RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeastyeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATM1YMR301C ENT1Q12518 454 aa6.73□□□□□ -1.33
ATM1YMR301C TY4B-HP0C2J7 1802 aa6.72□□□□□ -1.33
ATM1YMR301C TY4B-JP47024 1803 aa6.72□□□□□ -1.33
ATM1YMR301C PRY3P47033 881 aa6.72□□□□□ -1.33
ATM1YMR301C ENV9Q08651 330 aa6.71□□□□□ -1.34
ATM1YMR301C YMR074CQ04773 145 aa6.7□□□□□ -1.34
ATM1YMR301C RPL17AP05740 184 aaKnown RBP6.69□□□□□ -1.34
ATM1YMR301C RPL17BP46990 184 aaKnown RBP6.69□□□□□ -1.34
ATM1YMR301C PRI1P10363 409 aa6.69□□□□□ -1.34
ATM1YMR301C IMH1Q06704 911 aaKnown RBP6.68□□□□□ -1.34
ATM1YMR301C NOP7P53261 605 aaKnown RBP6.67□□□□□ -1.34
ATM1YMR301C AAD16Q02895 342 aa6.65□□□□□ -1.35
ATM1YMR301C TAF8Q03750 510 aa6.65□□□□□ -1.35
ATM1YMR301C CPS1P27614 576 aa6.64□□□□□ -1.35
ATM1YMR301C PRP45P28004 379 aaPredicted RBP6.64□□□□□ -1.35
ATM1YMR301C RCM1P53972 490 aa6.64□□□□□ -1.35
ATM1YMR301C URB1P34241 1764 aaKnown RBP6.64□□□□□ -1.35
ATM1YMR301C TAF5P38129 798 aa6.64□□□□□ -1.35
ATM1YMR301C RPG1P38249 964 aaKnown RBP6.64□□□□□ -1.35
ATM1YMR301C NAP1P25293 417 aaKnown RBP6.62□□□□□ -1.35
ATM1YMR301C BUD31P25337 157 aaPredicted RBP6.62□□□□□ -1.35
ATM1YMR301C FKS3Q04952 1785 aa6.62□□□□□ -1.35
ATM1YMR301C PPH3P32345 308 aa6.62□□□□□ -1.35
ATM1YMR301C ESL2P36168 1195 aa6.61□□□□□ -1.35
ATM1YMR301C PRP5P21372 849 aaPredicted RBP6.59□□□□□ -1.35
ATM1YMR301C SSP1P38871 571 aa6.57□□□□□ -1.36
ATM1YMR301C ADE6P38972 1358 aaKnown RBP6.56□□□□□ -1.36
ATM1YMR301C YIL177CP40434 1758 aa6.56□□□□□ -1.36
ATM1YMR301C YJL225CP40889 1758 aa6.56□□□□□ -1.36
ATM1YMR301C YRF1-3P0CX14 1859 aa6.56□□□□□ -1.36
ATM1YMR301C YRF1-7P0CX15 1859 aa6.56□□□□□ -1.36
ATM1YMR301C YRF1-6P53819 1859 aa6.56□□□□□ -1.36
ATM1YMR301C LEU3P08638 886 aa6.56□□□□□ -1.36
ATM1YMR301C MSB3P48566 633 aaPredicted RBP6.56□□□□□ -1.36
ATM1YMR301C PSK1P31374 1356 aa6.55□□□□□ -1.36
ATM1YMR301C DOT5P40553 215 aa6.54□□□□□ -1.36
ATM1YMR301C RPN11P43588 306 aaKnown RBP6.54□□□□□ -1.36
ATM1YMR301C SPE2P21182 396 aa6.53□□□□□ -1.36
ATM1YMR301C UBP1P25037 809 aa6.53□□□□□ -1.36
ATM1YMR301C RIM101P33400 625 aa6.53□□□□□ -1.36
ATM1YMR301C IES2P40154 320 aa6.53□□□□□ -1.36
ATM1YMR301C KIP3P53086 805 aaKnown RBP6.51□□□□□ -1.37
ATM1YMR301C FOX2Q02207 900 aaKnown RBP6.51□□□□□ -1.37
ATM1YMR301C RSF2P46974 1380 aa6.51□□□□□ -1.37
ATM1YMR301C TCB1Q12466 1186 aa6.5□□□□□ -1.37
ATM1YMR301C APC1P53886 1748 aa6.5□□□□□ -1.37
ATM1YMR301C YBL086CP38177 466 aa6.49□□□□□ -1.37
ATM1YMR301C ROM2P51862 1356 aaKnown RBP6.49□□□□□ -1.37
ATM1YMR301C CSE4P36012 229 aa6.49□□□□□ -1.37
ATM1YMR301C SLM3Q12093 417 aa6.49□□□□□ -1.37
ATM1YMR301C RPS24AP0CX31 135 aaKnown RBP6.48□□□□□ -1.37
ATM1YMR301C RPS24BP0CX32 135 aaKnown RBP6.48□□□□□ -1.37
ATM1YMR301C NPR2P39923 615 aa6.48□□□□□ -1.37
ATM1YMR301C LYS4P49367 693 aaPredicted RBP6.48□□□□□ -1.37
ATM1YMR301C YLR419WQ06698 1435 aaKnown RBP6.47□□□□□ -1.37
ATM1YMR301C PRP43P53131 767 aaKnown RBP6.47□□□□□ -1.37
ATM1YMR301C ORC1P54784 914 aaPredicted RBP6.47□□□□□ -1.37
ATM1YMR301C LEU2P04173 364 aaPredicted RBP6.46□□□□□ -1.37
ATM1YMR301C CHZ1P40019 153 aaPredicted RBP6.46□□□□□ -1.37
ATM1YMR301C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
ATM1YMR301C EDE1P34216 1381 aa6.46□□□□□ -1.38
ATM1YMR301C YCK3P39962 524 aa6.45□□□□□ -1.38
ATM1YMR301C MTR4P47047 1073 aaKnown RBP6.45□□□□□ -1.38
ATM1YMR301C XKS1P42826 600 aa6.45□□□□□ -1.38
ATM1YMR301C YJL181WP46987 611 aa6.45□□□□□ -1.38
ATM1YMR301C YML133CQ03099 1374 aa6.44□□□□□ -1.38
ATM1YMR301C YLL067CQ07888 1374 aa6.44□□□□□ -1.38
ATM1YMR301C YLL066CQ99208 1374 aa6.44□□□□□ -1.38
ATM1YMR301C SNF2P22082 1703 aa6.44□□□□□ -1.38
ATM1YMR301C SPT21P35209 758 aa6.44□□□□□ -1.38
ATM1YMR301C COBP00163 385 aa6.43□□□□□ -1.38
ATM1YMR301C YKL133CP36066 463 aa6.43□□□□□ -1.38
ATM1YMR301C SSA2P10592 639 aaKnown RBP6.43□□□□□ -1.38
ATM1YMR301C UGA2P38067 497 aa6.43□□□□□ -1.38
ATM1YMR301C CTH1P47976 325 aa6.43□□□□□ -1.38
ATM1YMR301C YRF1-4O13559 1382 aa6.43□□□□□ -1.38
ATM1YMR301C RIM15P43565 1770 aa6.43□□□□□ -1.38
ATM1YMR301C YEF3P16521 1044 aaKnown RBP6.42□□□□□ -1.38
ATM1YMR301C YKR075CP36155 307 aa6.42□□□□□ -1.38
ATM1YMR301C ENP1P38333 483 aaKnown RBP6.42□□□□□ -1.38
ATM1YMR301C GTT3P39996 337 aa6.42□□□□□ -1.38
ATM1YMR301C LAM6Q08001 693 aa6.42□□□□□ -1.38
ATM1YMR301C PRP40P33203 583 aaKnown RBP6.41□□□□□ -1.38
ATM1YMR301C MLP1Q02455 1875 aaKnown RBP6.41□□□□□ -1.38
ATM1YMR301C ALD2P47771 506 aa6.41□□□□□ -1.38
ATM1YMR301C GAS4Q08271 471 aa6.38□□□□□ -1.39
ATM1YMR301C DPS1P04802 557 aaKnown RBP6.37□□□□□ -1.39
ATM1YMR301C FRK1Q03002 865 aaPredicted RBP6.37□□□□□ -1.39
ATM1YMR301C SSA1P10591 642 aaKnown RBP6.37□□□□□ -1.39
ATM1YMR301C RCR1P38212 213 aa6.36□□□□□ -1.39
ATM1YMR301C ADE16P54113 591 aaKnown RBP6.35□□□□□ -1.39
ATM1YMR301C SIR4P11978 1358 aa6.35□□□□□ -1.39
ATM1YMR301C FKH1P40466 484 aa6.34□□□□□ -1.39
ATM1YMR301C MEC3Q02574 474 aa6.33□□□□□ -1.4
ATM1YMR301C HAA1Q12753 694 aaKnown RBP6.33□□□□□ -1.4
ATM1YMR301C AUS1Q08409 1394 aa6.32□□□□□ -1.4
ATM1YMR301C PDI1P17967 522 aaKnown RBP6.32□□□□□ -1.4
ATM1YMR301C RTG3P38165 486 aa6.32□□□□□ -1.4
ATM1YMR301C RPO41P13433 1351 aaKnown RBP6.32□□□□□ -1.4
ATM1YMR301C OXP1P28273 1286 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms