RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W TY1B-BRQ12193 1756 aa8.73□□□□□ -1.01
RCL1YOL010W TY1B-GR3Q12316 1755 aa8.73□□□□□ -1.01
RCL1YOL010W TY1B-ORQ92393 1755 aa8.73□□□□□ -1.01
RCL1YOL010W TY2B-LR1P0C2J3 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-FP0CX63 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-GR2P0CX64 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-CP25384 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-DR2Q03494 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY1B-DR1Q03855 1755 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-DR3Q07791 1770 aaKnown RBP8.7□□□□□ -1.02
RCL1YOL010W TY2B-OR1Q12113 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-DR1Q12472 1770 aa8.7□□□□□ -1.02
RCL1YOL010W TY2B-OR2Q12501 1770 aa8.7□□□□□ -1.02
RCL1YOL010W SAS4Q04003 481 aa8.69□□□□□ -1.02
RCL1YOL010W YLR326WQ06170 240 aaKnown RBP8.69□□□□□ -1.02
RCL1YOL010W DRS2P39524 1355 aa8.68□□□□□ -1.02
RCL1YOL010W SSN2P38931 1420 aa8.67□□□□□ -1.02
RCL1YOL010W VHR2P40041 505 aa8.67□□□□□ -1.02
RCL1YOL010W YEL077CQ3E7X8 1277 aa8.65□□□□□ -1.02
RCL1YOL010W UBP14P38237 781 aaKnown RBP8.64□□□□□ -1.03
RCL1YOL010W PCS60P38137 543 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
RCL1YOL010W DNF2Q12675 1612 aa8.62□□□□□ -1.03
RCL1YOL010W RAD54P32863 898 aa8.6□□□□□ -1.03
RCL1YOL010W SET1P38827 1080 aaKnown RBP8.6□□□□□ -1.03
RCL1YOL010W TRM732Q03496 1420 aa8.6□□□□□ -1.03
RCL1YOL010W VPS15P22219 1454 aa8.59□□□□□ -1.03
RCL1YOL010W TY1B-HO13535 1793 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-DR5P0C2I2 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-DR6P0C2I3 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-LR2P0C2I5 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-LR3P0C2I6 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W TY1B-PR1P0C2I9 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W TY1B-PR2P0C2J0 1756 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-PR3P0C2J1 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W YRF1-1P0CX20 1796 aa8.58□□□□□ -1.04
RCL1YOL010W YRF1-5P0CX21 1796 aa8.58□□□□□ -1.04
RCL1YOL010W YRF1-8P0CX22 1796 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-JR1P47098 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-ML2Q03434 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W TY1B-ER1Q03612 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-ML1Q04711 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W TY1B-GR2Q12269 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-OLQ12273 1755 aa8.58□□□□□ -1.04
RCL1YOL010W TY1B-PLQ12414 1755 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W RPP1BP10622 106 aaKnown RBP8.58□□□□□ -1.04
RCL1YOL010W MRF1P30775 413 aaPredicted RBP8.57□□□□□ -1.04
RCL1YOL010W MMS22Q06164 1454 aa8.57□□□□□ -1.04
RCL1YOL010W TY2B-BQ12491 1770 aa8.56□□□□□ -1.04
RCL1YOL010W BUD20Q08004 166 aaPredicted RBP8.54□□□□□ -1.04
RCL1YOL010W NUP159P40477 1460 aa8.53□□□□□ -1.04
RCL1YOL010W YPL062WQ02781 134 aa8.53□□□□□ -1.04
RCL1YOL010W PRT1P06103 763 aaKnown RBP8.52□□□□□ -1.05
RCL1YOL010W YRR1Q12172 810 aa8.52□□□□□ -1.05
RCL1YOL010W TOP2P06786 1428 aaKnown RBP8.52□□□□□ -1.05
RCL1YOL010W YOR093CQ12275 1648 aa8.51□□□□□ -1.05
RCL1YOL010W TY1B-DR3Q99231 1755 aa8.5□□□□□ -1.05
RCL1YOL010W PEX21P50091 288 aa8.49□□□□□ -1.05
RCL1YOL010W STR2P47164 639 aa8.48□□□□□ -1.05
RCL1YOL010W ERG12P07277 443 aa8.47□□□□□ -1.05
RCL1YOL010W AIR1P40507 360 aaKnown RBP8.46□□□□□ -1.06
RCL1YOL010W BRE2P43132 505 aa8.46□□□□□ -1.06
RCL1YOL010W ISM1P48526 1002 aa8.46□□□□□ -1.06
RCL1YOL010W YDR090CQ03193 310 aa8.45□□□□□ -1.06
RCL1YOL010W KIC1P38692 1080 aa8.44□□□□□ -1.06
RCL1YOL010W NTE1Q04958 1679 aa8.43□□□□□ -1.06
RCL1YOL010W CST6P40535 587 aa8.43□□□□□ -1.06
RCL1YOL010W CLA4P48562 842 aa8.43□□□□□ -1.06
RCL1YOL010W GAR1P28007 205 aaKnown RBP8.42□□□□□ -1.06
RCL1YOL010W NUD1P32336 851 aa8.42□□□□□ -1.06
RCL1YOL010W NUP170P38181 1502 aa8.4□□□□□ -1.06
RCL1YOL010W TUM1Q08686 304 aaKnown RBP8.4□□□□□ -1.06
RCL1YOL010W GAP1P19145 602 aaPredicted RBP8.39□□□□□ -1.07
RCL1YOL010W GBP2P25555 427 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07 RIP-Chip
RCL1YOL010W GCR2Q01722 534 aa8.39□□□□□ -1.07
RCL1YOL010W TY1B-JR2P47100 1755 aaKnown RBP8.38□□□□□ -1.07
RCL1YOL010W TY1B-ER2Q03619 1755 aa8.38□□□□□ -1.07
RCL1YOL010W TY1B-MR1Q04214 1755 aa8.38□□□□□ -1.07
RCL1YOL010W TY1B-MR2Q04670 1755 aaKnown RBP8.38□□□□□ -1.07
RCL1YOL010W TY1B-LR1Q12088 1755 aaKnown RBP8.38□□□□□ -1.07
RCL1YOL010W TY1B-NL1Q12112 1755 aa8.38□□□□□ -1.07
RCL1YOL010W TY1B-GR1Q12141 1755 aa8.38□□□□□ -1.07
RCL1YOL010W TY1B-BLQ12490 1755 aa8.38□□□□□ -1.07
RCL1YOL010W CSC1Q06538 782 aa8.38□□□□□ -1.07
RCL1YOL010W TFB4Q12004 338 aa8.38□□□□□ -1.07
RCL1YOL010W SPP41P38904 1435 aa8.37□□□□□ -1.07
RCL1YOL010W NPL4P33755 580 aa8.37□□□□□ -1.07
RCL1YOL010W RPO21P04050 1733 aaKnown RBP8.36□□□□□ -1.07
RCL1YOL010W LAM6Q08001 693 aa8.35□□□□□ -1.07
RCL1YOL010W GCD11P32481 527 aaKnown RBP8.34□□□□□ -1.07
RCL1YOL010W TY1A-DR4O74302 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-HP0C2I4 478 aaKnown RBP8.33□□□□□ -1.08
RCL1YOL010W TY1A-AP0CX57 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-PR1P0CX58 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-ORP0CX59 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-PR2P0CX60 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-DR5P0CX65 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-ER2P0CX66 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-GR3P0CX67 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-LR1P0CX68 440 aa8.33□□□□□ -1.08
RCL1YOL010W TY1A-MR2P0CX69 440 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 207.8 ms