RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W NAP1P25293 417 aaKnown RBP8.83□□□□□ -1
CTF19YPL018W TAF8Q03750 510 aa8.81□□□□□ -1
CTF19YPL018W CDC27P38042 758 aa8.8□□□□□ -1
CTF19YPL018W THI12P42883 340 aa8.8□□□□□ -1
CTF19YPL018W THI5P43534 340 aa8.8□□□□□ -1
CTF19YPL018W THI11P47183 340 aa8.8□□□□□ -1
CTF19YPL018W KIP3P53086 805 aaKnown RBP8.8□□□□□ -1
CTF19YPL018W THI13Q07748 340 aa8.8□□□□□ -1
CTF19YPL018W BCK1Q01389 1478 aa8.79□□□□□ -1
CTF19YPL018W POL5P39985 1022 aaKnown RBP8.79□□□□□ -1
CTF19YPL018W TFC8Q12308 588 aa8.79□□□□□ -1
CTF19YPL018W PTP3P40048 928 aa8.78□□□□□ -1
CTF19YPL018W CFT1Q06632 1357 aaKnown RBP8.77□□□□□ -1.01
CTF19YPL018W HOP09932 586 aa8.77□□□□□ -1.01
CTF19YPL018W YNR029CP53729 429 aaKnown RBP8.77□□□□□ -1.01
CTF19YPL018W SPE2P21182 396 aa8.75□□□□□ -1.01
CTF19YPL018W NUP192P47054 1683 aa8.75□□□□□ -1.01
CTF19YPL018W TY1B-NL2Q99337 1749 aaKnown RBP8.72□□□□□ -1.01
CTF19YPL018W SSP1P38871 571 aa8.72□□□□□ -1.01
CTF19YPL018W DCD1P06773 312 aa8.71□□□□□ -1.02
CTF19YPL018W SCT1P32784 759 aa8.71□□□□□ -1.02
CTF19YPL018W RCM1P53972 490 aa8.7□□□□□ -1.02
CTF19YPL018W USO1P25386 1790 aa8.7□□□□□ -1.02
CTF19YPL018W TY3B-IQ7LHG5 1498 aaKnown RBP8.69□□□□□ -1.02
CTF19YPL018W CHZ1P40019 153 aaPredicted RBP8.68□□□□□ -1.02
CTF19YPL018W YAH1Q12184 172 aaKnown RBP8.68□□□□□ -1.02
CTF19YPL018W YLR419WQ06698 1435 aaKnown RBP8.66□□□□□ -1.02
CTF19YPL018W YIL055CP40523 627 aaKnown RBP8.66□□□□□ -1.02
CTF19YPL018W CPS1P27614 576 aa8.64□□□□□ -1.03
CTF19YPL018W PPH3P32345 308 aa8.64□□□□□ -1.03
CTF19YPL018W YLR271WQ06152 274 aa8.63□□□□□ -1.03
CTF19YPL018W MHP1P43638 1398 aa8.6□□□□□ -1.03
CTF19YPL018W PDS5Q04264 1277 aa8.59□□□□□ -1.03
CTF19YPL018W PSK1P31374 1356 aa8.59□□□□□ -1.03
CTF19YPL018W RSM7P47150 247 aa8.58□□□□□ -1.04
CTF19YPL018W LEU2P04173 364 aaPredicted RBP8.57□□□□□ -1.04
CTF19YPL018W RTG3P38165 486 aa8.57□□□□□ -1.04
CTF19YPL018W FKH1P40466 484 aa8.55□□□□□ -1.04
CTF19YPL018W CSE4P36012 229 aa8.54□□□□□ -1.04
CTF19YPL018W MTR4P47047 1073 aaKnown RBP8.54□□□□□ -1.04
CTF19YPL018W BCH2P36122 765 aa8.53□□□□□ -1.04
CTF19YPL018W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
CTF19YPL018W PRP45P28004 379 aaPredicted RBP8.52□□□□□ -1.05
CTF19YPL018W RPS24AP0CX31 135 aaKnown RBP8.51□□□□□ -1.05
CTF19YPL018W RPS24BP0CX32 135 aaKnown RBP8.51□□□□□ -1.05
CTF19YPL018W APP1P53933 587 aa8.5□□□□□ -1.05
CTF19YPL018W ADE6P38972 1358 aaKnown RBP8.49□□□□□ -1.05
CTF19YPL018W LEU3P08638 886 aa8.49□□□□□ -1.05
CTF19YPL018W PRP5P21372 849 aaPredicted RBP8.49□□□□□ -1.05
CTF19YPL018W PSD2P53037 1138 aaKnown RBP8.49□□□□□ -1.05
CTF19YPL018W ENT1Q12518 454 aa8.49□□□□□ -1.05
CTF19YPL018W SEC3P33332 1336 aaKnown RBP8.49□□□□□ -1.05
CTF19YPL018W YML133CQ03099 1374 aa8.48□□□□□ -1.05
CTF19YPL018W YLL067CQ07888 1374 aa8.48□□□□□ -1.05
CTF19YPL018W YLL066CQ99208 1374 aa8.48□□□□□ -1.05
CTF19YPL018W RTF1P53064 558 aa8.48□□□□□ -1.05
CTF19YPL018W PRP43P53131 767 aaKnown RBP8.48□□□□□ -1.05
CTF19YPL018W PDI1P17967 522 aaKnown RBP8.47□□□□□ -1.05
CTF19YPL018W SPT7P35177 1332 aa8.47□□□□□ -1.05
CTF19YPL018W GAS4Q08271 471 aa8.45□□□□□ -1.06
CTF19YPL018W ENV9Q08651 330 aa8.45□□□□□ -1.06
CTF19YPL018W DPS1P04802 557 aaKnown RBP8.44□□□□□ -1.06
CTF19YPL018W NST1P53935 1240 aa8.44□□□□□ -1.06
CTF19YPL018W AI2P03876 854 aa8.43□□□□□ -1.06
CTF19YPL018W MSB3P48566 633 aaPredicted RBP8.43□□□□□ -1.06
CTF19YPL018W KAR2P16474 682 aaKnown RBP8.42□□□□□ -1.06
CTF19YPL018W TAP42Q04372 366 aa8.42□□□□□ -1.06
CTF19YPL018W GRX4P32642 244 aa8.41□□□□□ -1.06
CTF19YPL018W HIM1Q06674 414 aa8.41□□□□□ -1.06
CTF19YPL018W TCB1Q12466 1186 aa8.41□□□□□ -1.06
CTF19YPL018W MAP2P38174 421 aaKnown RBP8.4□□□□□ -1.06
CTF19YPL018W MGA2P40578 1113 aa8.4□□□□□ -1.06
CTF19YPL018W UBP10P53874 792 aaPredicted RBP8.4□□□□□ -1.06
CTF19YPL018W SLM3Q12093 417 aa8.4□□□□□ -1.06
CTF19YPL018W TRK1P12685 1235 aa8.39□□□□□ -1.07
CTF19YPL018W YEF3P16521 1044 aaKnown RBP8.39□□□□□ -1.07
CTF19YPL018W PAP2P53632 584 aaKnown RBP8.39□□□□□ -1.07
CTF19YPL018W IMH1Q06704 911 aaKnown RBP8.39□□□□□ -1.07
CTF19YPL018W ENP1P38333 483 aaKnown RBP8.38□□□□□ -1.07
CTF19YPL018W EPS1P40557 701 aa8.38□□□□□ -1.07
CTF19YPL018W SCY1P53009 804 aa8.37□□□□□ -1.07
CTF19YPL018W CST9Q06032 482 aa8.37□□□□□ -1.07
CTF19YPL018W XKS1P42826 600 aa8.36□□□□□ -1.07
CTF19YPL018W AUS1Q08409 1394 aa8.35□□□□□ -1.07
CTF19YPL018W DMA1P38823 416 aa8.35□□□□□ -1.07
CTF19YPL018W IES2P40154 320 aa8.35□□□□□ -1.07
CTF19YPL018W LEO1P38439 464 aa8.34□□□□□ -1.07
CTF19YPL018W SIS1P25294 352 aaKnown RBP8.33□□□□□ -1.08
CTF19YPL018W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
CTF19YPL018W BBC1P47068 1157 aa8.33□□□□□ -1.08
CTF19YPL018W MLP1Q02455 1875 aaKnown RBP8.32□□□□□ -1.08
CTF19YPL018W RRP5Q05022 1729 aaKnown RBP8.32□□□□□ -1.08
CTF19YPL018W BDF1P35817 686 aa8.32□□□□□ -1.08
CTF19YPL018W RSF2P46974 1380 aa8.32□□□□□ -1.08
CTF19YPL018W RPO41P13433 1351 aaKnown RBP8.3□□□□□ -1.08
CTF19YPL018W TY4B-HP0C2J7 1802 aa8.29□□□□□ -1.08
CTF19YPL018W TY4B-JP47024 1803 aa8.29□□□□□ -1.08
CTF19YPL018W GLN1P32288 370 aaKnown RBP8.29□□□□□ -1.08
CTF19YPL018W YKL133CP36066 463 aa8.29□□□□□ -1.08
CTF19YPL018W RCR1P38212 213 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms