RNA–Protein interactions for RNA: YMR228W

MTF1, Transcript of Mitochondrial RNA polymerase specificity factor, yeastyeast

Gene MTF1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MTF1YMR228W TEA1P47988 759 aa8.33□□□□□ -1.08
MTF1YMR228W YML082WQ04533 649 aaKnown RBP8.33□□□□□ -1.08
MTF1YMR228W NPL4P33755 580 aa8.31□□□□□ -1.08
MTF1YMR228W TFB3Q03290 321 aa8.31□□□□□ -1.08
MTF1YMR228W NUD1P32336 851 aa8.3□□□□□ -1.08
MTF1YMR228W SSA1P10591 642 aaKnown RBP8.28□□□□□ -1.08
MTF1YMR228W SSA2P10592 639 aaKnown RBP8.27□□□□□ -1.09
MTF1YMR228W RAM1P22007 431 aa8.27□□□□□ -1.09
MTF1YMR228W YML020WQ03722 664 aa8.27□□□□□ -1.09
MTF1YMR228W YPR015CQ12531 247 aa8.26□□□□□ -1.09
MTF1YMR228W GEF1P37020 779 aa8.25□□□□□ -1.09
MTF1YMR228W GYP1Q08484 637 aa8.24□□□□□ -1.09
MTF1YMR228W AIM44Q99299 758 aa8.24□□□□□ -1.09
MTF1YMR228W ISM1P48526 1002 aa8.23□□□□□ -1.09
MTF1YMR228W GCD11P32481 527 aaKnown RBP8.22□□□□□ -1.09
MTF1YMR228W STR2P47164 639 aa8.22□□□□□ -1.09
MTF1YMR228W YMR196WQ04336 1088 aa8.22□□□□□ -1.09
MTF1YMR228W SLX8P40072 274 aa8.21□□□□□ -1.1
MTF1YMR228W NOP8Q08287 484 aaPredicted RBP8.21□□□□□ -1.1
MTF1YMR228W SGS1P35187 1447 aa8.2□□□□□ -1.1
MTF1YMR228W XDJ1P39102 459 aa8.2□□□□□ -1.1
MTF1YMR228W NIS1P53939 407 aa8.2□□□□□ -1.1
MTF1YMR228W SUB2Q07478 446 aaKnown RBP8.2□□□□□ -1.1
MTF1YMR228W BUD20Q08004 166 aaPredicted RBP8.2□□□□□ -1.1
MTF1YMR228W PRT1P06103 763 aaKnown RBP8.18□□□□□ -1.1
MTF1YMR228W KEX2P13134 814 aa8.18□□□□□ -1.1
MTF1YMR228W CSN12P47130 423 aa8.18□□□□□ -1.1
MTF1YMR228W PKC1P24583 1151 aa8.17□□□□□ -1.1
MTF1YMR228W SSA4P22202 642 aaKnown RBP8.15□□□□□ -1.1
MTF1YMR228W BIM1P40013 344 aa8.15□□□□□ -1.1
MTF1YMR228W YJL007CP47080 104 aa8.15□□□□□ -1.1
MTF1YMR228W FPK1P53739 893 aa8.15□□□□□ -1.1
MTF1YMR228W SAS4Q04003 481 aa8.15□□□□□ -1.1
MTF1YMR228W RPL34BP40525 121 aaKnown RBP8.14□□□□□ -1.11
MTF1YMR228W YNL115CP53925 644 aa8.13□□□□□ -1.11
MTF1YMR228W ERF2Q06551 359 aa8.13□□□□□ -1.11
MTF1YMR228W SIT4P20604 311 aa8.12□□□□□ -1.11
MTF1YMR228W RTF1P53064 558 aa8.12□□□□□ -1.11
MTF1YMR228W TY1A-DR4O74302 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-HP0C2I4 478 aaKnown RBP8.11□□□□□ -1.11
MTF1YMR228W TY1A-AP0CX57 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-PR1P0CX58 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-ORP0CX59 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-PR2P0CX60 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-DR5P0CX65 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-ER2P0CX66 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-GR3P0CX67 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-LR1P0CX68 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-MR2P0CX69 440 aa8.11□□□□□ -1.11
MTF1YMR228W PAT1P25644 796 aaKnown RBP8.11□□□□□ -1.11
MTF1YMR228W SPT16P32558 1035 aaKnown RBP8.11□□□□□ -1.11
MTF1YMR228W TY1A-JR2P47099 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-DR1Q03856 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-ML1Q04706 440 aaKnown RBP8.11□□□□□ -1.11
MTF1YMR228W TY1A-BRQ12217 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-NL2Q12470 440 aa8.11□□□□□ -1.11
MTF1YMR228W TY1A-GR2Q12485 440 aa8.11□□□□□ -1.11
MTF1YMR228W HSL1P34244 1518 aa8.1□□□□□ -1.11
MTF1YMR228W SEC2P17065 759 aa8.1□□□□□ -1.11
MTF1YMR228W SLY41P22215 453 aa8.1□□□□□ -1.11
MTF1YMR228W GLN1P32288 370 aaKnown RBP8.1□□□□□ -1.11
MTF1YMR228W ATG32P40458 529 aa8.1□□□□□ -1.11
MTF1YMR228W MRF1P30775 413 aaPredicted RBP8.09□□□□□ -1.11
MTF1YMR228W HST2P53686 357 aa8.09□□□□□ -1.11
MTF1YMR228W MMP1Q12372 583 aa8.09□□□□□ -1.11
MTF1YMR228W SCJ1P25303 377 aa8.08□□□□□ -1.12
MTF1YMR228W RRN7P40992 514 aa8.08□□□□□ -1.12
MTF1YMR228W SPT6P23615 1451 aaKnown RBP8.07□□□□□ -1.12
MTF1YMR228W TYW1Q08960 810 aaKnown RBP8.07□□□□□ -1.12
MTF1YMR228W SLD2P34252 453 aa8.05□□□□□ -1.12
MTF1YMR228W YBL036CP38197 257 aa8.05□□□□□ -1.12
MTF1YMR228W ERG12P07277 443 aa8.04□□□□□ -1.12
MTF1YMR228W TIF1P10081 395 aaKnown RBP8.04□□□□□ -1.12
MTF1YMR228W ESS1P22696 170 aa8.04□□□□□ -1.12
MTF1YMR228W TUB4P53378 473 aa8.03□□□□□ -1.12
MTF1YMR228W RPL34AP87262 121 aaPredicted RBP8.03□□□□□ -1.12
MTF1YMR228W DPS1P04802 557 aaKnown RBP8.02□□□□□ -1.13
MTF1YMR228W YEL077CQ3E7X8 1277 aa8.02□□□□□ -1.13
MTF1YMR228W TBF1Q02457 562 aa8.01□□□□□ -1.13
MTF1YMR228W PKH3Q03306 898 aaPredicted RBP8.01□□□□□ -1.13
MTF1YMR228W KTR1P27810 393 aaKnown RBP8□□□□□ -1.13
MTF1YMR228W NOP7P53261 605 aaKnown RBP8□□□□□ -1.13
MTF1YMR228W ECM5Q03214 1411 aa8□□□□□ -1.13
MTF1YMR228W CPS1P27614 576 aa7.99□□□□□ -1.13
MTF1YMR228W PAC1P39946 494 aaKnown RBP7.99□□□□□ -1.13
MTF1YMR228W PUS6P53294 404 aa7.99□□□□□ -1.13
MTF1YMR228W AGE1Q04412 482 aa7.99□□□□□ -1.13
MTF1YMR228W YPR204WQ08995 1032 aa7.99□□□□□ -1.13
MTF1YMR228W YJU3P28321 313 aa7.98□□□□□ -1.13
MTF1YMR228W RTG2P32608 588 aaKnown RBP7.98□□□□□ -1.13
MTF1YMR228W TRM1P15565 570 aaKnown RBP7.97□□□□□ -1.13
MTF1YMR228W SPA2P23201 1466 aaKnown RBP7.96□□□□□ -1.13
MTF1YMR228W ARG8P18544 423 aa7.96□□□□□ -1.14
MTF1YMR228W SDH2P21801 266 aa7.96□□□□□ -1.14
MTF1YMR228W AMS1P22855 1083 aa7.96□□□□□ -1.14
MTF1YMR228W BIO2P32451 375 aa7.96□□□□□ -1.14
MTF1YMR228W CDC3P32457 520 aaKnown RBP7.96□□□□□ -1.14
MTF1YMR228W CSE4P36012 229 aa7.96□□□□□ -1.14
MTF1YMR228W TTI1P36097 1038 aa7.96□□□□□ -1.14
MTF1YMR228W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms