RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W KTR1P27810 393 aaKnown RBP8.71□□□□□ -1.01
HFI1YPL254W HST2P53686 357 aa8.71□□□□□ -1.01
HFI1YPL254W SCJ1P25303 377 aa8.7□□□□□ -1.02
HFI1YPL254W GLN1P32288 370 aaKnown RBP8.7□□□□□ -1.02
HFI1YPL254W STR2P47164 639 aa8.7□□□□□ -1.02
HFI1YPL254W ISM1P48526 1002 aa8.7□□□□□ -1.02
HFI1YPL254W SSA2P10592 639 aaKnown RBP8.7□□□□□ -1.02
HFI1YPL254W KEX2P13134 814 aa8.7□□□□□ -1.02
HFI1YPL254W MMP1Q12372 583 aa8.7□□□□□ -1.02
HFI1YPL254W YPR015CQ12531 247 aa8.69□□□□□ -1.02
HFI1YPL254W TCB3Q03640 1545 aaKnown RBP8.69□□□□□ -1.02
HFI1YPL254W HPC2Q01448 625 aa8.68□□□□□ -1.02
HFI1YPL254W YML082WQ04533 649 aaKnown RBP8.68□□□□□ -1.02
HFI1YPL254W ERF2Q06551 359 aa8.68□□□□□ -1.02
HFI1YPL254W ESS1P22696 170 aa8.67□□□□□ -1.02
HFI1YPL254W SLY41P22215 453 aa8.66□□□□□ -1.02
HFI1YPL254W YNL115CP53925 644 aa8.66□□□□□ -1.02
HFI1YPL254W GCD11P32481 527 aaKnown RBP8.65□□□□□ -1.02
HFI1YPL254W RTF1P53064 558 aa8.65□□□□□ -1.02
HFI1YPL254W BUD20Q08004 166 aaPredicted RBP8.65□□□□□ -1.02
HFI1YPL254W TFB3Q03290 321 aa8.64□□□□□ -1.03
HFI1YPL254W HGH1P48362 394 aaKnown RBP8.64□□□□□ -1.03
HFI1YPL254W PKH3Q03306 898 aaPredicted RBP8.64□□□□□ -1.03
HFI1YPL254W YJU3P28321 313 aa8.62□□□□□ -1.03
HFI1YPL254W BRL1P38770 471 aa8.62□□□□□ -1.03
HFI1YPL254W TY1A-DR4O74302 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-HP0C2I4 478 aaKnown RBP8.61□□□□□ -1.03
HFI1YPL254W TY1A-AP0CX57 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-PR1P0CX58 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-ORP0CX59 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-PR2P0CX60 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-DR5P0CX65 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-ER2P0CX66 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-GR3P0CX67 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-LR1P0CX68 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-MR2P0CX69 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-JR2P47099 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-DR1Q03856 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-ML1Q04706 440 aaKnown RBP8.61□□□□□ -1.03
HFI1YPL254W TY1A-BRQ12217 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-NL2Q12470 440 aa8.61□□□□□ -1.03
HFI1YPL254W TY1A-GR2Q12485 440 aa8.61□□□□□ -1.03
HFI1YPL254W SEC2P17065 759 aa8.6□□□□□ -1.03
HFI1YPL254W PRT1P06103 763 aaKnown RBP8.59□□□□□ -1.03
HFI1YPL254W TY1B-DR4Q07793 1604 aa8.59□□□□□ -1.03
HFI1YPL254W PKC1P24583 1151 aa8.58□□□□□ -1.04
HFI1YPL254W VRP1P37370 817 aa8.58□□□□□ -1.04
HFI1YPL254W TAF7Q05021 590 aa8.57□□□□□ -1.04
HFI1YPL254W ARG8P18544 423 aa8.57□□□□□ -1.04
HFI1YPL254W GYP1Q08484 637 aa8.57□□□□□ -1.04
HFI1YPL254W RAD59Q12223 238 aa8.57□□□□□ -1.04
HFI1YPL254W TRM1P15565 570 aaKnown RBP8.54□□□□□ -1.04
HFI1YPL254W TUB4P53378 473 aa8.54□□□□□ -1.04
HFI1YPL254W PUS6P53294 404 aa8.53□□□□□ -1.04
HFI1YPL254W BCK2P33306 851 aa8.52□□□□□ -1.05
HFI1YPL254W RRN7P40992 514 aa8.52□□□□□ -1.05
HFI1YPL254W TBF1Q02457 562 aa8.52□□□□□ -1.05
HFI1YPL254W AGE1Q04412 482 aa8.52□□□□□ -1.05
HFI1YPL254W LAM6Q08001 693 aa8.52□□□□□ -1.05
HFI1YPL254W HSL1P34244 1518 aa8.51□□□□□ -1.05
HFI1YPL254W RSC30P38781 883 aa8.51□□□□□ -1.05
HFI1YPL254W PAT1P25644 796 aaKnown RBP8.5□□□□□ -1.05
HFI1YPL254W SPT16P32558 1035 aaKnown RBP8.5□□□□□ -1.05
HFI1YPL254W YBL036CP38197 257 aa8.5□□□□□ -1.05
HFI1YPL254W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
HFI1YPL254W SAS4Q04003 481 aa8.5□□□□□ -1.05
HFI1YPL254W PAC1P39946 494 aaKnown RBP8.48□□□□□ -1.05
HFI1YPL254W SPT6P23615 1451 aaKnown RBP8.47□□□□□ -1.05
HFI1YPL254W YJL007CP47080 104 aa8.47□□□□□ -1.05
HFI1YPL254W YDL206WQ12424 762 aa8.47□□□□□ -1.05
HFI1YPL254W CSE4P36012 229 aa8.43□□□□□ -1.06
HFI1YPL254W BIM1P40013 344 aa8.42□□□□□ -1.06
HFI1YPL254W MRF1P30775 413 aaPredicted RBP8.41□□□□□ -1.06
HFI1YPL254W XDJ1P39102 459 aa8.41□□□□□ -1.06
HFI1YPL254W RPA14P50106 137 aa8.41□□□□□ -1.06
HFI1YPL254W KXD1P53158 218 aa8.41□□□□□ -1.06
HFI1YPL254W ALR1Q08269 859 aa8.4□□□□□ -1.06
HFI1YPL254W PDC1P06169 563 aaKnown RBP8.39□□□□□ -1.07
HFI1YPL254W MAK16P10962 306 aaPredicted RBP8.39□□□□□ -1.07
HFI1YPL254W BIO2P32451 375 aa8.39□□□□□ -1.07
HFI1YPL254W ATG32P40458 529 aa8.39□□□□□ -1.07
HFI1YPL254W ERG12P07277 443 aa8.38□□□□□ -1.07
HFI1YPL254W SDH2P21801 266 aa8.38□□□□□ -1.07
HFI1YPL254W YPR097WQ06839 1073 aa8.38□□□□□ -1.07
HFI1YPL254W RLF2Q12495 606 aa8.38□□□□□ -1.07
HFI1YPL254W HIR3P47171 1648 aa8.37□□□□□ -1.07
HFI1YPL254W YNL108CP53929 270 aa8.37□□□□□ -1.07
HFI1YPL254W XRN1P22147 1528 aaKnown RBP8.36□□□□□ -1.07
HFI1YPL254W HXT10P43581 546 aa8.36□□□□□ -1.07
HFI1YPL254W MON2P48563 1636 aaPredicted RBP8.36□□□□□ -1.07
HFI1YPL254W YDJ1P25491 409 aaKnown RBP8.34□□□□□ -1.07
HFI1YPL254W RPL34BP40525 121 aaKnown RBP8.34□□□□□ -1.07
HFI1YPL254W MOD5P07884 428 aa8.33□□□□□ -1.08
HFI1YPL254W TIF1P10081 395 aaKnown RBP8.33□□□□□ -1.08
HFI1YPL254W SWR1Q05471 1514 aa8.33□□□□□ -1.08
HFI1YPL254W SPT5P27692 1063 aaKnown RBP8.32□□□□□ -1.08
HFI1YPL254W RRD1P40454 393 aaKnown RBP8.31□□□□□ -1.08
HFI1YPL254W BDP1P46678 594 aa8.31□□□□□ -1.08
HFI1YPL254W FRK1Q03002 865 aaPredicted RBP8.31□□□□□ -1.08
HFI1YPL254W YEL077CQ3E7X8 1277 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms