RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM23, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM23YNR017W GLN1P32288 370 aaKnown RBP15.12■□□□□ 0.01
TIM23YNR017W PPH3P32345 308 aa15.12■□□□□ 0.01
TIM23YNR017W RRP5Q05022 1729 aaKnown RBP15.12■□□□□ 0.01
TIM23YNR017W PSK1P31374 1356 aa15.11■□□□□ 0.01
TIM23YNR017W SCT1P32784 759 aa15.07■□□□□ 0
TIM23YNR017W MLP1Q02455 1875 aaKnown RBP15.06■□□□□ 0
TIM23YNR017W CHZ1P40019 153 aaPredicted RBP15.05■□□□□ -0
TIM23YNR017W YRF1-2P40105 1681 aa15.03■□□□□ -0
TIM23YNR017W APP1P53933 587 aa15.02■□□□□ -0
TIM23YNR017W POL5P39985 1022 aaKnown RBP15.01□□□□□ -0.01
TIM23YNR017W ADE6P38972 1358 aaKnown RBP15□□□□□ -0.01
TIM23YNR017W REB1P21538 810 aa15□□□□□ -0.01
TIM23YNR017W YIL055CP40523 627 aaKnown RBP15□□□□□ -0.01
TIM23YNR017W ENT1Q12518 454 aa14.96□□□□□ -0.01
TIM23YNR017W LEU2P04173 364 aaPredicted RBP14.94□□□□□ -0.02
TIM23YNR017W PRP45P28004 379 aaPredicted RBP14.94□□□□□ -0.02
TIM23YNR017W MTR4P47047 1073 aaKnown RBP14.92□□□□□ -0.02
TIM23YNR017W YML133CQ03099 1374 aa14.92□□□□□ -0.02
TIM23YNR017W YLL067CQ07888 1374 aa14.92□□□□□ -0.02
TIM23YNR017W YLL066CQ99208 1374 aa14.92□□□□□ -0.02
TIM23YNR017W MHP1P43638 1398 aa14.91□□□□□ -0.02
TIM23YNR017W PRP5P21372 849 aaPredicted RBP14.89□□□□□ -0.03
TIM23YNR017W PRP43P53131 767 aaKnown RBP14.89□□□□□ -0.03
TIM23YNR017W ENV9Q08651 330 aa14.89□□□□□ -0.03
TIM23YNR017W PRI1P10363 409 aa14.87□□□□□ -0.03
TIM23YNR017W FKH1P40466 484 aa14.87□□□□□ -0.03
TIM23YNR017W YIL177CP40434 1758 aa14.87□□□□□ -0.03
TIM23YNR017W YJL225CP40889 1758 aa14.87□□□□□ -0.03
TIM23YNR017W CSE4P36012 229 aa14.86□□□□□ -0.03
TIM23YNR017W RPS24AP0CX31 135 aaKnown RBP14.83□□□□□ -0.04
TIM23YNR017W RPS24BP0CX32 135 aaKnown RBP14.83□□□□□ -0.04
TIM23YNR017W IMH1Q06704 911 aaKnown RBP14.83□□□□□ -0.04
TIM23YNR017W RTG3P38165 486 aa14.82□□□□□ -0.04
TIM23YNR017W MSB3P48566 633 aaPredicted RBP14.81□□□□□ -0.04
TIM23YNR017W PDS5Q04264 1277 aa14.81□□□□□ -0.04
TIM23YNR017W URB1P34241 1764 aaKnown RBP14.8□□□□□ -0.04
TIM23YNR017W YMR074CQ04773 145 aa14.79□□□□□ -0.04
TIM23YNR017W FKS3Q04952 1785 aa14.79□□□□□ -0.04
TIM23YNR017W SLM3Q12093 417 aa14.76□□□□□ -0.05
TIM23YNR017W PDI1P17967 522 aaKnown RBP14.75□□□□□ -0.05
TIM23YNR017W YRF1-3P0CX14 1859 aa14.75□□□□□ -0.05
TIM23YNR017W YRF1-7P0CX15 1859 aa14.75□□□□□ -0.05
TIM23YNR017W YRF1-6P53819 1859 aa14.75□□□□□ -0.05
TIM23YNR017W TCB1Q12466 1186 aa14.74□□□□□ -0.05
TIM23YNR017W APC1P53886 1748 aa14.73□□□□□ -0.05
TIM23YNR017W RTF1P53064 558 aa14.73□□□□□ -0.05
TIM23YNR017W RSF2P46974 1380 aa14.72□□□□□ -0.05
TIM23YNR017W TAP42Q04372 366 aa14.69□□□□□ -0.06
TIM23YNR017W GAS4Q08271 471 aa14.68□□□□□ -0.06
TIM23YNR017W DPS1P04802 557 aaKnown RBP14.67□□□□□ -0.06
TIM23YNR017W IES2P40154 320 aa14.67□□□□□ -0.06
TIM23YNR017W AUS1Q08409 1394 aa14.66□□□□□ -0.06
TIM23YNR017W GRX4P32642 244 aa14.65□□□□□ -0.06
TIM23YNR017W LEU3P08638 886 aa14.63□□□□□ -0.07
TIM23YNR017W XKS1P42826 600 aa14.63□□□□□ -0.07
TIM23YNR017W ROM2P51862 1356 aaKnown RBP14.61□□□□□ -0.07
TIM23YNR017W SEC3P33332 1336 aaKnown RBP14.61□□□□□ -0.07
TIM23YNR017W ENP1P38333 483 aaKnown RBP14.6□□□□□ -0.07
TIM23YNR017W HIM1Q06674 414 aa14.6□□□□□ -0.07
TIM23YNR017W SNF2P22082 1703 aa14.58□□□□□ -0.07
TIM23YNR017W KAR2P16474 682 aaKnown RBP14.57□□□□□ -0.08
TIM23YNR017W YEF3P16521 1044 aaKnown RBP14.57□□□□□ -0.08
TIM23YNR017W DOT5P40553 215 aa14.57□□□□□ -0.08
TIM23YNR017W NST1P53935 1240 aa14.57□□□□□ -0.08
TIM23YNR017W BUD31P25337 157 aaPredicted RBP14.56□□□□□ -0.08
TIM23YNR017W PSD2P53037 1138 aaKnown RBP14.55□□□□□ -0.08
TIM23YNR017W SIR4P11978 1358 aa14.53□□□□□ -0.08
TIM23YNR017W YKL133CP36066 463 aa14.53□□□□□ -0.08
TIM23YNR017W RPO41P13433 1351 aaKnown RBP14.52□□□□□ -0.08
TIM23YNR017W FOX2Q02207 900 aaKnown RBP14.52□□□□□ -0.09
TIM23YNR017W TRK1P12685 1235 aa14.51□□□□□ -0.09
TIM23YNR017W RCR1P38212 213 aa14.5□□□□□ -0.09
TIM23YNR017W EDE1P34216 1381 aa14.49□□□□□ -0.09
TIM23YNR017W RPN11P43588 306 aaKnown RBP14.48□□□□□ -0.09
TIM23YNR017W UBP1P25037 809 aa14.47□□□□□ -0.09
TIM23YNR017W MEC3Q02574 474 aa14.47□□□□□ -0.09
TIM23YNR017W SPT7P35177 1332 aa14.46□□□□□ -0.09
TIM23YNR017W RIM15P43565 1770 aa14.46□□□□□ -0.09
TIM23YNR017W PAP2P53632 584 aaKnown RBP14.45□□□□□ -0.1
TIM23YNR017W YRF1-4O13559 1382 aa14.45□□□□□ -0.1
TIM23YNR017W BUB1P41695 1021 aaKnown RBP RIP-Chip data14.44□□□□□ -0.1not detected
TIM23YNR017W COBP00163 385 aa14.43□□□□□ -0.1
TIM23YNR017W LAM6Q08001 693 aa14.43□□□□□ -0.1
TIM23YNR017W YJL181WP46987 611 aa14.41□□□□□ -0.1
TIM23YNR017W ADE16P54113 591 aaKnown RBP14.41□□□□□ -0.1
TIM23YNR017W FRK1Q03002 865 aaPredicted RBP14.41□□□□□ -0.1
TIM23YNR017W PRP40P33203 583 aaKnown RBP14.4□□□□□ -0.1
TIM23YNR017W YKR075CP36155 307 aa14.4□□□□□ -0.1
TIM23YNR017W DSD1P53095 428 aa14.39□□□□□ -0.11
TIM23YNR017W NPR2P39923 615 aa14.38□□□□□ -0.11
TIM23YNR017W AKL1P38080 1108 aaKnown RBP14.37□□□□□ -0.11
TIM23YNR017W INP54Q08227 384 aaKnown RBP14.36□□□□□ -0.11
TIM23YNR017W HSP104P31539 908 aaKnown RBP14.35□□□□□ -0.11
TIM23YNR017W RRP46P53256 223 aaPredicted RBP14.35□□□□□ -0.11
TIM23YNR017W CTF4Q01454 927 aa14.35□□□□□ -0.11
TIM23YNR017W IOC4Q04213 475 aa14.35□□□□□ -0.11
TIM23YNR017W ATG13Q06628 738 aa14.34□□□□□ -0.11
TIM23YNR017W OSM1P21375 501 aaKnown RBP14.3□□□□□ -0.12
TIM23YNR017W NUP145P49687 1317 aa14.3□□□□□ -0.12
TIM23YNR017W LYS4P49367 693 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms