RNA–Protein interactions for RNA: YOR362C

PRE10, Transcript of Alpha 7 subunit of the 20S proteasome, yeastyeast

Gene PRE10, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE10YOR362C CPS1P27614 576 aa10.3□□□□□ -0.76
PRE10YOR362C PSK1P31374 1356 aa10.29□□□□□ -0.76
PRE10YOR362C PDS5Q04264 1277 aa10.29□□□□□ -0.76
PRE10YOR362C SEC3P33332 1336 aaKnown RBP10.29□□□□□ -0.76
PRE10YOR362C PPH3P32345 308 aa10.26□□□□□ -0.77
PRE10YOR362C LEU2P04173 364 aaPredicted RBP10.24□□□□□ -0.77
PRE10YOR362C FKH1P40466 484 aa10.23□□□□□ -0.77
PRE10YOR362C RTG3P38165 486 aa10.21□□□□□ -0.77
PRE10YOR362C MTR4P47047 1073 aaKnown RBP10.21□□□□□ -0.77
PRE10YOR362C PTP3P40048 928 aa10.18□□□□□ -0.78
PRE10YOR362C MLP1Q02455 1875 aaKnown RBP10.17□□□□□ -0.78
PRE10YOR362C ADE6P38972 1358 aaKnown RBP10.16□□□□□ -0.78
PRE10YOR362C SPT7P35177 1332 aa10.15□□□□□ -0.78
PRE10YOR362C PDI1P17967 522 aaKnown RBP10.15□□□□□ -0.78
PRE10YOR362C CSE4P36012 229 aa10.15□□□□□ -0.78
PRE10YOR362C RTF1P53064 558 aa10.15□□□□□ -0.78
PRE10YOR362C PRP43P53131 767 aaKnown RBP10.15□□□□□ -0.78
PRE10YOR362C YML133CQ03099 1374 aa10.14□□□□□ -0.79
PRE10YOR362C YLL067CQ07888 1374 aa10.14□□□□□ -0.79
PRE10YOR362C YLL066CQ99208 1374 aa10.14□□□□□ -0.79
PRE10YOR362C PSD2P53037 1138 aaKnown RBP10.14□□□□□ -0.79
PRE10YOR362C RPS24AP0CX31 135 aaKnown RBP10.11□□□□□ -0.79
PRE10YOR362C RPS24BP0CX32 135 aaKnown RBP10.11□□□□□ -0.79
PRE10YOR362C PRP45P28004 379 aaPredicted RBP10.11□□□□□ -0.79
PRE10YOR362C LEU3P08638 886 aa10.1□□□□□ -0.79
PRE10YOR362C GRX4P32642 244 aa10.1□□□□□ -0.79
PRE10YOR362C TAP42Q04372 366 aa10.1□□□□□ -0.79
PRE10YOR362C PRP5P21372 849 aaPredicted RBP10.09□□□□□ -0.79
PRE10YOR362C YAH1Q12184 172 aaKnown RBP10.09□□□□□ -0.79
PRE10YOR362C KAR2P16474 682 aaKnown RBP10.07□□□□□ -0.8
PRE10YOR362C ENP1P38333 483 aaKnown RBP10.07□□□□□ -0.8
PRE10YOR362C ENT1Q12518 454 aa10.05□□□□□ -0.8
PRE10YOR362C DPS1P04802 557 aaKnown RBP10.04□□□□□ -0.8
PRE10YOR362C NST1P53935 1240 aa10.04□□□□□ -0.8
PRE10YOR362C TY4B-HP0C2J7 1802 aa10.04□□□□□ -0.8
PRE10YOR362C TY4B-JP47024 1803 aa10.04□□□□□ -0.8
PRE10YOR362C REB1P21538 810 aa10.03□□□□□ -0.8
PRE10YOR362C RRP5Q05022 1729 aaKnown RBP10.03□□□□□ -0.8
PRE10YOR362C GAS4Q08271 471 aa10.03□□□□□ -0.8
PRE10YOR362C YEF3P16521 1044 aaKnown RBP10.01□□□□□ -0.81
PRE10YOR362C MSB3P48566 633 aaPredicted RBP10.01□□□□□ -0.81
PRE10YOR362C APP1P53933 587 aa10.01□□□□□ -0.81
PRE10YOR362C SLM3Q12093 417 aa10.01□□□□□ -0.81
PRE10YOR362C TCB1Q12466 1186 aa10.01□□□□□ -0.81
PRE10YOR362C TRK1P12685 1235 aa10□□□□□ -0.81
PRE10YOR362C PAP2P53632 584 aaKnown RBP10□□□□□ -0.81
PRE10YOR362C IOC4Q04213 475 aa10□□□□□ -0.81
PRE10YOR362C HIM1Q06674 414 aa10□□□□□ -0.81
PRE10YOR362C ENV9Q08651 330 aa10□□□□□ -0.81
PRE10YOR362C AUS1Q08409 1394 aa9.99□□□□□ -0.81
PRE10YOR362C RPO41P13433 1351 aaKnown RBP9.96□□□□□ -0.82
PRE10YOR362C IMH1Q06704 911 aaKnown RBP9.95□□□□□ -0.82
PRE10YOR362C RSF2P46974 1380 aa9.94□□□□□ -0.82
PRE10YOR362C XKS1P42826 600 aa9.93□□□□□ -0.82
PRE10YOR362C PRY3P47033 881 aa9.93□□□□□ -0.82
PRE10YOR362C YRF1-2P40105 1681 aa9.93□□□□□ -0.82
PRE10YOR362C IES2P40154 320 aa9.92□□□□□ -0.82
PRE10YOR362C RTR1P40084 226 aaPredicted RBP9.91□□□□□ -0.82
PRE10YOR362C YIL055CP40523 627 aaKnown RBP9.91□□□□□ -0.82
PRE10YOR362C RPP0P05317 312 aaKnown RBP9.9□□□□□ -0.82
PRE10YOR362C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
PRE10YOR362C NSR1P27476 414 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
PRE10YOR362C AKL1P38080 1108 aaKnown RBP9.88□□□□□ -0.83
PRE10YOR362C MEC3Q02574 474 aa9.88□□□□□ -0.83
PRE10YOR362C YDL144CQ07589 356 aa9.88□□□□□ -0.83
PRE10YOR362C FKS3Q04952 1785 aa9.88□□□□□ -0.83
PRE10YOR362C DSD1P53095 428 aa9.87□□□□□ -0.83
PRE10YOR362C RRP46P53256 223 aaPredicted RBP9.87□□□□□ -0.83
PRE10YOR362C CTF4Q01454 927 aa9.87□□□□□ -0.83
PRE10YOR362C SNF2P22082 1703 aa9.87□□□□□ -0.83
PRE10YOR362C PRI1P10363 409 aa9.86□□□□□ -0.83
PRE10YOR362C SIR4P11978 1358 aa9.86□□□□□ -0.83
PRE10YOR362C ROM2P51862 1356 aaKnown RBP9.86□□□□□ -0.83
PRE10YOR362C YIL177CP40434 1758 aa9.86□□□□□ -0.83
PRE10YOR362C YJL225CP40889 1758 aa9.86□□□□□ -0.83
PRE10YOR362C PRD1P25375 712 aa9.85□□□□□ -0.83
PRE10YOR362C YKL133CP36066 463 aa9.85□□□□□ -0.83
PRE10YOR362C RCR1P38212 213 aa9.85□□□□□ -0.83
PRE10YOR362C URB1P34241 1764 aaKnown RBP9.85□□□□□ -0.83
PRE10YOR362C HSP104P31539 908 aaKnown RBP9.84□□□□□ -0.83
PRE10YOR362C VPS27P40343 622 aaKnown RBP9.84□□□□□ -0.83
PRE10YOR362C MPP10P47083 593 aaKnown RBP9.84□□□□□ -0.83
PRE10YOR362C APC1P53886 1748 aa9.84□□□□□ -0.83
PRE10YOR362C AOS1Q06624 347 aa9.83□□□□□ -0.84
PRE10YOR362C CDC45Q08032 650 aa9.83□□□□□ -0.84
PRE10YOR362C PRS1P32895 427 aaKnown RBP9.81□□□□□ -0.84
PRE10YOR362C AAD16Q02895 342 aa9.81□□□□□ -0.84
PRE10YOR362C YRF1-4O13559 1382 aa9.8□□□□□ -0.84
PRE10YOR362C NTH2P35172 780 aa9.79□□□□□ -0.84
PRE10YOR362C YNL050CP53952 270 aa9.79□□□□□ -0.84
PRE10YOR362C DOT5P40553 215 aa9.78□□□□□ -0.84
PRE10YOR362C YMR074CQ04773 145 aa9.78□□□□□ -0.84
PRE10YOR362C THI22Q06490 572 aa9.78□□□□□ -0.84
PRE10YOR362C ATG13Q06628 738 aa9.78□□□□□ -0.84
PRE10YOR362C GLN1P32288 370 aaKnown RBP9.77□□□□□ -0.85
PRE10YOR362C YRB30P53107 440 aaPredicted RBP9.77□□□□□ -0.85
PRE10YOR362C LAM6Q08001 693 aa9.77□□□□□ -0.85
PRE10YOR362C INP54Q08227 384 aaKnown RBP9.77□□□□□ -0.85
PRE10YOR362C TPD3P31383 635 aa9.76□□□□□ -0.85
PRE10YOR362C MAM1P40065 302 aa9.76□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 70.1 ms