RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W SCY1P53009 804 aa8.74□□□□□ -1.01
CIT3YPR001W YMR196WQ04336 1088 aa8.73□□□□□ -1.01
CIT3YPR001W MMP1Q12372 583 aa8.73□□□□□ -1.01
CIT3YPR001W YOL098CQ12496 1037 aa8.73□□□□□ -1.01
CIT3YPR001W YDJ1P25491 409 aaKnown RBP8.72□□□□□ -1.01
CIT3YPR001W YHL050CP38721 697 aa8.72□□□□□ -1.01
CIT3YPR001W YHR219WP38900 624 aa8.72□□□□□ -1.01
CIT3YPR001W FPK1P53739 893 aa8.72□□□□□ -1.01
CIT3YPR001W NIS1P53939 407 aa8.72□□□□□ -1.01
CIT3YPR001W YEL077CQ3E7X8 1277 aa8.72□□□□□ -1.01
CIT3YPR001W ESS1P22696 170 aa8.71□□□□□ -1.01
CIT3YPR001W MAK16P10962 306 aaPredicted RBP8.7□□□□□ -1.02
CIT3YPR001W RRP14P36080 434 aaKnown RBP8.7□□□□□ -1.02
CIT3YPR001W PPX1P38698 397 aa8.7□□□□□ -1.02
CIT3YPR001W OSW7P43611 510 aa8.7□□□□□ -1.02
CIT3YPR001W ATH1P48016 1211 aa8.7□□□□□ -1.02
CIT3YPR001W ECM23Q02710 187 aa8.7□□□□□ -1.02
CIT3YPR001W OYE2Q03558 400 aaKnown RBP8.7□□□□□ -1.02
CIT3YPR001W JIP5Q06214 492 aaPredicted RBP8.7□□□□□ -1.02
CIT3YPR001W RGR1P19263 1082 aa8.69□□□□□ -1.02
CIT3YPR001W FPR3P38911 411 aaKnown RBP8.69□□□□□ -1.02
CIT3YPR001W YGR273CP53329 174 aa8.69□□□□□ -1.02
CIT3YPR001W KAR5Q04746 504 aa8.69□□□□□ -1.02
CIT3YPR001W UBX5Q06682 500 aa8.69□□□□□ -1.02
CIT3YPR001W ARG8P18544 423 aa8.68□□□□□ -1.02
CIT3YPR001W PPG1P32838 368 aa8.68□□□□□ -1.02
CIT3YPR001W PEP12P32854 288 aa8.68□□□□□ -1.02
CIT3YPR001W SEC8P32855 1065 aa8.68□□□□□ -1.02
CIT3YPR001W YOR238WQ08634 303 aa8.68□□□□□ -1.02
CIT3YPR001W TRL1P09880 827 aaKnown RBP8.67□□□□□ -1.02
CIT3YPR001W TOM20P35180 183 aa8.67□□□□□ -1.02
CIT3YPR001W MAG2Q06436 670 aaKnown RBP8.67□□□□□ -1.02
CIT3YPR001W STB3Q12427 513 aa8.67□□□□□ -1.02
CIT3YPR001W YJU3P28321 313 aa8.66□□□□□ -1.02
CIT3YPR001W GUT1P32190 709 aa8.66□□□□□ -1.02
CIT3YPR001W THI12P42883 340 aa8.66□□□□□ -1.02
CIT3YPR001W THI5P43534 340 aa8.66□□□□□ -1.02
CIT3YPR001W THI11P47183 340 aa8.66□□□□□ -1.02
CIT3YPR001W THI13Q07748 340 aa8.66□□□□□ -1.02
CIT3YPR001W WHI5Q12416 295 aa8.66□□□□□ -1.02
CIT3YPR001W SCJ1P25303 377 aa8.65□□□□□ -1.02
CIT3YPR001W GRS1P38088 690 aaKnown RBP8.65□□□□□ -1.02
CIT3YPR001W MDJ2P42834 146 aa8.65□□□□□ -1.02
CIT3YPR001W GRE2Q12068 342 aaKnown RBP8.65□□□□□ -1.02
CIT3YPR001W YPP1P46951 817 aa8.64□□□□□ -1.03
CIT3YPR001W UBX7P38349 436 aa8.63□□□□□ -1.03
CIT3YPR001W MGE1P38523 228 aa8.63□□□□□ -1.03
CIT3YPR001W KTR7P40504 517 aa8.63□□□□□ -1.03
CIT3YPR001W MVP1P40959 511 aaKnown RBP8.63□□□□□ -1.03
CIT3YPR001W SRP40P32583 406 aaPredicted RBP8.61□□□□□ -1.03
CIT3YPR001W TPS3P38426 1054 aaKnown RBP8.61□□□□□ -1.03
CIT3YPR001W GAL2P13181 574 aa8.6□□□□□ -1.03
CIT3YPR001W TSR4P25040 408 aa8.6□□□□□ -1.03
CIT3YPR001W YJR107WP47145 328 aa8.6□□□□□ -1.03
CIT3YPR001W CWC15Q03772 175 aaKnown RBP8.6□□□□□ -1.03
CIT3YPR001W RDS2P19541 446 aaKnown RBP8.59□□□□□ -1.03
CIT3YPR001W TFG1P41895 735 aaPredicted RBP8.59□□□□□ -1.03
CIT3YPR001W MET1P36150 593 aa8.58□□□□□ -1.04
CIT3YPR001W VAC8P39968 578 aa8.58□□□□□ -1.04
CIT3YPR001W TPO2P53283 614 aa8.58□□□□□ -1.04
CIT3YPR001W ALG12P53730 551 aa8.58□□□□□ -1.04
CIT3YPR001W BUD21Q08492 214 aaPredicted RBP8.58□□□□□ -1.04
CIT3YPR001W YKL091CP33324 310 aaKnown RBP8.57□□□□□ -1.04
CIT3YPR001W RSC30P38781 883 aa8.57□□□□□ -1.04
CIT3YPR001W ATG1P53104 897 aa8.57□□□□□ -1.04
CIT3YPR001W GIN4Q12263 1142 aa8.57□□□□□ -1.04
CIT3YPR001W CIT2P08679 460 aa8.57□□□□□ -1.04
CIT3YPR001W NAB3P38996 802 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
CIT3YPR001W VMA1P17255 1071 aaKnown RBP8.56□□□□□ -1.04
CIT3YPR001W SIT4P20604 311 aa8.56□□□□□ -1.04
CIT3YPR001W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
CIT3YPR001W SOL3P38858 249 aa8.55□□□□□ -1.04
CIT3YPR001W IOC3P43596 787 aa8.55□□□□□ -1.04
CIT3YPR001W NAF1P53919 492 aaKnown RBP8.55□□□□□ -1.04
CIT3YPR001W ALD3P54114 506 aa8.55□□□□□ -1.04
CIT3YPR001W PUF6Q04373 656 aaKnown RBP8.55□□□□□ -1.04
CIT3YPR001W SSB1P11484 613 aaKnown RBP8.54□□□□□ -1.04
CIT3YPR001W PDR1P12383 1068 aa8.54□□□□□ -1.04
CIT3YPR001W SSB2P40150 613 aaKnown RBP8.54□□□□□ -1.04
CIT3YPR001W YPR109WQ06104 294 aa8.53□□□□□ -1.04
CIT3YPR001W MCM16Q12262 181 aa8.53□□□□□ -1.04
CIT3YPR001W GAP1P19145 602 aaPredicted RBP8.52□□□□□ -1.05
CIT3YPR001W ALD6P54115 500 aaKnown RBP8.52□□□□□ -1.05
CIT3YPR001W POB3Q04636 552 aaKnown RBP8.52□□□□□ -1.05
CIT3YPR001W NUT2Q06213 157 aa8.52□□□□□ -1.05
CIT3YPR001W MNL2Q12205 849 aa8.52□□□□□ -1.05
CIT3YPR001W PNP1Q05788 311 aa8.51□□□□□ -1.05
CIT3YPR001W CSC1Q06538 782 aa8.51□□□□□ -1.05
CIT3YPR001W BOL3P39724 118 aa8.51□□□□□ -1.05
CIT3YPR001W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
CIT3YPR001W ENV9Q08651 330 aa8.51□□□□□ -1.05
CIT3YPR001W SLX5P32828 619 aaKnown RBP8.5□□□□□ -1.05
CIT3YPR001W YJL049WP47048 450 aa8.5□□□□□ -1.05
CIT3YPR001W NSE3Q05541 303 aa8.5□□□□□ -1.05
CIT3YPR001W MET4P32389 672 aa8.49□□□□□ -1.05
CIT3YPR001W MAP2P38174 421 aaKnown RBP8.49□□□□□ -1.05
CIT3YPR001W TPM2P40414 161 aa8.49□□□□□ -1.05
CIT3YPR001W FYV10P40492 516 aa8.49□□□□□ -1.05
CIT3YPR001W ACF4P47129 309 aa8.49□□□□□ -1.05
CIT3YPR001W UBP10P53874 792 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms