RNA–Protein interactions for RNA: YLR381W

CTF3, Transcript of Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p, yeastyeast

Gene CTF3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF3YLR381W YNL050CP53952 270 aa8.65□□□□□ -1.02
CTF3YLR381W SIN3P22579 1536 aa8.65□□□□□ -1.03
CTF3YLR381W RAD3P06839 778 aa8.65□□□□□ -1.03
CTF3YLR381W ZUO1P32527 433 aaKnown RBP8.65□□□□□ -1.03
CTF3YLR381W SWH1P35845 1188 aa8.65□□□□□ -1.03
CTF3YLR381W UTP13Q05946 817 aaKnown RBP8.65□□□□□ -1.03
CTF3YLR381W BPT1P14772 1559 aa8.65□□□□□ -1.03
CTF3YLR381W TSC11P40061 1430 aa8.64□□□□□ -1.03
CTF3YLR381W YMR124WP39523 943 aaKnown RBP8.64□□□□□ -1.03
CTF3YLR381W SPT16P32558 1035 aaKnown RBP8.64□□□□□ -1.03
CTF3YLR381W ALD3P54114 506 aa8.64□□□□□ -1.03
CTF3YLR381W YLL054CQ12244 843 aa8.64□□□□□ -1.03
CTF3YLR381W SEC39Q12745 709 aa8.64□□□□□ -1.03
CTF3YLR381W PXR1P53335 271 aaPredicted RBP8.63□□□□□ -1.03
CTF3YLR381W RIM101P33400 625 aa8.62□□□□□ -1.03
CTF3YLR381W MDM38Q08179 573 aa8.62□□□□□ -1.03
CTF3YLR381W PUS1Q12211 544 aaKnown RBP8.62□□□□□ -1.03
CTF3YLR381W TY1B-DR4Q07793 1604 aa8.62□□□□□ -1.03
CTF3YLR381W NUP159P40477 1460 aa8.62□□□□□ -1.03
CTF3YLR381W KAR3P17119 729 aa8.62□□□□□ -1.03
CTF3YLR381W RPC82P32349 654 aa8.62□□□□□ -1.03
CTF3YLR381W TOA1P32773 286 aa8.62□□□□□ -1.03
CTF3YLR381W MRS2Q01926 470 aa8.62□□□□□ -1.03
CTF3YLR381W GCN2P15442 1659 aa8.61□□□□□ -1.03
CTF3YLR381W NUP157P40064 1391 aaKnown RBP8.61□□□□□ -1.03
CTF3YLR381W PEA2P40091 420 aa8.61□□□□□ -1.03
CTF3YLR381W SPB4P25808 606 aaPredicted RBP8.61□□□□□ -1.03
CTF3YLR381W VID30P53076 958 aa8.61□□□□□ -1.03
CTF3YLR381W PDS5Q04264 1277 aa8.61□□□□□ -1.03
CTF3YLR381W STU2P46675 888 aa8.6□□□□□ -1.03
CTF3YLR381W YGL140CP53120 1219 aa8.6□□□□□ -1.03
CTF3YLR381W COG8Q04632 607 aa8.6□□□□□ -1.03
CTF3YLR381W SPT5P27692 1063 aaKnown RBP8.6□□□□□ -1.03
CTF3YLR381W ITC1P53125 1264 aa8.6□□□□□ -1.03
CTF3YLR381W HAP5Q02516 242 aa8.6□□□□□ -1.03
CTF3YLR381W SFI1Q12369 946 aa8.6□□□□□ -1.03
CTF3YLR381W HSL1P34244 1518 aa8.59□□□□□ -1.03
CTF3YLR381W SSA1P10591 642 aaKnown RBP8.59□□□□□ -1.03
CTF3YLR381W SSA2P10592 639 aaKnown RBP8.59□□□□□ -1.03
CTF3YLR381W MCM2P29469 868 aa8.59□□□□□ -1.03
CTF3YLR381W CDC11P32458 415 aa8.59□□□□□ -1.03
CTF3YLR381W BDP1P46678 594 aa8.59□□□□□ -1.03
CTF3YLR381W YMR1P47147 688 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
CTF3YLR381W YMR102CQ03177 834 aa8.59□□□□□ -1.03
CTF3YLR381W SML1Q04964 104 aa8.59□□□□□ -1.03
CTF3YLR381W PSE1P32337 1089 aaKnown RBP8.58□□□□□ -1.04
CTF3YLR381W RTT107P38850 1070 aa8.58□□□□□ -1.04
CTF3YLR381W CEP3P40969 608 aa8.58□□□□□ -1.04
CTF3YLR381W ORM2Q06144 216 aa8.58□□□□□ -1.04
CTF3YLR381W SUP35P05453 685 aaKnown RBP8.57□□□□□ -1.04
CTF3YLR381W RIO2P40160 425 aaKnown RBP8.57□□□□□ -1.04
CTF3YLR381W NDC80P40460 691 aa8.57□□□□□ -1.04
CTF3YLR381W NDL1Q06568 189 aa8.57□□□□□ -1.04
CTF3YLR381W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
CTF3YLR381W SSK2P53599 1579 aa8.56□□□□□ -1.04
CTF3YLR381W YCF1P39109 1515 aaKnown RBP8.56□□□□□ -1.04
CTF3YLR381W RKM3P38222 552 aa8.56□□□□□ -1.04
CTF3YLR381W YOR389WQ08912 624 aa8.56□□□□□ -1.04
CTF3YLR381W TY1B-AO13527 1196 aaKnown RBP8.56□□□□□ -1.04
CTF3YLR381W PSO2P30620 661 aa8.56□□□□□ -1.04
CTF3YLR381W PUP2P32379 260 aa8.56□□□□□ -1.04
CTF3YLR381W NFI1Q12216 726 aa8.55□□□□□ -1.04
CTF3YLR381W MGA2P40578 1113 aa8.54□□□□□ -1.04
CTF3YLR381W IAH1P41734 238 aa8.53□□□□□ -1.04
CTF3YLR381W HSC82P15108 705 aaKnown RBP8.53□□□□□ -1.04
CTF3YLR381W MSH1P25846 959 aa8.53□□□□□ -1.04
CTF3YLR381W MIC60P36112 540 aa8.53□□□□□ -1.04
CTF3YLR381W LEM3P42838 414 aa8.53□□□□□ -1.04
CTF3YLR381W MPP10P47083 593 aaKnown RBP8.53□□□□□ -1.04
CTF3YLR381W PBY1P38254 753 aa8.52□□□□□ -1.05
CTF3YLR381W SUB1P54000 292 aaKnown RBP8.52□□□□□ -1.05
CTF3YLR381W TY4B-PA0A0B7P3V8 1104 aa8.52□□□□□ -1.05
CTF3YLR381W MCM1P11746 286 aa8.52□□□□□ -1.05
CTF3YLR381W YKR023WP36119 530 aaKnown RBP8.52□□□□□ -1.05
CTF3YLR381W VPS41P38959 992 aa8.52□□□□□ -1.05
CTF3YLR381W GGA1Q06336 557 aa8.52□□□□□ -1.05
CTF3YLR381W SNQ2P32568 1501 aaKnown RBP8.51□□□□□ -1.05
CTF3YLR381W PDR5P33302 1511 aaKnown RBP8.5□□□□□ -1.05
CTF3YLR381W NAB3P38996 802 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
CTF3YLR381W AIM20P40451 204 aa8.5□□□□□ -1.05
CTF3YLR381W HOS4P40480 1083 aa8.5□□□□□ -1.05
CTF3YLR381W PEX19Q07418 342 aa8.5□□□□□ -1.05
CTF3YLR381W CYC8P14922 966 aa8.49□□□□□ -1.05
CTF3YLR381W KOG1P38873 1557 aa8.49□□□□□ -1.05
CTF3YLR381W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
CTF3YLR381W GIN4Q12263 1142 aa8.49□□□□□ -1.05
CTF3YLR381W MET5P47169 1442 aa8.49□□□□□ -1.05
CTF3YLR381W ARR1Q06596 294 aa8.48□□□□□ -1.05
CTF3YLR381W SLP1Q12232 587 aa8.48□□□□□ -1.05
CTF3YLR381W HIR3P47171 1648 aa8.48□□□□□ -1.05
CTF3YLR381W SEC14P24280 304 aaKnown RBP8.48□□□□□ -1.05
CTF3YLR381W OLA1P38219 394 aaKnown RBP8.48□□□□□ -1.05
CTF3YLR381W SEC9P40357 651 aa8.48□□□□□ -1.05
CTF3YLR381W ORC1P54784 914 aaPredicted RBP8.48□□□□□ -1.05
CTF3YLR381W ESP1Q03018 1630 aa8.47□□□□□ -1.05
CTF3YLR381W PHO87P25360 923 aa8.47□□□□□ -1.05
CTF3YLR381W DPH5P32469 300 aaPredicted RBP8.47□□□□□ -1.05
CTF3YLR381W RAD50P12753 1312 aa8.46□□□□□ -1.05
CTF3YLR381W GDT1P38301 280 aaPredicted RBP8.46□□□□□ -1.05
CTF3YLR381W SAP1P39955 897 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms