR4 PRD1P25375 712 aa9.59□□□□□ -0.87
snR4snR4 MAK21Q12176 1025 aaKnown RBP9.59□□□□□ -0.87
snR4snR4 ECM16Q04217 1267 aaKnown RBP9.58□□□□□ -0.88
snR4snR4 ROM2P51862 1356 aaKnown RBP9.58□□□□□ -0.88
snR4snR4 PUF6Q04373 656 aaKnown RBP9.57□□□□□ -0.88
snR4snR4 LCD1Q04377 747 aa9.57□□□□□ -0.88
snR4snR4 RAD9P14737 1309 aa9.56□□□□□ -0.88
snR4snR4 NAP1P25293 417 aaKnown RBP9.56□□□□□ -0.88
snR4snR4 COG8Q04632 607 aa9.56□□□□□ -0.88
snR4snR4 TY1B-NL2Q99337 1749 aaKnown RBP9.56□□□□□ -0.88
snR4snR4 ALD4P46367 519 aaKnown RBP9.55□□□□□ -0.88
snR4snR4 KAR2P16474 682 aaKnown RBP9.54□□□□□ -0.88
snR4snR4 RKM3P38222 552 aa9.53□□□□□ -0.88
snR4snR4 RPN1P38764 993 aaKnown RBP9.53□□□□□ -0.88
snR4snR4 APC1P53886 1748 aa9.53□□□□□ -0.88
snR4snR4 NUP145P49687 1317 aa9.53□□□□□ -0.88
snR4snR4 RRT14P40470 206 aa9.52□□□□□ -0.89
snR4snR4 RSC1P53236 928 aa9.52□□□□□ -0.89
snR4snR4 TAP42Q04372 366 aa9.52□□□□□ -0.89
snR4snR4 RTT109Q07794 436 aa9.52□□□□□ -0.89
snR4snR4 RAD50P12753 1312 aa9.51□□□□□ -0.89
snR4snR4 PSK1P31374 1356 aa9.5□□□□□ -0.89
snR4snR4 CSE4P36012 229 aa9.5□□□□□ -0.89
snR4snR4 BDH2P39713 417 aa9.5□□□□□ -0.89
snR4snR4 ESC2Q06340 456 aa9.49□□□□□ -0.89
snR4snR4 URN1Q06525 465 aaKnown RBP9.49□□□□□ -0.89
snR4snR4 DUR1,2P32528 1835 aaKnown RBP9.49□□□□□ -0.89
snR4snR4 AUS1Q08409 1394 aa9.49□□□□□ -0.89
snR4snR4 TPM2P40414 161 aa9.48□□□□□ -0.89
snR4snR4 TRP5P00931 707 aaKnown RBP9.47□□□□□ -0.89
snR4snR4 DLD1P32891 587 aa9.47□□□□□ -0.89
snR4snR4 CIR1P42940 261 aa9.47□□□□□ -0.89
snR4snR4 HST1P53685 503 aa9.47□□□□□ -0.89
snR4snR4 MCM2P29469 868 aa9.46□□□□□ -0.9
snR4snR4 KRE33P53914 1056 aaKnown RBP9.46□□□□□ -0.9
snR4snR4 GCR2Q01722 534 aa9.46□□□□□ -0.9
snR4snR4 NOP53Q12080 455 aaKnown RBP9.46□□□□□ -0.9
snR4snR4 LYS2P07702 1392 aa9.46□□□□□ -0.9
snR4snR4 RPN12P32496 274 aa9.45□□□□□ -0.9
snR4snR4 TCD1P38756 429 aa9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms