RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W BUD20Q08004 166 aaPredicted RBP3.76□□□□□ -1.81
VPS34YLR240W TY1A-DR4O74302 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-HP0C2I4 478 aaKnown RBP3.76□□□□□ -1.81
VPS34YLR240W TY1A-AP0CX57 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-PR1P0CX58 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-ORP0CX59 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-PR2P0CX60 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-DR5P0CX65 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-ER2P0CX66 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-GR3P0CX67 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-LR1P0CX68 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-MR2P0CX69 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-JR2P47099 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-DR1Q03856 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-ML1Q04706 440 aaKnown RBP3.76□□□□□ -1.81
VPS34YLR240W TY1A-BRQ12217 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-NL2Q12470 440 aa3.76□□□□□ -1.81
VPS34YLR240W TY1A-GR2Q12485 440 aa3.76□□□□□ -1.81
VPS34YLR240W KEX2P13134 814 aa3.75□□□□□ -1.81
VPS34YLR240W YNL115CP53925 644 aa3.75□□□□□ -1.81
VPS34YLR240W PRT1P06103 763 aaKnown RBP3.74□□□□□ -1.81
VPS34YLR240W GLN1P32288 370 aaKnown RBP3.74□□□□□ -1.81
VPS34YLR240W CSN12P47130 423 aa3.74□□□□□ -1.81
VPS34YLR240W SSA2P10592 639 aaKnown RBP3.74□□□□□ -1.81
VPS34YLR240W SEC2P17065 759 aa3.74□□□□□ -1.81
VPS34YLR240W KTR1P27810 393 aaKnown RBP3.74□□□□□ -1.81
VPS34YLR240W GUA1P38625 525 aaKnown RBP3.74□□□□□ -1.81
VPS34YLR240W ERF2Q06551 359 aa3.74□□□□□ -1.81
VPS34YLR240W SAS4Q04003 481 aa3.74□□□□□ -1.81
VPS34YLR240W GCD11P32481 527 aaKnown RBP3.73□□□□□ -1.81
VPS34YLR240W HPC2Q01448 625 aa3.73□□□□□ -1.81
VPS34YLR240W MMP1Q12372 583 aa3.73□□□□□ -1.81
VPS34YLR240W XDJ1P39102 459 aa3.73□□□□□ -1.81
VPS34YLR240W GYP1Q08484 637 aa3.73□□□□□ -1.81
VPS34YLR240W TYW1Q08960 810 aaKnown RBP3.73□□□□□ -1.81
VPS34YLR240W SLY41P22215 453 aa3.72□□□□□ -1.81
VPS34YLR240W AGE1Q04412 482 aa3.72□□□□□ -1.81
VPS34YLR240W ESS1P22696 170 aa3.72□□□□□ -1.81
VPS34YLR240W SCJ1P25303 377 aa3.72□□□□□ -1.81
VPS34YLR240W RRN7P40992 514 aa3.7□□□□□ -1.82
VPS34YLR240W TUB4P53378 473 aa3.7□□□□□ -1.82
VPS34YLR240W PKH3Q03306 898 aaPredicted RBP3.7□□□□□ -1.82
VPS34YLR240W TRM1P15565 570 aaKnown RBP3.69□□□□□ -1.82
VPS34YLR240W PAT1P25644 796 aaKnown RBP3.69□□□□□ -1.82
VPS34YLR240W YJU3P28321 313 aa3.69□□□□□ -1.82
VPS34YLR240W SPT16P32558 1035 aaKnown RBP3.69□□□□□ -1.82
VPS34YLR240W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
VPS34YLR240W LAM6Q08001 693 aa3.69□□□□□ -1.82
VPS34YLR240W SDH2P21801 266 aa3.69□□□□□ -1.82
VPS34YLR240W PAC1P39946 494 aaKnown RBP3.69□□□□□ -1.82
VPS34YLR240W MRF1P30775 413 aaPredicted RBP3.68□□□□□ -1.82
VPS34YLR240W BRL1P38770 471 aa3.68□□□□□ -1.82
VPS34YLR240W PUS6P53294 404 aa3.68□□□□□ -1.82
VPS34YLR240W TFB3Q03290 321 aa3.68□□□□□ -1.82
VPS34YLR240W RAD59Q12223 238 aa3.68□□□□□ -1.82
VPS34YLR240W RSC30P38781 883 aa3.68□□□□□ -1.82
VPS34YLR240W TBF1Q02457 562 aa3.68□□□□□ -1.82
VPS34YLR240W HGH1P48362 394 aaKnown RBP3.67□□□□□ -1.82
VPS34YLR240W YDL206WQ12424 762 aa3.67□□□□□ -1.82
VPS34YLR240W ARG8P18544 423 aa3.66□□□□□ -1.82
VPS34YLR240W RPA14P50106 137 aa3.66□□□□□ -1.82
VPS34YLR240W DMA2P53924 522 aa3.66□□□□□ -1.82
VPS34YLR240W ERG12P07277 443 aa3.65□□□□□ -1.82
VPS34YLR240W MOD5P07884 428 aa3.65□□□□□ -1.82
VPS34YLR240W YEL077CQ3E7X8 1277 aa3.65□□□□□ -1.82
VPS34YLR240W PDC1P06169 563 aaKnown RBP3.65□□□□□ -1.83
VPS34YLR240W ALR1Q08269 859 aa3.65□□□□□ -1.83
VPS34YLR240W AMS1P22855 1083 aa3.64□□□□□ -1.83
VPS34YLR240W TPD3P31383 635 aa3.64□□□□□ -1.83
VPS34YLR240W KXD1P53158 218 aa3.64□□□□□ -1.83
VPS34YLR240W YPR097WQ06839 1073 aa3.64□□□□□ -1.83
VPS34YLR240W PKC1P24583 1151 aa3.64□□□□□ -1.83
VPS34YLR240W RRD1P40454 393 aaKnown RBP3.64□□□□□ -1.83
VPS34YLR240W MAK16P10962 306 aaPredicted RBP3.63□□□□□ -1.83
VPS34YLR240W CSE4P36012 229 aa3.63□□□□□ -1.83
VPS34YLR240W CST6P40535 587 aa3.63□□□□□ -1.83
VPS34YLR240W HXT10P43581 546 aa3.63□□□□□ -1.83
VPS34YLR240W DPS1P04802 557 aaKnown RBP3.62□□□□□ -1.83
VPS34YLR240W YBL036CP38197 257 aa3.62□□□□□ -1.83
VPS34YLR240W BDP1P46678 594 aa3.62□□□□□ -1.83
VPS34YLR240W RAS1P01119 309 aa3.6□□□□□ -1.83
VPS34YLR240W SPT5P27692 1063 aaKnown RBP3.6□□□□□ -1.83
VPS34YLR240W BIO2P32451 375 aa3.6□□□□□ -1.83
VPS34YLR240W NAF1P53919 492 aaKnown RBP3.6□□□□□ -1.83
VPS34YLR240W FRK1Q03002 865 aaPredicted RBP3.6□□□□□ -1.83
VPS34YLR240W VAC17P25591 423 aa3.58□□□□□ -1.84
VPS34YLR240W FIG4P42837 879 aa3.57□□□□□ -1.84
VPS34YLR240W YJL007CP47080 104 aa3.57□□□□□ -1.84
VPS34YLR240W PUS5Q06244 254 aa3.57□□□□□ -1.84
VPS34YLR240W TEC1P18412 486 aa3.57□□□□□ -1.84
VPS34YLR240W BIM1P40013 344 aa3.57□□□□□ -1.84
VPS34YLR240W SYH1Q02875 849 aaKnown RBP3.57□□□□□ -1.84
VPS34YLR240W HED1Q03937 162 aa3.57□□□□□ -1.84
VPS34YLR240W YPR084WQ06821 456 aa3.57□□□□□ -1.84
VPS34YLR240W SUP45P12385 437 aaKnown RBP3.56□□□□□ -1.84
VPS34YLR240W ATG32P40458 529 aa3.56□□□□□ -1.84
VPS34YLR240W MCM16Q12262 181 aa3.56□□□□□ -1.84
VPS34YLR240W YDJ1P25491 409 aaKnown RBP3.56□□□□□ -1.84
VPS34YLR240W CLA4P48562 842 aa3.56□□□□□ -1.84
VPS34YLR240W TIF1P10081 395 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms