RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W CPS1P27614 576 aa14.53□□□□□ -0.08
MSF1YPR047W TAF8Q03750 510 aa14.53□□□□□ -0.08
MSF1YPR047W PRP45P28004 379 aaPredicted RBP14.51□□□□□ -0.09
MSF1YPR047W ESL2P36168 1195 aa14.51□□□□□ -0.09
MSF1YPR047W TAF5P38129 798 aa14.5□□□□□ -0.09
MSF1YPR047W RCM1P53972 490 aa14.49□□□□□ -0.09
MSF1YPR047W TY4B-HP0C2J7 1802 aa14.45□□□□□ -0.1
MSF1YPR047W TY4B-JP47024 1803 aa14.45□□□□□ -0.1
MSF1YPR047W BUD31P25337 157 aaPredicted RBP14.43□□□□□ -0.1
MSF1YPR047W PPH3P32345 308 aa14.42□□□□□ -0.1
MSF1YPR047W PRP5P21372 849 aaPredicted RBP14.4□□□□□ -0.1
MSF1YPR047W ADE6P38972 1358 aaKnown RBP14.35□□□□□ -0.11
MSF1YPR047W LEU3P08638 886 aa14.34□□□□□ -0.11
MSF1YPR047W PSK1P31374 1356 aa14.33□□□□□ -0.12
MSF1YPR047W MSB3P48566 633 aaPredicted RBP14.32□□□□□ -0.12
MSF1YPR047W URB1P34241 1764 aaKnown RBP14.31□□□□□ -0.12
MSF1YPR047W SPE2P21182 396 aa14.3□□□□□ -0.12
MSF1YPR047W UBP1P25037 809 aa14.3□□□□□ -0.12
MSF1YPR047W IES2P40154 320 aa14.26□□□□□ -0.13
MSF1YPR047W KIP3P53086 805 aaKnown RBP14.26□□□□□ -0.13
MSF1YPR047W RPN11P43588 306 aaKnown RBP14.25□□□□□ -0.13
MSF1YPR047W DOT5P40553 215 aa14.24□□□□□ -0.13
MSF1YPR047W TCB1Q12466 1186 aa14.24□□□□□ -0.13
MSF1YPR047W RSF2P46974 1380 aa14.22□□□□□ -0.13
MSF1YPR047W FKS3Q04952 1785 aa14.22□□□□□ -0.13
MSF1YPR047W ROM2P51862 1356 aaKnown RBP14.21□□□□□ -0.13
MSF1YPR047W EDE1P34216 1381 aa14.2□□□□□ -0.14
MSF1YPR047W SLM3Q12093 417 aa14.19□□□□□ -0.14
MSF1YPR047W LEU2P04173 364 aaPredicted RBP14.18□□□□□ -0.14
MSF1YPR047W PRP43P53131 767 aaKnown RBP14.18□□□□□ -0.14
MSF1YPR047W CSE4P36012 229 aa14.17□□□□□ -0.14
MSF1YPR047W MTR4P47047 1073 aaKnown RBP14.17□□□□□ -0.14
MSF1YPR047W FOX2Q02207 900 aaKnown RBP14.17□□□□□ -0.14
MSF1YPR047W YBL086CP38177 466 aa14.16□□□□□ -0.14
MSF1YPR047W CHZ1P40019 153 aaPredicted RBP14.15□□□□□ -0.14
MSF1YPR047W YRF1-3P0CX14 1859 aa14.14□□□□□ -0.15
MSF1YPR047W YRF1-7P0CX15 1859 aa14.14□□□□□ -0.15
MSF1YPR047W YRF1-6P53819 1859 aa14.14□□□□□ -0.15
MSF1YPR047W RPS24AP0CX31 135 aaKnown RBP14.14□□□□□ -0.15
MSF1YPR047W RPS24BP0CX32 135 aaKnown RBP14.14□□□□□ -0.15
MSF1YPR047W YJL181WP46987 611 aa14.13□□□□□ -0.15
MSF1YPR047W YLR419WQ06698 1435 aaKnown RBP14.12□□□□□ -0.15
MSF1YPR047W YEF3P16521 1044 aaKnown RBP14.12□□□□□ -0.15
MSF1YPR047W NPR2P39923 615 aa14.12□□□□□ -0.15
MSF1YPR047W GTT3P39996 337 aa14.11□□□□□ -0.15
MSF1YPR047W UGA2P38067 497 aa14.1□□□□□ -0.15
MSF1YPR047W ENP1P38333 483 aaKnown RBP14.09□□□□□ -0.15
MSF1YPR047W LYS4P49367 693 aaPredicted RBP14.09□□□□□ -0.15
MSF1YPR047W YIL177CP40434 1758 aa14.09□□□□□ -0.15
MSF1YPR047W YJL225CP40889 1758 aa14.09□□□□□ -0.15
MSF1YPR047W LAM6Q08001 693 aa14.08□□□□□ -0.15
MSF1YPR047W YKL133CP36066 463 aa14.07□□□□□ -0.16
MSF1YPR047W ORC1P54784 914 aaPredicted RBP14.07□□□□□ -0.16
MSF1YPR047W PRP40P33203 583 aaKnown RBP14.07□□□□□ -0.16
MSF1YPR047W XKS1P42826 600 aa14.07□□□□□ -0.16
MSF1YPR047W ALD2P47771 506 aa14.06□□□□□ -0.16
MSF1YPR047W APC1P53886 1748 aa14.05□□□□□ -0.16
MSF1YPR047W YML133CQ03099 1374 aa14.03□□□□□ -0.16
MSF1YPR047W YLL067CQ07888 1374 aa14.03□□□□□ -0.16
MSF1YPR047W YLL066CQ99208 1374 aa14.03□□□□□ -0.16
MSF1YPR047W COBP00163 385 aa14.03□□□□□ -0.16
MSF1YPR047W SSA2P10592 639 aaKnown RBP14.03□□□□□ -0.16
MSF1YPR047W SCT1P32784 759 aa14.03□□□□□ -0.16
MSF1YPR047W YKR075CP36155 307 aa14□□□□□ -0.17
MSF1YPR047W YRF1-4O13559 1382 aa13.99□□□□□ -0.17
MSF1YPR047W CTH1P47976 325 aa13.98□□□□□ -0.17
MSF1YPR047W DPS1P04802 557 aaKnown RBP13.93□□□□□ -0.18
MSF1YPR047W SSA1P10591 642 aaKnown RBP13.92□□□□□ -0.18
MSF1YPR047W GAS4Q08271 471 aa13.92□□□□□ -0.18
MSF1YPR047W SNF2P22082 1703 aa13.92□□□□□ -0.18
MSF1YPR047W MEC3Q02574 474 aa13.9□□□□□ -0.18
MSF1YPR047W FKH1P40466 484 aa13.9□□□□□ -0.19
MSF1YPR047W RTF1P53064 558 aa13.9□□□□□ -0.19
MSF1YPR047W FRK1Q03002 865 aaPredicted RBP13.9□□□□□ -0.19
MSF1YPR047W SIR4P11978 1358 aa13.89□□□□□ -0.19
MSF1YPR047W PDI1P17967 522 aaKnown RBP13.89□□□□□ -0.19
MSF1YPR047W MLP1Q02455 1875 aaKnown RBP13.88□□□□□ -0.19
MSF1YPR047W RCR1P38212 213 aa13.88□□□□□ -0.19
MSF1YPR047W SPT7P35177 1332 aa13.85□□□□□ -0.19
MSF1YPR047W ADE16P54113 591 aaKnown RBP13.85□□□□□ -0.19
MSF1YPR047W BDF1P35817 686 aa13.83□□□□□ -0.2
MSF1YPR047W RTG3P38165 486 aa13.81□□□□□ -0.2
MSF1YPR047W RIM15P43565 1770 aa13.8□□□□□ -0.2
MSF1YPR047W RPO41P13433 1351 aaKnown RBP13.8□□□□□ -0.2
MSF1YPR047W ALD3P54114 506 aa13.8□□□□□ -0.2
MSF1YPR047W MSB4Q12317 492 aa13.8□□□□□ -0.2
MSF1YPR047W AUS1Q08409 1394 aa13.79□□□□□ -0.2
MSF1YPR047W GRX4P32642 244 aa13.79□□□□□ -0.2
MSF1YPR047W TAP42Q04372 366 aa13.79□□□□□ -0.2
MSF1YPR047W SEC3P33332 1336 aaKnown RBP13.78□□□□□ -0.2
MSF1YPR047W RPG1P38249 964 aaKnown RBP13.78□□□□□ -0.2
MSF1YPR047W ATG13Q06628 738 aa13.78□□□□□ -0.2
MSF1YPR047W HIM1Q06674 414 aa13.73□□□□□ -0.21
MSF1YPR047W BUG1Q12191 341 aa13.73□□□□□ -0.21
MSF1YPR047W RAD4P14736 754 aa13.7□□□□□ -0.22
MSF1YPR047W INP54Q08227 384 aaKnown RBP13.7□□□□□ -0.22
MSF1YPR047W OSM1P21375 501 aaKnown RBP13.69□□□□□ -0.22
MSF1YPR047W GRE2Q12068 342 aaKnown RBP13.69□□□□□ -0.22
MSF1YPR047W GRX1P25373 110 aaKnown RBP13.68□□□□□ -0.22
MSF1YPR047W UTP22P53254 1237 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms