RNA–Protein interactions for RNA: YPL080C

YPL080C, Transcript of Dubious open reading frame, yeast

Gene YPL080C, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL080C	YPL080C	TFB3	Q03290	321 aa		5.05	□□□□□ -1.6
YPL080C	YPL080C	ERF2	Q06551	359 aa		5.05	□□□□□ -1.6
YPL080C	YPL080C	SIT4	P20604	311 aa		5.04	□□□□□ -1.6
YPL080C	YPL080C	ESS1	P22696	170 aa		5.04	□□□□□ -1.6
YPL080C	YPL080C	HPC2	Q01448	625 aa		5.04	□□□□□ -1.6
YPL080C	YPL080C	TAF7	Q05021	590 aa		5.04	□□□□□ -1.6
YPL080C	YPL080C	TY1A-DR4	O74302	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-H	P0C2I4	478 aa	Known RBP	5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-A	P0CX57	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-PR1	P0CX58	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-OR	P0CX59	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-PR2	P0CX60	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-DR5	P0CX65	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-ER2	P0CX66	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-GR3	P0CX67	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-LR1	P0CX68	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-MR2	P0CX69	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	SSA2	P10592	639 aa	Known RBP	5.03	□□□□□ -1.6
YPL080C	YPL080C	GLN1	P32288	370 aa	Known RBP	5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-JR2	P47099	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-DR1	Q03856	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-ML1	Q04706	440 aa	Known RBP	5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-BR	Q12217	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	MMP1	Q12372	583 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-NL2	Q12470	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	TY1A-GR2	Q12485	440 aa		5.03	□□□□□ -1.6
YPL080C	YPL080C	CHL1	P22516	861 aa	Predicted RBP	5.02	□□□□□ -1.61
YPL080C	YPL080C	YJU3	P28321	313 aa		5.02	□□□□□ -1.61
YPL080C	YPL080C	PKH3	Q03306	898 aa	Predicted RBP	5.02	□□□□□ -1.61
YPL080C	YPL080C	SLY41	P22215	453 aa		5.01	□□□□□ -1.61
YPL080C	YPL080C	PKC1	P24583	1151 aa		5.01	□□□□□ -1.61
YPL080C	YPL080C	NPL4	P33755	580 aa		5.01	□□□□□ -1.61
YPL080C	YPL080C	BRL1	P38770	471 aa		5	□□□□□ -1.61
YPL080C	YPL080C	RTF1	P53064	558 aa		5	□□□□□ -1.61
YPL080C	YPL080C	YNL115C	P53925	644 aa		5	□□□□□ -1.61
YPL080C	YPL080C	BUD20	Q08004	166 aa	Predicted RBP	5	□□□□□ -1.61
YPL080C	YPL080C	SEC2	P17065	759 aa		4.99	□□□□□ -1.61
YPL080C	YPL080C	RAD59	Q12223	238 aa		4.99	□□□□□ -1.61
YPL080C	YPL080C	AGE1	Q04412	482 aa		4.98	□□□□□ -1.61
YPL080C	YPL080C	YML082W	Q04533	649 aa	Known RBP	4.98	□□□□□ -1.61
YPL080C	YPL080C	TRM1	P15565	570 aa	Known RBP	4.97	□□□□□ -1.61
YPL080C	YPL080C	GCD11	P32481	527 aa	Known RBP	4.97	□□□□□ -1.61
YPL080C	YPL080C	ARG8	P18544	423 aa		4.95	□□□□□ -1.62
YPL080C	YPL080C	BIO2	P32451	375 aa		4.95	□□□□□ -1.62
YPL080C	YPL080C	PAC1	P39946	494 aa	Known RBP	4.95	□□□□□ -1.62
YPL080C	YPL080C	RRN7	P40992	514 aa		4.95	□□□□□ -1.62
YPL080C	YPL080C	TUB4	P53378	473 aa		4.95	□□□□□ -1.62
YPL080C	YPL080C	PRT1	P06103	763 aa	Known RBP	4.94	□□□□□ -1.62
YPL080C	YPL080C	HGH1	P48362	394 aa	Known RBP	4.94	□□□□□ -1.62
YPL080C	YPL080C	VRP1	P37370	817 aa		4.93	□□□□□ -1.62
YPL080C	YPL080C	RSC30	P38781	883 aa		4.93	□□□□□ -1.62
YPL080C	YPL080C	TBF1	Q02457	562 aa		4.93	□□□□□ -1.62
YPL080C	YPL080C	LAM6	Q08001	693 aa		4.93	□□□□□ -1.62
YPL080C	YPL080C	YDL206W	Q12424	762 aa		4.93	□□□□□ -1.62
YPL080C	YPL080C	YBL036C	P38197	257 aa		4.92	□□□□□ -1.62
YPL080C	YPL080C	GYP1	Q08484	637 aa		4.92	□□□□□ -1.62
YPL080C	YPL080C	YJL007C	P47080	104 aa		4.91	□□□□□ -1.62
YPL080C	YPL080C	PUS6	P53294	404 aa		4.91	□□□□□ -1.62
YPL080C	YPL080C	SDH2	P21801	266 aa		4.9	□□□□□ -1.63
YPL080C	YPL080C	BCK2	P33306	851 aa		4.9	□□□□□ -1.63
YPL080C	YPL080C	BIM1	P40013	344 aa		4.9	□□□□□ -1.63
YPL080C	YPL080C	ATG32	P40458	529 aa		4.9	□□□□□ -1.63
YPL080C	YPL080C	MAK16	P10962	306 aa	Predicted RBP	4.89	□□□□□ -1.63
YPL080C	YPL080C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
YPL080C	YPL080C	PDC1	P06169	563 aa	Known RBP	4.88	□□□□□ -1.63
YPL080C	YPL080C	ERG12	P07277	443 aa		4.88	□□□□□ -1.63
YPL080C	YPL080C	SPT16	P32558	1035 aa	Known RBP	4.88	□□□□□ -1.63
YPL080C	YPL080C	YNL108C	P53929	270 aa		4.87	□□□□□ -1.63
YPL080C	YPL080C	RLF2	Q12495	606 aa		4.87	□□□□□ -1.63
YPL080C	YPL080C	RPA14	P50106	137 aa		4.86	□□□□□ -1.63
YPL080C	YPL080C	SAS4	Q04003	481 aa		4.86	□□□□□ -1.63
YPL080C	YPL080C	TIF1	P10081	395 aa	Known RBP	4.85	□□□□□ -1.63
YPL080C	YPL080C	YDJ1	P25491	409 aa	Known RBP	4.85	□□□□□ -1.63
YPL080C	YPL080C	PAT1	P25644	796 aa	Known RBP	4.85	□□□□□ -1.63
YPL080C	YPL080C	CSE4	P36012	229 aa		4.85	□□□□□ -1.63
YPL080C	YPL080C	ALR1	Q08269	859 aa		4.85	□□□□□ -1.63
YPL080C	YPL080C	ENO2	P00925	437 aa	Known RBP	4.84	□□□□□ -1.63
YPL080C	YPL080C	RRD1	P40454	393 aa	Known RBP	4.84	□□□□□ -1.63
YPL080C	YPL080C	RPL34B	P40525	121 aa	Known RBP	4.84	□□□□□ -1.63
YPL080C	YPL080C	KXD1	P53158	218 aa		4.84	□□□□□ -1.63
YPL080C	YPL080C	MOD5	P07884	428 aa		4.83	□□□□□ -1.64
YPL080C	YPL080C	CST6	P40535	587 aa		4.83	□□□□□ -1.64
YPL080C	YPL080C	YPR097W	Q06839	1073 aa		4.83	□□□□□ -1.64
YPL080C	YPL080C	YPR204W	Q08995	1032 aa		4.83	□□□□□ -1.64
YPL080C	YPL080C	SUP45	P12385	437 aa	Known RBP	4.82	□□□□□ -1.64
YPL080C	YPL080C	SPT5	P27692	1063 aa	Known RBP	4.82	□□□□□ -1.64
YPL080C	YPL080C	HXT10	P43581	546 aa		4.82	□□□□□ -1.64
YPL080C	YPL080C	FRK1	Q03002	865 aa	Predicted RBP	4.82	□□□□□ -1.64
YPL080C	YPL080C	ISF1	P32488	338 aa		4.81	□□□□□ -1.64
YPL080C	YPL080C	XDJ1	P39102	459 aa		4.81	□□□□□ -1.64
YPL080C	YPL080C	FIG4	P42837	879 aa		4.81	□□□□□ -1.64
YPL080C	YPL080C	BDP1	P46678	594 aa		4.81	□□□□□ -1.64
YPL080C	YPL080C	NAF1	P53919	492 aa	Known RBP	4.81	□□□□□ -1.64
YPL080C	YPL080C	MCM16	Q12262	181 aa		4.81	□□□□□ -1.64
YPL080C	YPL080C	TEC1	P18412	486 aa		4.8	□□□□□ -1.64
YPL080C	YPL080C	MRF1	P30775	413 aa	Predicted RBP	4.8	□□□□□ -1.64
YPL080C	YPL080C	TPD3	P31383	635 aa		4.8	□□□□□ -1.64
YPL080C	YPL080C	RTG2	P32608	588 aa	Known RBP	4.8	□□□□□ -1.64
YPL080C	YPL080C	RIM21	P48565	533 aa		4.8	□□□□□ -1.64
YPL080C	YPL080C	PUS5	Q06244	254 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms