RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	SSA2	P10592	639 aa	Known RBP	4.8	□□□□□ -1.64
SKP2	YNL311C	GCN2	P15442	1659 aa		4.79	□□□□□ -1.64
SKP2	YNL311C	RPL17A	P05740	184 aa	Known RBP	4.78	□□□□□ -1.64
SKP2	YNL311C	RPL17B	P46990	184 aa	Known RBP	4.78	□□□□□ -1.64
SKP2	YNL311C	BFR2	Q06631	534 aa	Known RBP	4.78	□□□□□ -1.64
SKP2	YNL311C	RRP5	Q05022	1729 aa	Known RBP	4.78	□□□□□ -1.64
SKP2	YNL311C	MRX12	P47084	519 aa		4.77	□□□□□ -1.65
SKP2	YNL311C	LEU3	P08638	886 aa		4.76	□□□□□ -1.65
SKP2	YNL311C	KRE5	P22023	1365 aa		4.76	□□□□□ -1.65
SKP2	YNL311C	RIA1	P53893	1110 aa		4.76	□□□□□ -1.65
SKP2	YNL311C	RPN11	P43588	306 aa	Known RBP	4.75	□□□□□ -1.65
SKP2	YNL311C	PEX21	P50091	288 aa		4.72	□□□□□ -1.65
SKP2	YNL311C	BUD21	Q08492	214 aa	Predicted RBP	4.72	□□□□□ -1.65
SKP2	YNL311C	SAS10	Q12136	610 aa	Predicted RBP	4.72	□□□□□ -1.65
SKP2	YNL311C	ROM2	P51862	1356 aa	Known RBP	4.72	□□□□□ -1.65
SKP2	YNL311C	YJL181W	P46987	611 aa		4.71	□□□□□ -1.65
SKP2	YNL311C	PUS5	Q06244	254 aa		4.7	□□□□□ -1.66
SKP2	YNL311C	RSF2	P46974	1380 aa		4.7	□□□□□ -1.66
SKP2	YNL311C	NPR2	P39923	615 aa		4.7	□□□□□ -1.66
SKP2	YNL311C	NUP192	P47054	1683 aa		4.69	□□□□□ -1.66
SKP2	YNL311C	SSA4	P22202	642 aa	Known RBP	4.69	□□□□□ -1.66
SKP2	YNL311C	LYS4	P49367	693 aa	Predicted RBP	4.69	□□□□□ -1.66
SKP2	YNL311C	YEF3	P16521	1044 aa	Known RBP	4.69	□□□□□ -1.66
SKP2	YNL311C	CTH1	P47976	325 aa		4.69	□□□□□ -1.66
SKP2	YNL311C	URB1	P34241	1764 aa	Known RBP	4.68	□□□□□ -1.66
SKP2	YNL311C	SPT7	P35177	1332 aa		4.68	□□□□□ -1.66
SKP2	YNL311C	PRP40	P33203	583 aa	Known RBP	4.68	□□□□□ -1.66
SKP2	YNL311C	DOT5	P40553	215 aa		4.68	□□□□□ -1.66
SKP2	YNL311C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.67	□□□□□ -1.66
SKP2	YNL311C	PSK1	P31374	1356 aa		4.67	□□□□□ -1.66
SKP2	YNL311C	RAD9	P14737	1309 aa		4.66	□□□□□ -1.66
SKP2	YNL311C	PRP45	P28004	379 aa	Predicted RBP	4.66	□□□□□ -1.66
SKP2	YNL311C	LAM6	Q08001	693 aa		4.66	□□□□□ -1.66
SKP2	YNL311C	YGL015C	P33199	130 aa		4.65	□□□□□ -1.66
SKP2	YNL311C	YKR023W	P36119	530 aa	Known RBP	4.64	□□□□□ -1.67
SKP2	YNL311C	FOX2	Q02207	900 aa	Known RBP	4.64	□□□□□ -1.67
SKP2	YNL311C	SNF2	P22082	1703 aa		4.64	□□□□□ -1.67
SKP2	YNL311C	POM152	P39685	1337 aa		4.63	□□□□□ -1.67
SKP2	YNL311C	BDF1	P35817	686 aa		4.63	□□□□□ -1.67
SKP2	YNL311C	IES2	P40154	320 aa		4.63	□□□□□ -1.67
SKP2	YNL311C	ALD3	P54114	506 aa		4.63	□□□□□ -1.67
SKP2	YNL311C	MAC1	P35192	417 aa		4.62	□□□□□ -1.67
SKP2	YNL311C	DUS1	P53759	423 aa	Known RBP	4.62	□□□□□ -1.67
SKP2	YNL311C	SDH2	P21801	266 aa		4.61	□□□□□ -1.67
SKP2	YNL311C	TAF5	P38129	798 aa		4.61	□□□□□ -1.67
SKP2	YNL311C	FKS3	Q04952	1785 aa		4.61	□□□□□ -1.67
SKP2	YNL311C	PRP5	P21372	849 aa	Predicted RBP	4.6	□□□□□ -1.67
SKP2	YNL311C	SAP155	P43612	1002 aa		4.58	□□□□□ -1.68
SKP2	YNL311C	CTT1	P06115	562 aa		4.57	□□□□□ -1.68
SKP2	YNL311C	ETP1	P38748	585 aa	Known RBP	4.56	□□□□□ -1.68
SKP2	YNL311C	YER156C	P40093	338 aa	Known RBP	4.56	□□□□□ -1.68
SKP2	YNL311C	EAF6	P47128	113 aa		4.56	□□□□□ -1.68
SKP2	YNL311C	MHP1	P43638	1398 aa		4.55	□□□□□ -1.68
SKP2	YNL311C	YKR075C	P36155	307 aa		4.55	□□□□□ -1.68
SKP2	YNL311C	TCB1	Q12466	1186 aa		4.55	□□□□□ -1.68
SKP2	YNL311C	SQS1	P53866	767 aa	Known RBP	4.55	□□□□□ -1.68
SKP2	YNL311C	CAB1	Q04430	367 aa		4.55	□□□□□ -1.68
SKP2	YNL311C	ALD4	P46367	519 aa	Known RBP	4.54	□□□□□ -1.68
SKP2	YNL311C	FPK1	P53739	893 aa		4.54	□□□□□ -1.68
SKP2	YNL311C	TY4B-H	P0C2J7	1802 aa		4.54	□□□□□ -1.68
SKP2	YNL311C	TY4B-J	P47024	1803 aa		4.54	□□□□□ -1.68
SKP2	YNL311C	MSB3	P48566	633 aa	Predicted RBP	4.53	□□□□□ -1.68
SKP2	YNL311C	CPS1	P27614	576 aa		4.53	□□□□□ -1.68
SKP2	YNL311C	COB	P00163	385 aa		4.52	□□□□□ -1.69
SKP2	YNL311C	RPS9B	P05755	195 aa	Known RBP	4.52	□□□□□ -1.69
SKP2	YNL311C	NAP1	P25293	417 aa	Known RBP	4.52	□□□□□ -1.69
SKP2	YNL311C	SPT21	P35209	758 aa		4.52	□□□□□ -1.69
SKP2	YNL311C	CDC27	P38042	758 aa		4.52	□□□□□ -1.69
SKP2	YNL311C	MSN5	P52918	1224 aa		4.52	□□□□□ -1.69
SKP2	YNL311C	YKL222C	P35995	705 aa		4.51	□□□□□ -1.69
SKP2	YNL311C	YKL133C	P36066	463 aa		4.51	□□□□□ -1.69
SKP2	YNL311C	SRF1	Q12516	437 aa		4.51	□□□□□ -1.69
SKP2	YNL311C	YLL066C	Q99208	1374 aa		4.51	□□□□□ -1.69
SKP2	YNL311C	ADE6	P38972	1358 aa	Known RBP	4.51	□□□□□ -1.69
SKP2	YNL311C	RAV1	P47104	1357 aa		4.51	□□□□□ -1.69
SKP2	YNL311C	UTP22	P53254	1237 aa	Predicted RBP	4.5	□□□□□ -1.69
SKP2	YNL311C	BUG1	Q12191	341 aa		4.5	□□□□□ -1.69
SKP2	YNL311C	YRF1-3	P0CX14	1859 aa		4.5	□□□□□ -1.69
SKP2	YNL311C	YRF1-7	P0CX15	1859 aa		4.5	□□□□□ -1.69
SKP2	YNL311C	YRF1-6	P53819	1859 aa		4.5	□□□□□ -1.69
SKP2	YNL311C	TOS1	P38288	455 aa		4.49	□□□□□ -1.69
SKP2	YNL311C	ENP1	P38333	483 aa	Known RBP	4.49	□□□□□ -1.69
SKP2	YNL311C	YRF1-4	O13559	1382 aa		4.48	□□□□□ -1.69
SKP2	YNL311C	YLR419W	Q06698	1435 aa	Known RBP	4.48	□□□□□ -1.69
SKP2	YNL311C	ERT1	P38140	529 aa		4.48	□□□□□ -1.69
SKP2	YNL311C	RRT14	P40470	206 aa		4.48	□□□□□ -1.69
SKP2	YNL311C	SLM3	Q12093	417 aa		4.48	□□□□□ -1.69
SKP2	YNL311C	MSB4	Q12317	492 aa		4.48	□□□□□ -1.69
SKP2	YNL311C	KIN4	Q01919	800 aa		4.46	□□□□□ -1.7
SKP2	YNL311C	PIB1	Q06651	286 aa		4.46	□□□□□ -1.7
SKP2	YNL311C	NYV1	Q12255	253 aa		4.46	□□□□□ -1.7
SKP2	YNL311C	YLR278C	Q05854	1341 aa		4.45	□□□□□ -1.7
SKP2	YNL311C	APC1	P53886	1748 aa		4.45	□□□□□ -1.7
SKP2	YNL311C	RAD4	P14736	754 aa		4.44	□□□□□ -1.7
SKP2	YNL311C	CHZ1	P40019	153 aa	Predicted RBP	4.44	□□□□□ -1.7
SKP2	YNL311C	UBP10	P53874	792 aa	Predicted RBP	4.44	□□□□□ -1.7
SKP2	YNL311C	TIF6	Q12522	245 aa	Known RBP	4.44	□□□□□ -1.7
SKP2	YNL311C	MEC3	Q02574	474 aa		4.44	□□□□□ -1.7
SKP2	YNL311C	SLI15	P38283	698 aa		4.43	□□□□□ -1.7
SKP2	YNL311C	HPC2	Q01448	625 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms