RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W MMP1Q12372 583 aa8.45□□□□□ -1.06
SPO20YMR017W SCJ1P25303 377 aa8.44□□□□□ -1.06
SPO20YMR017W NPL4P33755 580 aa8.44□□□□□ -1.06
SPO20YMR017W BRL1P38770 471 aa8.44□□□□□ -1.06
SPO20YMR017W PTC2P39966 464 aaKnown RBP8.44□□□□□ -1.06
SPO20YMR017W RAM1P22007 431 aa8.43□□□□□ -1.06
SPO20YMR017W STR2P47164 639 aa8.43□□□□□ -1.06
SPO20YMR017W RTF1P53064 558 aa8.43□□□□□ -1.06
SPO20YMR017W KEX2P13134 814 aa8.42□□□□□ -1.06
SPO20YMR017W CHL1P22516 861 aaPredicted RBP8.42□□□□□ -1.06
SPO20YMR017W ESS1P22696 170 aa8.42□□□□□ -1.06
SPO20YMR017W ISM1P48526 1002 aa8.42□□□□□ -1.06
SPO20YMR017W YNL115CP53925 644 aa8.41□□□□□ -1.06
SPO20YMR017W PKH3Q03306 898 aaPredicted RBP8.4□□□□□ -1.06
SPO20YMR017W SLY41P22215 453 aa8.39□□□□□ -1.07
SPO20YMR017W ERF2Q06551 359 aa8.39□□□□□ -1.07
SPO20YMR017W YPR015CQ12531 247 aa8.39□□□□□ -1.07
SPO20YMR017W PKC1P24583 1151 aa8.37□□□□□ -1.07
SPO20YMR017W YJU3P28321 313 aa8.37□□□□□ -1.07
SPO20YMR017W YML082WQ04533 649 aaKnown RBP8.37□□□□□ -1.07
SPO20YMR017W RAD59Q12223 238 aa8.36□□□□□ -1.07
SPO20YMR017W TY1A-DR4O74302 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-HP0C2I4 478 aaKnown RBP8.35□□□□□ -1.07
SPO20YMR017W TY1A-AP0CX57 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-PR1P0CX58 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-ORP0CX59 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-PR2P0CX60 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-DR5P0CX65 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-ER2P0CX66 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-GR3P0CX67 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-LR1P0CX68 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-MR2P0CX69 440 aa8.35□□□□□ -1.07
SPO20YMR017W GCD11P32481 527 aaKnown RBP8.35□□□□□ -1.07
SPO20YMR017W TY1A-JR2P47099 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-DR1Q03856 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-ML1Q04706 440 aaKnown RBP8.35□□□□□ -1.07
SPO20YMR017W BUD20Q08004 166 aaPredicted RBP8.35□□□□□ -1.07
SPO20YMR017W TY1A-BRQ12217 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-NL2Q12470 440 aa8.35□□□□□ -1.07
SPO20YMR017W TY1A-GR2Q12485 440 aa8.35□□□□□ -1.07
SPO20YMR017W ARG8P18544 423 aa8.33□□□□□ -1.08
SPO20YMR017W SEC2P17065 759 aa8.32□□□□□ -1.08
SPO20YMR017W LAM6Q08001 693 aa8.31□□□□□ -1.08
SPO20YMR017W PRT1P06103 763 aaKnown RBP8.3□□□□□ -1.08
SPO20YMR017W TRM1P15565 570 aaKnown RBP8.3□□□□□ -1.08
SPO20YMR017W YBL036CP38197 257 aa8.29□□□□□ -1.08
SPO20YMR017W TBF1Q02457 562 aa8.29□□□□□ -1.08
SPO20YMR017W RSC30P38781 883 aa8.28□□□□□ -1.08
SPO20YMR017W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
SPO20YMR017W PUS6P53294 404 aa8.28□□□□□ -1.08
SPO20YMR017W TUB4P53378 473 aa8.28□□□□□ -1.08
SPO20YMR017W AGE1Q04412 482 aa8.28□□□□□ -1.08
SPO20YMR017W RLF2Q12495 606 aa8.28□□□□□ -1.08
SPO20YMR017W YJL007CP47080 104 aa8.27□□□□□ -1.09
SPO20YMR017W RRN7P40992 514 aa8.25□□□□□ -1.09
SPO20YMR017W CSE4P36012 229 aa8.24□□□□□ -1.09
SPO20YMR017W GYP1Q08484 637 aa8.24□□□□□ -1.09
SPO20YMR017W BIO2P32451 375 aa8.23□□□□□ -1.09
SPO20YMR017W VRP1P37370 817 aa8.23□□□□□ -1.09
SPO20YMR017W PAC1P39946 494 aaKnown RBP8.23□□□□□ -1.09
SPO20YMR017W BIM1P40013 344 aa8.23□□□□□ -1.09
SPO20YMR017W YDL206WQ12424 762 aa8.23□□□□□ -1.09
SPO20YMR017W MAK16P10962 306 aaPredicted RBP8.21□□□□□ -1.1
SPO20YMR017W PAT1P25644 796 aaKnown RBP8.21□□□□□ -1.1
SPO20YMR017W ATG32P40458 529 aa8.21□□□□□ -1.1
SPO20YMR017W SAS4Q04003 481 aa8.21□□□□□ -1.1
SPO20YMR017W SPT16P32558 1035 aaKnown RBP8.2□□□□□ -1.1
SPO20YMR017W BCK2P33306 851 aa8.18□□□□□ -1.1
SPO20YMR017W RPA14P50106 137 aa8.18□□□□□ -1.1
SPO20YMR017W SPT5P27692 1063 aaKnown RBP8.17□□□□□ -1.1
SPO20YMR017W RPL34BP40525 121 aaKnown RBP8.17□□□□□ -1.1
SPO20YMR017W YNL108CP53929 270 aa8.16□□□□□ -1.1
SPO20YMR017W ALR1Q08269 859 aa8.16□□□□□ -1.1
SPO20YMR017W PDC1P06169 563 aaKnown RBP8.15□□□□□ -1.1
SPO20YMR017W TIF1P10081 395 aaKnown RBP8.15□□□□□ -1.1
SPO20YMR017W KXD1P53158 218 aa8.15□□□□□ -1.1
SPO20YMR017W YPR097WQ06839 1073 aa8.15□□□□□ -1.1
SPO20YMR017W ERG12P07277 443 aa8.12□□□□□ -1.11
SPO20YMR017W YDJ1P25491 409 aaKnown RBP8.12□□□□□ -1.11
SPO20YMR017W NAF1P53919 492 aaKnown RBP8.12□□□□□ -1.11
SPO20YMR017W SUP45P12385 437 aaKnown RBP8.11□□□□□ -1.11
SPO20YMR017W MRF1P30775 413 aaPredicted RBP8.11□□□□□ -1.11
SPO20YMR017W SDH2P21801 266 aa8.1□□□□□ -1.11
SPO20YMR017W HXT10P43581 546 aa8.1□□□□□ -1.11
SPO20YMR017W MOD5P07884 428 aa8.09□□□□□ -1.11
SPO20YMR017W RTG2P32608 588 aaKnown RBP8.09□□□□□ -1.11
SPO20YMR017W ENO2P00925 437 aaKnown RBP8.08□□□□□ -1.12
SPO20YMR017W TPD3P31383 635 aa8.08□□□□□ -1.12
SPO20YMR017W XDJ1P39102 459 aa8.08□□□□□ -1.12
SPO20YMR017W RRD1P40454 393 aaKnown RBP8.08□□□□□ -1.12
SPO20YMR017W YPR204WQ08995 1032 aa8.08□□□□□ -1.12
SPO20YMR017W TEC1P18412 486 aa8.06□□□□□ -1.12
SPO20YMR017W MCM16Q12262 181 aa8.06□□□□□ -1.12
SPO20YMR017W FIG4P42837 879 aa8.05□□□□□ -1.12
SPO20YMR017W YPP1P46951 817 aa8.04□□□□□ -1.12
SPO20YMR017W RIM21P48565 533 aa8.04□□□□□ -1.12
SPO20YMR017W YEL077CQ3E7X8 1277 aa8.03□□□□□ -1.12
SPO20YMR017W ENO1P00924 437 aaKnown RBP8.02□□□□□ -1.13
SPO20YMR017W CST6P40535 587 aa8.02□□□□□ -1.13
SPO20YMR017W BDP1P46678 594 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms