RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W RAD2P07276 1031 aa7.28□□□□□ -1.24
VPS5YOR069W SPE2P21182 396 aa7.28□□□□□ -1.24
VPS5YOR069W AIM44Q99299 758 aa7.28□□□□□ -1.24
VPS5YOR069W PDR11P40550 1411 aa7.28□□□□□ -1.24
VPS5YOR069W CTR9P89105 1077 aa7.28□□□□□ -1.24
VPS5YOR069W NOT3P06102 836 aaKnown RBP7.27□□□□□ -1.25
VPS5YOR069W ARL1P38116 183 aaKnown RBP7.27□□□□□ -1.25
VPS5YOR069W EDE1P34216 1381 aa7.27□□□□□ -1.25
VPS5YOR069W DOP1Q03921 1698 aa7.26□□□□□ -1.25
VPS5YOR069W YEF3P16521 1044 aaKnown RBP7.26□□□□□ -1.25
VPS5YOR069W KNS1P32350 737 aaPredicted RBP7.25□□□□□ -1.25
VPS5YOR069W CHC1P22137 1653 aaKnown RBP7.25□□□□□ -1.25
VPS5YOR069W BNR1P40450 1375 aa7.25□□□□□ -1.25
VPS5YOR069W LSP1Q12230 341 aaKnown RBP7.24□□□□□ -1.25
VPS5YOR069W DAL5P15365 543 aa7.23□□□□□ -1.25
VPS5YOR069W FKH1P40466 484 aa7.23□□□□□ -1.25
VPS5YOR069W SAP155P43612 1002 aa7.23□□□□□ -1.25
VPS5YOR069W YPP1P46951 817 aa7.23□□□□□ -1.25
VPS5YOR069W NOP58Q12499 511 aaKnown RBP7.23□□□□□ -1.25
VPS5YOR069W POL32P47110 350 aa7.23□□□□□ -1.25
VPS5YOR069W RLF2Q12495 606 aa7.23□□□□□ -1.25
VPS5YOR069W YIL092WP40497 633 aa7.22□□□□□ -1.25
VPS5YOR069W SNF2P22082 1703 aa7.22□□□□□ -1.25
VPS5YOR069W TRM3Q07527 1436 aa7.22□□□□□ -1.25
VPS5YOR069W CHZ1P40019 153 aaPredicted RBP7.22□□□□□ -1.25
VPS5YOR069W RTR1P40084 226 aaPredicted RBP7.22□□□□□ -1.25
VPS5YOR069W BUD27P43573 796 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
VPS5YOR069W TEA1P47988 759 aa7.22□□□□□ -1.25
VPS5YOR069W MLP1Q02455 1875 aaKnown RBP7.21□□□□□ -1.25
VPS5YOR069W VMR1P38735 1592 aa7.21□□□□□ -1.25
VPS5YOR069W NUP192P47054 1683 aa7.2□□□□□ -1.26
VPS5YOR069W TPD3P31383 635 aa7.19□□□□□ -1.26
VPS5YOR069W RRP46P53256 223 aaPredicted RBP7.19□□□□□ -1.26
VPS5YOR069W YAP3P38749 330 aa7.18□□□□□ -1.26
VPS5YOR069W ITC1P53125 1264 aa7.18□□□□□ -1.26
VPS5YOR069W HAP1P0CE41 1502 aa7.18□□□□□ -1.26
VPS5YOR069W NAP1P25293 417 aaKnown RBP7.18□□□□□ -1.26
VPS5YOR069W IML1P47170 1584 aa7.18□□□□□ -1.26
VPS5YOR069W MTC1P47018 478 aaKnown RBP7.17□□□□□ -1.26
VPS5YOR069W PUF6Q04373 656 aaKnown RBP7.17□□□□□ -1.26
VPS5YOR069W YGR130CP53278 816 aa7.17□□□□□ -1.26
VPS5YOR069W TAF8Q03750 510 aa7.17□□□□□ -1.26
VPS5YOR069W KRE5P22023 1365 aa7.16□□□□□ -1.26
VPS5YOR069W COG8Q04632 607 aa7.15□□□□□ -1.26
VPS5YOR069W THI22Q06490 572 aa7.15□□□□□ -1.26
VPS5YOR069W CSE4P36012 229 aa7.14□□□□□ -1.27
VPS5YOR069W LCD1Q04377 747 aa7.14□□□□□ -1.27
VPS5YOR069W SEC7P11075 2009 aaKnown RBP7.14□□□□□ -1.27
VPS5YOR069W YRF1-1P0CX20 1796 aa7.14□□□□□ -1.27
VPS5YOR069W YRF1-5P0CX21 1796 aa7.14□□□□□ -1.27
VPS5YOR069W YRF1-8P0CX22 1796 aa7.14□□□□□ -1.27
VPS5YOR069W SRS2P12954 1174 aa7.13□□□□□ -1.27
VPS5YOR069W PRD1P25375 712 aa7.13□□□□□ -1.27
VPS5YOR069W AVT3P36062 692 aa7.13□□□□□ -1.27
VPS5YOR069W RSC1P53236 928 aa7.13□□□□□ -1.27
VPS5YOR069W HEF3P53978 1044 aaKnown RBP7.13□□□□□ -1.27
VPS5YOR069W HAP5Q02516 242 aa7.13□□□□□ -1.27
VPS5YOR069W MAK21Q12176 1025 aaKnown RBP7.11□□□□□ -1.27
VPS5YOR069W YML133CQ03099 1374 aa7.11□□□□□ -1.27
VPS5YOR069W YLL067CQ07888 1374 aa7.11□□□□□ -1.27
VPS5YOR069W YLL066CQ99208 1374 aa7.11□□□□□ -1.27
VPS5YOR069W MET5P47169 1442 aa7.1□□□□□ -1.27
VPS5YOR069W KAR2P16474 682 aaKnown RBP7.1□□□□□ -1.27
VPS5YOR069W PIL1P53252 339 aaKnown RBP7.1□□□□□ -1.27
VPS5YOR069W MDG1P53885 366 aa7.1□□□□□ -1.27
VPS5YOR069W TPM2P40414 161 aa7.1□□□□□ -1.27
VPS5YOR069W ESC2Q06340 456 aa7.1□□□□□ -1.27
VPS5YOR069W URN1Q06525 465 aaKnown RBP7.1□□□□□ -1.27
VPS5YOR069W RTT109Q07794 436 aa7.1□□□□□ -1.27
VPS5YOR069W SIR4P11978 1358 aa7.09□□□□□ -1.27
VPS5YOR069W NUP188P52593 1655 aaKnown RBP7.09□□□□□ -1.27
VPS5YOR069W RAD9P14737 1309 aa7.09□□□□□ -1.27
VPS5YOR069W RKM3P38222 552 aa7.08□□□□□ -1.28
VPS5YOR069W RAD26P40352 1085 aa7.08□□□□□ -1.28
VPS5YOR069W ALD4P46367 519 aaKnown RBP7.08□□□□□ -1.28
VPS5YOR069W PAP2P53632 584 aaKnown RBP7.08□□□□□ -1.28
VPS5YOR069W YRF1-4O13559 1382 aa7.08□□□□□ -1.28
VPS5YOR069W ECM16Q04217 1267 aaKnown RBP7.08□□□□□ -1.28
VPS5YOR069W NUP145P49687 1317 aa7.08□□□□□ -1.28
VPS5YOR069W MCM2P29469 868 aa7.07□□□□□ -1.28
VPS5YOR069W RRT14P40470 206 aa7.07□□□□□ -1.28
VPS5YOR069W TRP5P00931 707 aaKnown RBP7.06□□□□□ -1.28
VPS5YOR069W DLD1P32891 587 aa7.06□□□□□ -1.28
VPS5YOR069W SPT21P35209 758 aa7.06□□□□□ -1.28
VPS5YOR069W RPN1P38764 993 aaKnown RBP7.06□□□□□ -1.28
VPS5YOR069W YGL081WP53156 320 aa7.06□□□□□ -1.28
VPS5YOR069W BCK1Q01389 1478 aa7.05□□□□□ -1.28
VPS5YOR069W ROM2P51862 1356 aaKnown RBP7.05□□□□□ -1.28
VPS5YOR069W MIC60P36112 540 aa7.05□□□□□ -1.28
VPS5YOR069W BDH2P39713 417 aa7.05□□□□□ -1.28
VPS5YOR069W CIR1P42940 261 aa7.05□□□□□ -1.28
VPS5YOR069W NKP2Q06162 153 aa7.05□□□□□ -1.28
VPS5YOR069W RAD50P12753 1312 aa7.05□□□□□ -1.28
VPS5YOR069W RPN12P32496 274 aa7.05□□□□□ -1.28
VPS5YOR069W SMC3P47037 1230 aa7.05□□□□□ -1.28
VPS5YOR069W NPA3P47122 385 aa7.05□□□□□ -1.28
VPS5YOR069W GCR2Q01722 534 aa7.04□□□□□ -1.28
VPS5YOR069W HOS3Q02959 697 aaKnown RBP7.04□□□□□ -1.28
VPS5YOR069W HIM1Q06674 414 aa7.04□□□□□ -1.28
VPS5YOR069W ILV3P39522 585 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms