RNA–Protein interactions for RNA: YNL339C

YRF1-6, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-6, Length 5,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-6YNL339C TYS1P36421 394 aaKnown RBP9.37□□□□□ -0.91
YRF1-6YNL339C ITC1P53125 1264 aa9.37□□□□□ -0.91
YRF1-6YNL339C ATG2P53855 1592 aa9.37□□□□□ -0.91
YRF1-6YNL339C UBP1P25037 809 aa9.37□□□□□ -0.91
YRF1-6YNL339C ETT1Q08421 412 aaKnown RBP9.37□□□□□ -0.91
YRF1-6YNL339C MIC60P36112 540 aa9.36□□□□□ -0.91
YRF1-6YNL339C RIX1P38883 763 aaPredicted RBP9.36□□□□□ -0.91
YRF1-6YNL339C MAM1P40065 302 aa9.35□□□□□ -0.91
YRF1-6YNL339C ISW2Q08773 1120 aa9.35□□□□□ -0.91
YRF1-6YNL339C NBL1Q3E7Y6 73 aa9.35□□□□□ -0.91
YRF1-6YNL339C NAB3P38996 802 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
YRF1-6YNL339C LTE1P07866 1435 aa9.35□□□□□ -0.91
YRF1-6YNL339C YBP2P53169 641 aa9.35□□□□□ -0.91
YRF1-6YNL339C MIF2P35201 549 aa9.34□□□□□ -0.91
YRF1-6YNL339C TCB1Q12466 1186 aa9.34□□□□□ -0.91
YRF1-6YNL339C STM1P39015 273 aaKnown RBP9.34□□□□□ -0.91
YRF1-6YNL339C TOP1P04786 769 aa9.33□□□□□ -0.92
YRF1-6YNL339C SAP155P43612 1002 aa9.33□□□□□ -0.92
YRF1-6YNL339C MFT1P33441 392 aaKnown RBP9.33□□□□□ -0.92
YRF1-6YNL339C RLF2Q12495 606 aa9.33□□□□□ -0.92
YRF1-6YNL339C RMD1Q03441 430 aa9.32□□□□□ -0.92
YRF1-6YNL339C KRE5P22023 1365 aa9.32□□□□□ -0.92
YRF1-6YNL339C HPC2Q01448 625 aa9.32□□□□□ -0.92
YRF1-6YNL339C PRS1P32895 427 aaKnown RBP9.31□□□□□ -0.92
YRF1-6YNL339C PBY1P38254 753 aa9.31□□□□□ -0.92
YRF1-6YNL339C PDR18P53756 1333 aa9.31□□□□□ -0.92
YRF1-6YNL339C CDC25P04821 1589 aa9.3□□□□□ -0.92
YRF1-6YNL339C RAD9P14737 1309 aa9.3□□□□□ -0.92
YRF1-6YNL339C RAD50P12753 1312 aa9.3□□□□□ -0.92
YRF1-6YNL339C RAV1P47104 1357 aa9.3□□□□□ -0.92
YRF1-6YNL339C BUD3P25558 1636 aa9.3□□□□□ -0.92
YRF1-6YNL339C BIK1P11709 440 aa9.3□□□□□ -0.92
YRF1-6YNL339C KCC4P25389 1037 aa9.29□□□□□ -0.92
YRF1-6YNL339C AKL1P38080 1108 aaKnown RBP9.29□□□□□ -0.92
YRF1-6YNL339C YNR029CP53729 429 aaKnown RBP9.29□□□□□ -0.92
YRF1-6YNL339C MET5P47169 1442 aa9.29□□□□□ -0.92
YRF1-6YNL339C NOP53Q12080 455 aaKnown RBP9.28□□□□□ -0.92
YRF1-6YNL339C HSP82P02829 709 aaKnown RBP9.28□□□□□ -0.92
YRF1-6YNL339C NUP133P36161 1157 aa9.28□□□□□ -0.92
YRF1-6YNL339C PRP5P21372 849 aaPredicted RBP9.28□□□□□ -0.92
YRF1-6YNL339C RNR2P09938 399 aaKnown RBP9.28□□□□□ -0.92
YRF1-6YNL339C NUP170P38181 1502 aa9.27□□□□□ -0.93
YRF1-6YNL339C SLN1P39928 1220 aaPredicted RBP9.27□□□□□ -0.93
YRF1-6YNL339C RSM25P40496 264 aa9.27□□□□□ -0.93
YRF1-6YNL339C HUL5P53119 910 aa9.26□□□□□ -0.93
YRF1-6YNL339C DNF1P32660 1571 aa9.26□□□□□ -0.93
YRF1-6YNL339C BMS1Q08965 1183 aaKnown RBP9.26□□□□□ -0.93
YRF1-6YNL339C TIF4632P39936 914 aaKnown RBP9.26□□□□□ -0.93
YRF1-6YNL339C SPO1P53541 631 aa9.26□□□□□ -0.93
YRF1-6YNL339C MDG1P53885 366 aa9.26□□□□□ -0.93
YRF1-6YNL339C MLP2P40457 1679 aa9.26□□□□□ -0.93
YRF1-6YNL339C DJP1P40564 432 aa9.26□□□□□ -0.93
YRF1-6YNL339C RMT2Q03305 412 aa9.26□□□□□ -0.93
YRF1-6YNL339C TRM3Q07527 1436 aa9.26□□□□□ -0.93
YRF1-6YNL339C UGA3P26370 528 aa9.25□□□□□ -0.93
YRF1-6YNL339C SER1P33330 395 aaKnown RBP9.25□□□□□ -0.93
YRF1-6YNL339C FKH1P40466 484 aa9.25□□□□□ -0.93
YRF1-6YNL339C IRC3Q06683 689 aa9.24□□□□□ -0.93
YRF1-6YNL339C MRD1Q06106 887 aaKnown RBP9.24□□□□□ -0.93
YRF1-6YNL339C SUI2P20459 304 aaKnown RBP9.24□□□□□ -0.93
YRF1-6YNL339C SAC6P32599 642 aaKnown RBP9.24□□□□□ -0.93
YRF1-6YNL339C XKS1P42826 600 aa9.24□□□□□ -0.93
YRF1-6YNL339C ENT3P47160 408 aa9.23□□□□□ -0.93
YRF1-6YNL339C MRP7P12687 371 aa9.23□□□□□ -0.93
YRF1-6YNL339C ARL1P38116 183 aaKnown RBP9.23□□□□□ -0.93
YRF1-6YNL339C BUD6P41697 788 aa9.23□□□□□ -0.93
YRF1-6YNL339C TRP5P00931 707 aaKnown RBP9.22□□□□□ -0.93
YRF1-6YNL339C MGA2P40578 1113 aa9.22□□□□□ -0.93
YRF1-6YNL339C HIM1Q06674 414 aa9.22□□□□□ -0.93
YRF1-6YNL339C PRD1P25375 712 aa9.22□□□□□ -0.93
YRF1-6YNL339C CBF5P33322 483 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
YRF1-6YNL339C PSK1P31374 1356 aa9.21□□□□□ -0.93
YRF1-6YNL339C DEF1P35732 738 aaKnown RBP9.21□□□□□ -0.93
YRF1-6YNL339C TTI1P36097 1038 aa9.21□□□□□ -0.94
YRF1-6YNL339C SSF1P38789 453 aaPredicted RBP9.2□□□□□ -0.94
YRF1-6YNL339C PWP2P25635 923 aaKnown RBP9.2□□□□□ -0.94
YRF1-6YNL339C CTF4Q01454 927 aa9.2□□□□□ -0.94
YRF1-6YNL339C TAP42Q04372 366 aa9.2□□□□□ -0.94
YRF1-6YNL339C ULS1Q08562 1619 aa9.19□□□□□ -0.94
YRF1-6YNL339C YPP1P46951 817 aa9.19□□□□□ -0.94
YRF1-6YNL339C TRK1P12685 1235 aa9.19□□□□□ -0.94
YRF1-6YNL339C ESC1Q03661 1658 aaKnown RBP9.19□□□□□ -0.94
YRF1-6YNL339C HSC82P15108 705 aaKnown RBP9.18□□□□□ -0.94
YRF1-6YNL339C YKL133CP36066 463 aa9.18□□□□□ -0.94
YRF1-6YNL339C SMC3P47037 1230 aa9.18□□□□□ -0.94
YRF1-6YNL339C RAD4P14736 754 aa9.18□□□□□ -0.94
YRF1-6YNL339C TPM2P40414 161 aa9.18□□□□□ -0.94
YRF1-6YNL339C PIL1P53252 339 aaKnown RBP9.18□□□□□ -0.94
YRF1-6YNL339C DSD1P53095 428 aa9.17□□□□□ -0.94
YRF1-6YNL339C MLC1P53141 149 aa9.17□□□□□ -0.94
YRF1-6YNL339C SGD1Q06132 899 aa9.17□□□□□ -0.94
YRF1-6YNL339C SRC1Q03707 834 aa9.17□□□□□ -0.94
YRF1-6YNL339C SSP2Q08646 371 aa9.17□□□□□ -0.94
YRF1-6YNL339C OSW7P43611 510 aa9.16□□□□□ -0.94
YRF1-6YNL339C BRE1Q07457 700 aaKnown RBP9.16□□□□□ -0.94
YRF1-6YNL339C SNT2P53127 1403 aa9.16□□□□□ -0.94
YRF1-6YNL339C SRS2P12954 1174 aa9.16□□□□□ -0.94
YRF1-6YNL339C THI12P42883 340 aa9.16□□□□□ -0.94
YRF1-6YNL339C THI5P43534 340 aa9.16□□□□□ -0.94
YRF1-6YNL339C THI11P47183 340 aa9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms