RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	MMP1	Q12372	583 aa		7.28	□□□□□ -1.24
DBP9	YLR276C	YDJ1	P25491	409 aa	Known RBP	7.27	□□□□□ -1.25
DBP9	YLR276C	YJU3	P28321	313 aa		7.26	□□□□□ -1.25
DBP9	YLR276C	TGL4	P36165	910 aa		7.26	□□□□□ -1.25
DBP9	YLR276C	RIM21	P48565	533 aa		7.26	□□□□□ -1.25
DBP9	YLR276C	IPL1	P38991	367 aa		7.25	□□□□□ -1.25
DBP9	YLR276C	YMR196W	Q04336	1088 aa		7.25	□□□□□ -1.25
DBP9	YLR276C	YTA7	P40340	1379 aa		7.25	□□□□□ -1.25
DBP9	YLR276C	YAP5	P40574	245 aa		7.24	□□□□□ -1.25
DBP9	YLR276C	RPS0B	P46654	252 aa	Known RBP	7.24	□□□□□ -1.25
DBP9	YLR276C	SPT5	P27692	1063 aa	Known RBP	7.23	□□□□□ -1.25
DBP9	YLR276C	SIT4	P20604	311 aa		7.23	□□□□□ -1.25
DBP9	YLR276C	RSC30	P38781	883 aa		7.23	□□□□□ -1.25
DBP9	YLR276C	STM1	P39015	273 aa	Known RBP	7.23	□□□□□ -1.25
DBP9	YLR276C	MON2	P48563	1636 aa	Predicted RBP	7.22	□□□□□ -1.25
DBP9	YLR276C	PEP12	P32854	288 aa		7.22	□□□□□ -1.25
DBP9	YLR276C	OCA5	P38738	679 aa		7.22	□□□□□ -1.25
DBP9	YLR276C	CWC22	P53333	577 aa	Known RBP	7.22	□□□□□ -1.25
DBP9	YLR276C	XRN1	P22147	1528 aa	Known RBP	7.22	□□□□□ -1.25
DBP9	YLR276C	CLC1	P17891	233 aa		7.21	□□□□□ -1.25
DBP9	YLR276C	IME2	P32581	645 aa		7.21	□□□□□ -1.25
DBP9	YLR276C	ILV3	P39522	585 aa	Known RBP	7.21	□□□□□ -1.25
DBP9	YLR276C	MAK16	P10962	306 aa	Predicted RBP	7.2	□□□□□ -1.26
DBP9	YLR276C	ARG8	P18544	423 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	ASF1	P32447	279 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	PRS1	P32895	427 aa	Known RBP	7.2	□□□□□ -1.26
DBP9	YLR276C	ALD2	P47771	506 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	RRP15	Q06511	250 aa	Predicted RBP	7.2	□□□□□ -1.26
DBP9	YLR276C	GYP5	Q12344	894 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	SPT7	P35177	1332 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	ITT1	Q04638	464 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	YPR109W	Q06104	294 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	YBL113C	Q7M4S9	792 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	INO80	P53115	1489 aa		7.2	□□□□□ -1.26
DBP9	YLR276C	SEC3	P33332	1336 aa	Known RBP	7.2	□□□□□ -1.26
DBP9	YLR276C	CSC1	Q06538	782 aa		7.18	□□□□□ -1.26
DBP9	YLR276C	RDS2	P19541	446 aa	Known RBP	7.18	□□□□□ -1.26
DBP9	YLR276C	SEC20	P28791	383 aa		7.18	□□□□□ -1.26
DBP9	YLR276C	ERP5	P38819	212 aa		7.18	□□□□□ -1.26
DBP9	YLR276C	SPP41	P38904	1435 aa		7.17	□□□□□ -1.26
DBP9	YLR276C	ECM5	Q03214	1411 aa		7.17	□□□□□ -1.26
DBP9	YLR276C	AI4	P03878	556 aa		7.17	□□□□□ -1.26
DBP9	YLR276C	MPH3	P0CE00	602 aa		7.17	□□□□□ -1.26
DBP9	YLR276C	MSC6	Q08818	692 aa	Known RBP	7.17	□□□□□ -1.26
DBP9	YLR276C	TRL1	P09880	827 aa	Known RBP	7.15	□□□□□ -1.27
DBP9	YLR276C	MNN4	P36044	1178 aa		7.15	□□□□□ -1.27
DBP9	YLR276C	ECM23	Q02710	187 aa		7.15	□□□□□ -1.27
DBP9	YLR276C	TRM732	Q03496	1420 aa		7.14	□□□□□ -1.27
DBP9	YLR276C	ATE1	P16639	503 aa		7.14	□□□□□ -1.27
DBP9	YLR276C	SLI15	P38283	698 aa		7.13	□□□□□ -1.27
DBP9	YLR276C	TPS3	P38426	1054 aa	Known RBP	7.13	□□□□□ -1.27
DBP9	YLR276C	POL5	P39985	1022 aa	Known RBP	7.13	□□□□□ -1.27
DBP9	YLR276C	DOS2	P54858	310 aa		7.13	□□□□□ -1.27
DBP9	YLR276C	LAM6	Q08001	693 aa		7.13	□□□□□ -1.27
DBP9	YLR276C	SPC42	P36094	363 aa		7.12	□□□□□ -1.27
DBP9	YLR276C	BRN1	P38170	754 aa		7.12	□□□□□ -1.27
DBP9	YLR276C	YPP1	P46951	817 aa		7.12	□□□□□ -1.27
DBP9	YLR276C	NAF1	P53919	492 aa	Known RBP	7.12	□□□□□ -1.27
DBP9	YLR276C	TFB4	Q12004	338 aa		7.12	□□□□□ -1.27
DBP9	YLR276C	DCW1	P36091	449 aa		7.11	□□□□□ -1.27
DBP9	YLR276C	OPY1	P38271	328 aa		7.11	□□□□□ -1.27
DBP9	YLR276C	MDJ2	P42834	146 aa		7.11	□□□□□ -1.27
DBP9	YLR276C	YHL050C	P38721	697 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	YHR219W	P38900	624 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	WHI5	Q12416	295 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	YEL077C	Q3E7X8	1277 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	GAL2	P13181	574 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	POL32	P47110	350 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	CWC15	Q03772	175 aa	Known RBP	7.1	□□□□□ -1.27
DBP9	YLR276C	MCM16	Q12262	181 aa		7.1	□□□□□ -1.27
DBP9	YLR276C	SLY41	P22215	453 aa		7.09	□□□□□ -1.27
DBP9	YLR276C	UBX7	P38349	436 aa		7.09	□□□□□ -1.27
DBP9	YLR276C	KTR7	P40504	517 aa		7.09	□□□□□ -1.27
DBP9	YLR276C	PPX1	P38698	397 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	YGR130C	P53278	816 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	SVF1	Q05515	481 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	CDC73	Q06697	393 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	CFT1	Q06632	1357 aa	Known RBP	7.08	□□□□□ -1.28
DBP9	YLR276C	TIF4632	P39936	914 aa	Known RBP	7.08	□□□□□ -1.28
DBP9	YLR276C	FAR11	P53917	953 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	KAR5	Q04746	504 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	STB3	Q12427	513 aa		7.08	□□□□□ -1.28
DBP9	YLR276C	RPP1B	P10622	106 aa	Known RBP	7.07	□□□□□ -1.28
DBP9	YLR276C	KRI1	P42846	591 aa	Known RBP	7.07	□□□□□ -1.28
DBP9	YLR276C	DAN4	P47179	1161 aa		7.07	□□□□□ -1.28
DBP9	YLR276C	ENV11	P53246	860 aa		7.07	□□□□□ -1.28
DBP9	YLR276C	IKI3	Q06706	1349 aa	Known RBP	7.06	□□□□□ -1.28
DBP9	YLR276C	TGL3	P40308	642 aa		7.06	□□□□□ -1.28
DBP9	YLR276C	ALD4	P46367	519 aa	Known RBP	7.06	□□□□□ -1.28
DBP9	YLR276C	FPR4	Q06205	392 aa	Predicted RBP	7.06	□□□□□ -1.28
DBP9	YLR276C	TUM1	Q08686	304 aa	Known RBP	7.06	□□□□□ -1.28
DBP9	YLR276C	TRM1	P15565	570 aa	Known RBP	7.05	□□□□□ -1.28
DBP9	YLR276C	SIS1	P25294	352 aa	Known RBP	7.05	□□□□□ -1.28
DBP9	YLR276C	FPR3	P38911	411 aa	Known RBP	7.05	□□□□□ -1.28
DBP9	YLR276C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.05	□□□□□ -1.28	not detected
DBP9	YLR276C	NNF1	P47149	201 aa		7.05	□□□□□ -1.28
DBP9	YLR276C	YNL115C	P53925	644 aa		7.05	□□□□□ -1.28
DBP9	YLR276C	PEP1	P32319	1579 aa		7.05	□□□□□ -1.28
DBP9	YLR276C	HTA1	P04911	132 aa	Known RBP	7.05	□□□□□ -1.28
DBP9	YLR276C	HTA2	P04912	132 aa		7.05	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms