RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YJU3P28321 313 aa4.3□□□□□ -1.72
BRO1YPL084W NUD1P32336 851 aa4.3□□□□□ -1.72
BRO1YPL084W ARH1P48360 493 aa4.3□□□□□ -1.72
BRO1YPL084W AIR2Q12476 344 aaKnown RBP4.3□□□□□ -1.72
BRO1YPL084W BIM1P40013 344 aa4.29□□□□□ -1.72
BRO1YPL084W RAD59Q12223 238 aa4.29□□□□□ -1.72
BRO1YPL084W KEX2P13134 814 aa4.29□□□□□ -1.72
BRO1YPL084W ARG8P18544 423 aa4.29□□□□□ -1.72
BRO1YPL084W YBL036CP38197 257 aa4.29□□□□□ -1.72
BRO1YPL084W YNL115CP53925 644 aa4.29□□□□□ -1.72
BRO1YPL084W NPL4P33755 580 aa4.28□□□□□ -1.72
BRO1YPL084W ELP4Q02884 456 aaKnown RBP4.28□□□□□ -1.72
BRO1YPL084W ERF2Q06551 359 aa4.28□□□□□ -1.72
BRO1YPL084W ATG32P40458 529 aa4.27□□□□□ -1.73
BRO1YPL084W RTF1P53064 558 aa4.27□□□□□ -1.73
BRO1YPL084W STR2P47164 639 aa4.26□□□□□ -1.73
BRO1YPL084W ISM1P48526 1002 aa4.26□□□□□ -1.73
BRO1YPL084W RSC30P38781 883 aa4.25□□□□□ -1.73
BRO1YPL084W YJL171CP46992 396 aa4.25□□□□□ -1.73
BRO1YPL084W BNI4P53858 892 aa4.25□□□□□ -1.73
BRO1YPL084W GCD11P32481 527 aaKnown RBP4.25□□□□□ -1.73
BRO1YPL084W TIF1P10081 395 aaKnown RBP4.24□□□□□ -1.73
BRO1YPL084W BIO2P32451 375 aa4.24□□□□□ -1.73
BRO1YPL084W CSE4P36012 229 aa4.24□□□□□ -1.73
BRO1YPL084W RPL34BP40525 121 aaKnown RBP4.24□□□□□ -1.73
BRO1YPL084W LAM6Q08001 693 aa4.24□□□□□ -1.73
BRO1YPL084W BMT6Q12291 365 aa4.24□□□□□ -1.73
BRO1YPL084W TRM1P15565 570 aaKnown RBP4.24□□□□□ -1.73
BRO1YPL084W RAM1P22007 431 aa4.24□□□□□ -1.73
BRO1YPL084W SPT23P35210 1082 aa4.24□□□□□ -1.73
BRO1YPL084W PUS6P53294 404 aa4.24□□□□□ -1.73
BRO1YPL084W YNL108CP53929 270 aa4.24□□□□□ -1.73
BRO1YPL084W PTC2P39966 464 aaKnown RBP4.23□□□□□ -1.73
BRO1YPL084W ERG12P07277 443 aa4.23□□□□□ -1.73
BRO1YPL084W BUD20Q08004 166 aaPredicted RBP4.23□□□□□ -1.73
BRO1YPL084W SEC2P17065 759 aa4.22□□□□□ -1.73
BRO1YPL084W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
BRO1YPL084W TBF1Q02457 562 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-DR4O74302 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-HP0C2I4 478 aaKnown RBP4.22□□□□□ -1.73
BRO1YPL084W TY1A-AP0CX57 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-PR1P0CX58 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-ORP0CX59 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-PR2P0CX60 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-DR5P0CX65 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-ER2P0CX66 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-GR3P0CX67 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-LR1P0CX68 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-MR2P0CX69 440 aa4.22□□□□□ -1.73
BRO1YPL084W RTG2P32608 588 aaKnown RBP4.22□□□□□ -1.73
BRO1YPL084W PRE3P38624 215 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-JR2P47099 440 aa4.22□□□□□ -1.73
BRO1YPL084W TUB4P53378 473 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-DR1Q03856 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-ML1Q04706 440 aaKnown RBP4.22□□□□□ -1.73
BRO1YPL084W TY1A-BRQ12217 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-NL2Q12470 440 aa4.22□□□□□ -1.73
BRO1YPL084W TY1A-GR2Q12485 440 aa4.22□□□□□ -1.73
BRO1YPL084W YDJ1P25491 409 aaKnown RBP4.21□□□□□ -1.74
BRO1YPL084W YPR015CQ12531 247 aa4.21□□□□□ -1.74
BRO1YPL084W MAK16P10962 306 aaPredicted RBP4.21□□□□□ -1.74
BRO1YPL084W AGE1Q04412 482 aa4.2□□□□□ -1.74
BRO1YPL084W YPR204WQ08995 1032 aa4.2□□□□□ -1.74
BRO1YPL084W YML082WQ04533 649 aaKnown RBP4.2□□□□□ -1.74
BRO1YPL084W YDL206WQ12424 762 aa4.2□□□□□ -1.74
BRO1YPL084W PRT1P06103 763 aaKnown RBP4.19□□□□□ -1.74
BRO1YPL084W SUP45P12385 437 aaKnown RBP4.19□□□□□ -1.74
BRO1YPL084W CHL1P22516 861 aaPredicted RBP4.19□□□□□ -1.74
BRO1YPL084W ENO2P00925 437 aaKnown RBP4.18□□□□□ -1.74
BRO1YPL084W SPT5P27692 1063 aaKnown RBP4.18□□□□□ -1.74
BRO1YPL084W RRN7P40992 514 aa4.18□□□□□ -1.74
BRO1YPL084W PAC1P39946 494 aaKnown RBP4.17□□□□□ -1.74
BRO1YPL084W PAT1P25644 796 aaKnown RBP4.16□□□□□ -1.74
BRO1YPL084W CPS1P27614 576 aa4.16□□□□□ -1.74
BRO1YPL084W RPA14P50106 137 aa4.16□□□□□ -1.74
BRO1YPL084W SUB2Q07478 446 aaKnown RBP4.16□□□□□ -1.74
BRO1YPL084W ENO1P00924 437 aaKnown RBP4.16□□□□□ -1.74
BRO1YPL084W SSA4P22202 642 aaKnown RBP4.16□□□□□ -1.74
BRO1YPL084W SPT16P32558 1035 aaKnown RBP4.16□□□□□ -1.74
BRO1YPL084W ALR1Q08269 859 aa4.16□□□□□ -1.74
BRO1YPL084W NAF1P53919 492 aaKnown RBP4.15□□□□□ -1.74
BRO1YPL084W YPR097WQ06839 1073 aa4.15□□□□□ -1.74
BRO1YPL084W GYP1Q08484 637 aa4.15□□□□□ -1.74
BRO1YPL084W TTI1P36097 1038 aa4.15□□□□□ -1.75
BRO1YPL084W RIM21P48565 533 aa4.14□□□□□ -1.75
BRO1YPL084W KXD1P53158 218 aa4.14□□□□□ -1.75
BRO1YPL084W PDC1P06169 563 aaKnown RBP4.14□□□□□ -1.75
BRO1YPL084W ISF1P32488 338 aa4.14□□□□□ -1.75
BRO1YPL084W MRX10Q05648 414 aa4.14□□□□□ -1.75
BRO1YPL084W MCM16Q12262 181 aa4.13□□□□□ -1.75
BRO1YPL084W SSA1P10591 642 aaKnown RBP4.12□□□□□ -1.75
BRO1YPL084W EMP47P43555 445 aa4.12□□□□□ -1.75
BRO1YPL084W HXT10P43581 546 aa4.12□□□□□ -1.75
BRO1YPL084W YPP1P46951 817 aa4.12□□□□□ -1.75
BRO1YPL084W SAS4Q04003 481 aa4.12□□□□□ -1.75
BRO1YPL084W TEC1P18412 486 aa4.11□□□□□ -1.75
BRO1YPL084W VRP1P37370 817 aa4.11□□□□□ -1.75
BRO1YPL084W FIG4P42837 879 aa4.11□□□□□ -1.75
BRO1YPL084W STE20Q03497 939 aaKnown RBP4.1□□□□□ -1.75
BRO1YPL084W ENV9Q08651 330 aa4.1□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms