RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W NST1P53935 1240 aa12.33□□□□□ -0.44
BRR1YPR057W YMR196WQ04336 1088 aa12.33□□□□□ -0.44
BRR1YPR057W TY1B-NL2Q99337 1749 aaKnown RBP12.33□□□□□ -0.44
BRR1YPR057W PPH3P32345 308 aa12.32□□□□□ -0.44
BRR1YPR057W MIF2P35201 549 aa12.32□□□□□ -0.44
BRR1YPR057W YML133CQ03099 1374 aa12.3□□□□□ -0.44
BRR1YPR057W YLL067CQ07888 1374 aa12.3□□□□□ -0.44
BRR1YPR057W YLL066CQ99208 1374 aa12.3□□□□□ -0.44
BRR1YPR057W CPS1P27614 576 aa12.3□□□□□ -0.44
BRR1YPR057W THI12P42883 340 aa12.24□□□□□ -0.45
BRR1YPR057W THI5P43534 340 aa12.24□□□□□ -0.45
BRR1YPR057W THI11P47183 340 aa12.24□□□□□ -0.45
BRR1YPR057W THI13Q07748 340 aa12.24□□□□□ -0.45
BRR1YPR057W LEU2P04173 364 aaPredicted RBP12.23□□□□□ -0.45
BRR1YPR057W USO1P25386 1790 aa12.22□□□□□ -0.45
BRR1YPR057W YEF3P16521 1044 aaKnown RBP12.2□□□□□ -0.46
BRR1YPR057W PRS1P32895 427 aaKnown RBP12.2□□□□□ -0.46
BRR1YPR057W MTR4P47047 1073 aaKnown RBP12.2□□□□□ -0.46
BRR1YPR057W IOC4Q04213 475 aa12.18□□□□□ -0.46
BRR1YPR057W TRK1P12685 1235 aa12.17□□□□□ -0.46
BRR1YPR057W TAP42Q04372 366 aa12.17□□□□□ -0.46
BRR1YPR057W MLP1Q02455 1875 aaKnown RBP12.17□□□□□ -0.46
BRR1YPR057W ADE6P38972 1358 aaKnown RBP12.16□□□□□ -0.46
BRR1YPR057W PDI1P17967 522 aaKnown RBP12.15□□□□□ -0.46
BRR1YPR057W PRP43P53131 767 aaKnown RBP12.15□□□□□ -0.46
BRR1YPR057W RTF1P53064 558 aa12.12□□□□□ -0.47
BRR1YPR057W RPS24AP0CX31 135 aaKnown RBP12.1□□□□□ -0.47
BRR1YPR057W RPS24BP0CX32 135 aaKnown RBP12.1□□□□□ -0.47
BRR1YPR057W KAR2P16474 682 aaKnown RBP12.1□□□□□ -0.47
BRR1YPR057W GRX4P32642 244 aa12.1□□□□□ -0.47
BRR1YPR057W CSE4P36012 229 aa12.1□□□□□ -0.47
BRR1YPR057W RPP0P05317 312 aaKnown RBP12.09□□□□□ -0.47
BRR1YPR057W AUS1Q08409 1394 aa12.08□□□□□ -0.48
BRR1YPR057W HIM1Q06674 414 aa12.08□□□□□ -0.48
BRR1YPR057W RRP46P53256 223 aaPredicted RBP12.04□□□□□ -0.48
BRR1YPR057W YDL144CQ07589 356 aa12.04□□□□□ -0.48
BRR1YPR057W VPS27P40343 622 aaKnown RBP12.03□□□□□ -0.48
BRR1YPR057W CDC45Q08032 650 aa12.02□□□□□ -0.49
BRR1YPR057W GAS4Q08271 471 aa12.02□□□□□ -0.49
BRR1YPR057W PTP3P40048 928 aa12.01□□□□□ -0.49
BRR1YPR057W PAP2P53632 584 aaKnown RBP12.01□□□□□ -0.49
BRR1YPR057W DPS1P04802 557 aaKnown RBP12□□□□□ -0.49
BRR1YPR057W RTR1P40084 226 aaPredicted RBP11.99□□□□□ -0.49
BRR1YPR057W RPO41P13433 1351 aaKnown RBP11.98□□□□□ -0.49
BRR1YPR057W YFR006WP43590 535 aa11.98□□□□□ -0.49
BRR1YPR057W MPP10P47083 593 aaKnown RBP11.98□□□□□ -0.49
BRR1YPR057W PRP5P21372 849 aaPredicted RBP11.96□□□□□ -0.49
BRR1YPR057W PRP45P28004 379 aaPredicted RBP11.95□□□□□ -0.5
BRR1YPR057W NOP2P40991 618 aaKnown RBP11.95□□□□□ -0.5
BRR1YPR057W PRD1P25375 712 aa11.94□□□□□ -0.5
BRR1YPR057W RVB2Q12464 471 aaKnown RBP11.94□□□□□ -0.5
BRR1YPR057W SUI2P20459 304 aaKnown RBP11.93□□□□□ -0.5
BRR1YPR057W SNF2P22082 1703 aa11.93□□□□□ -0.5
BRR1YPR057W YRB30P53107 440 aaPredicted RBP11.92□□□□□ -0.5
BRR1YPR057W THI22Q06490 572 aa11.91□□□□□ -0.5
BRR1YPR057W SLM3Q12093 417 aa11.91□□□□□ -0.5
BRR1YPR057W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.9□□□□□ -0.5not detected
BRR1YPR057W TY4B-HP0C2J7 1802 aa11.89□□□□□ -0.51
BRR1YPR057W TY4B-JP47024 1803 aa11.89□□□□□ -0.51
BRR1YPR057W AKL1P38080 1108 aaKnown RBP11.89□□□□□ -0.51
BRR1YPR057W SAP155P43612 1002 aa11.89□□□□□ -0.51
BRR1YPR057W MSB3P48566 633 aaPredicted RBP11.89□□□□□ -0.51
BRR1YPR057W TPD3P31383 635 aa11.86□□□□□ -0.51
BRR1YPR057W DSD1P53095 428 aa11.86□□□□□ -0.51
BRR1YPR057W YRF1-4O13559 1382 aa11.86□□□□□ -0.51
BRR1YPR057W YRF1-2P40105 1681 aa11.86□□□□□ -0.51
BRR1YPR057W HEF3P53978 1044 aaKnown RBP11.85□□□□□ -0.51
BRR1YPR057W TCB1Q12466 1186 aa11.85□□□□□ -0.51
BRR1YPR057W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.84□□□□□ -0.51not detected
BRR1YPR057W RTT109Q07794 436 aa11.84□□□□□ -0.51
BRR1YPR057W FUN12P39730 1002 aaKnown RBP11.83□□□□□ -0.52
BRR1YPR057W REB1P21538 810 aa11.82□□□□□ -0.52
BRR1YPR057W RRP5Q05022 1729 aaKnown RBP11.82□□□□□ -0.52
BRR1YPR057W NTH2P35172 780 aa11.81□□□□□ -0.52
BRR1YPR057W XKS1P42826 600 aa11.81□□□□□ -0.52
BRR1YPR057W ENT1Q12518 454 aa11.81□□□□□ -0.52
BRR1YPR057W YNL050CP53952 270 aa11.8□□□□□ -0.52
BRR1YPR057W APC1P53886 1748 aa11.8□□□□□ -0.52
BRR1YPR057W HSP104P31539 908 aaKnown RBP11.79□□□□□ -0.52
BRR1YPR057W CTF4Q01454 927 aa11.79□□□□□ -0.52
BRR1YPR057W YAH1Q12184 172 aaKnown RBP11.79□□□□□ -0.52
BRR1YPR057W SIR4P11978 1358 aa11.79□□□□□ -0.52
BRR1YPR057W RSF2P46974 1380 aa11.79□□□□□ -0.52
BRR1YPR057W YIL177CP40434 1758 aa11.77□□□□□ -0.52
BRR1YPR057W YJL225CP40889 1758 aa11.77□□□□□ -0.52
BRR1YPR057W RCR1P38212 213 aa11.77□□□□□ -0.53
BRR1YPR057W AOS1Q06624 347 aa11.76□□□□□ -0.53
BRR1YPR057W ENV9Q08651 330 aa11.76□□□□□ -0.53
BRR1YPR057W APP1P53933 587 aa11.75□□□□□ -0.53
BRR1YPR057W RAD2P07276 1031 aa11.74□□□□□ -0.53
BRR1YPR057W MAM1P40065 302 aa11.74□□□□□ -0.53
BRR1YPR057W GYP7P48365 746 aa11.74□□□□□ -0.53
BRR1YPR057W ZDS1P50111 915 aaKnown RBP11.74□□□□□ -0.53
BRR1YPR057W IES2P40154 320 aa11.72□□□□□ -0.53
BRR1YPR057W RRT14P40470 206 aa11.72□□□□□ -0.53
BRR1YPR057W YIL092WP40497 633 aa11.72□□□□□ -0.53
BRR1YPR057W MAK21Q12176 1025 aaKnown RBP11.72□□□□□ -0.53
BRR1YPR057W BUD27P43573 796 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
BRR1YPR057W URB1P34241 1764 aaKnown RBP11.71□□□□□ -0.54
BRR1YPR057W FKS3Q04952 1785 aa11.7□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms