RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C ELP4Q02884 456 aaKnown RBP5.98□□□□□ -1.45
VPS33YLR396C RAM1P22007 431 aa5.98□□□□□ -1.45
VPS33YLR396C RTF1P53064 558 aa5.98□□□□□ -1.45
VPS33YLR396C ESS1P22696 170 aa5.97□□□□□ -1.45
VPS33YLR396C PKC1P24583 1151 aa5.97□□□□□ -1.45
VPS33YLR396C SPT23P35210 1082 aa5.97□□□□□ -1.45
VPS33YLR396C PRE3P38624 215 aa5.97□□□□□ -1.45
VPS33YLR396C STR2P47164 639 aa5.97□□□□□ -1.45
VPS33YLR396C YNL115CP53925 644 aa5.96□□□□□ -1.46
VPS33YLR396C KEX2P13134 814 aa5.95□□□□□ -1.46
VPS33YLR396C ISM1P48526 1002 aa5.95□□□□□ -1.46
VPS33YLR396C PKH3Q03306 898 aaPredicted RBP5.95□□□□□ -1.46
VPS33YLR396C ERF2Q06551 359 aa5.95□□□□□ -1.46
VPS33YLR396C SLY41P22215 453 aa5.94□□□□□ -1.46
VPS33YLR396C YJU3P28321 313 aa5.94□□□□□ -1.46
VPS33YLR396C NPL4P33755 580 aa5.94□□□□□ -1.46
VPS33YLR396C PTC2P39966 464 aaKnown RBP5.94□□□□□ -1.46
VPS33YLR396C YPR015CQ12531 247 aa5.94□□□□□ -1.46
VPS33YLR396C CHL1P22516 861 aaPredicted RBP5.93□□□□□ -1.46
VPS33YLR396C RAD59Q12223 238 aa5.93□□□□□ -1.46
VPS33YLR396C RLF2Q12495 606 aa5.93□□□□□ -1.46
VPS33YLR396C YML082WQ04533 649 aaKnown RBP5.92□□□□□ -1.46
VPS33YLR396C TY1A-DR4O74302 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-HP0C2I4 478 aaKnown RBP5.92□□□□□ -1.46
VPS33YLR396C TY1A-AP0CX57 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-PR1P0CX58 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-ORP0CX59 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-PR2P0CX60 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-DR5P0CX65 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-ER2P0CX66 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-GR3P0CX67 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-LR1P0CX68 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-MR2P0CX69 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-JR2P47099 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-DR1Q03856 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-ML1Q04706 440 aaKnown RBP5.92□□□□□ -1.46
VPS33YLR396C BUD20Q08004 166 aaPredicted RBP5.92□□□□□ -1.46
VPS33YLR396C TY1A-BRQ12217 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-NL2Q12470 440 aa5.92□□□□□ -1.46
VPS33YLR396C TY1A-GR2Q12485 440 aa5.92□□□□□ -1.46
VPS33YLR396C SEC2P17065 759 aa5.91□□□□□ -1.46
VPS33YLR396C RSC30P38781 883 aa5.91□□□□□ -1.46
VPS33YLR396C ARG8P18544 423 aa5.89□□□□□ -1.47
VPS33YLR396C GCD11P32481 527 aaKnown RBP5.89□□□□□ -1.47
VPS33YLR396C AGE1Q04412 482 aa5.89□□□□□ -1.47
VPS33YLR396C LAM6Q08001 693 aa5.89□□□□□ -1.47
VPS33YLR396C TRM1P15565 570 aaKnown RBP5.88□□□□□ -1.47
VPS33YLR396C YBL036CP38197 257 aa5.88□□□□□ -1.47
VPS33YLR396C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
VPS33YLR396C YJL007CP47080 104 aa5.87□□□□□ -1.47
VPS33YLR396C PUS6P53294 404 aa5.87□□□□□ -1.47
VPS33YLR396C CSE4P36012 229 aa5.87□□□□□ -1.47
VPS33YLR396C BIM1P40013 344 aa5.87□□□□□ -1.47
VPS33YLR396C PRT1P06103 763 aaKnown RBP5.86□□□□□ -1.47
VPS33YLR396C TUB4P53378 473 aa5.86□□□□□ -1.47
VPS33YLR396C BIO2P32451 375 aa5.86□□□□□ -1.47
VPS33YLR396C ATG32P40458 529 aa5.85□□□□□ -1.47
VPS33YLR396C TBF1Q02457 562 aa5.84□□□□□ -1.47
VPS33YLR396C MAK16P10962 306 aaPredicted RBP5.83□□□□□ -1.48
VPS33YLR396C PAC1P39946 494 aaKnown RBP5.83□□□□□ -1.48
VPS33YLR396C YDL206WQ12424 762 aa5.83□□□□□ -1.48
VPS33YLR396C RRN7P40992 514 aa5.82□□□□□ -1.48
VPS33YLR396C TIF1P10081 395 aaKnown RBP5.81□□□□□ -1.48
VPS33YLR396C SPT5P27692 1063 aaKnown RBP5.8□□□□□ -1.48
VPS33YLR396C RPA14P50106 137 aa5.8□□□□□ -1.48
VPS33YLR396C SAS4Q04003 481 aa5.8□□□□□ -1.48
VPS33YLR396C SUP45P12385 437 aaKnown RBP5.79□□□□□ -1.48
VPS33YLR396C YNL108CP53929 270 aa5.79□□□□□ -1.48
VPS33YLR396C GYP1Q08484 637 aa5.79□□□□□ -1.48
VPS33YLR396C ERG12P07277 443 aa5.78□□□□□ -1.48
VPS33YLR396C YDJ1P25491 409 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C PAT1P25644 796 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C VRP1P37370 817 aa5.78□□□□□ -1.48
VPS33YLR396C RPL34BP40525 121 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C YPR097WQ06839 1073 aa5.78□□□□□ -1.48
VPS33YLR396C PDC1P06169 563 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C SPT16P32558 1035 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C NAF1P53919 492 aaKnown RBP5.78□□□□□ -1.48
VPS33YLR396C ALR1Q08269 859 aa5.77□□□□□ -1.49
VPS33YLR396C RTG2P32608 588 aaKnown RBP5.76□□□□□ -1.49
VPS33YLR396C ENO2P00925 437 aaKnown RBP5.75□□□□□ -1.49
VPS33YLR396C KXD1P53158 218 aa5.75□□□□□ -1.49
VPS33YLR396C MOD5P07884 428 aa5.75□□□□□ -1.49
VPS33YLR396C TPD3P31383 635 aa5.75□□□□□ -1.49
VPS33YLR396C HXT10P43581 546 aa5.75□□□□□ -1.49
VPS33YLR396C SDH2P21801 266 aa5.74□□□□□ -1.49
VPS33YLR396C BCK2P33306 851 aa5.74□□□□□ -1.49
VPS33YLR396C YPR204WQ08995 1032 aa5.74□□□□□ -1.49
VPS33YLR396C RIM21P48565 533 aa5.73□□□□□ -1.49
VPS33YLR396C RRD1P40454 393 aaKnown RBP5.73□□□□□ -1.49
VPS33YLR396C MRF1P30775 413 aaPredicted RBP5.72□□□□□ -1.49
VPS33YLR396C MCM16Q12262 181 aa5.72□□□□□ -1.49
VPS33YLR396C FIG4P42837 879 aa5.71□□□□□ -1.49
VPS33YLR396C MRX10Q05648 414 aa5.71□□□□□ -1.49
VPS33YLR396C ENO1P00924 437 aaKnown RBP5.71□□□□□ -1.5
VPS33YLR396C YPR084WQ06821 456 aa5.71□□□□□ -1.5
VPS33YLR396C TEC1P18412 486 aa5.7□□□□□ -1.5
VPS33YLR396C YPP1P46951 817 aa5.7□□□□□ -1.5
VPS33YLR396C TTI1P36097 1038 aa5.7□□□□□ -1.5
VPS33YLR396C VAC17P25591 423 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms