RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W EAP1P36041 632 aaKnown RBP3.56□□□□□ -1.84
HRD3YLR207W TUM1Q08686 304 aaKnown RBP3.56□□□□□ -1.84
HRD3YLR207W SLY41P22215 453 aa3.55□□□□□ -1.84
HRD3YLR207W YJU3P28321 313 aa3.55□□□□□ -1.84
HRD3YLR207W ILV3P39522 585 aaKnown RBP3.55□□□□□ -1.84
HRD3YLR207W CDC73Q06697 393 aa3.55□□□□□ -1.84
HRD3YLR207W SSN2P38931 1420 aa3.55□□□□□ -1.84
HRD3YLR207W NST1P53935 1240 aa3.55□□□□□ -1.84
HRD3YLR207W LAM6Q08001 693 aa3.55□□□□□ -1.84
HRD3YLR207W PTC4P38089 393 aa3.54□□□□□ -1.84
HRD3YLR207W YPP1P46951 817 aa3.54□□□□□ -1.84
HRD3YLR207W GAP1P19145 602 aaPredicted RBP3.54□□□□□ -1.84
HRD3YLR207W TAF2P23255 1407 aa3.54□□□□□ -1.84
HRD3YLR207W KOG1P38873 1557 aa3.54□□□□□ -1.84
HRD3YLR207W TBF1Q02457 562 aa3.53□□□□□ -1.84
HRD3YLR207W PEX29Q03370 554 aa3.53□□□□□ -1.84
HRD3YLR207W IOC4Q04213 475 aa3.53□□□□□ -1.84
HRD3YLR207W ECM5Q03214 1411 aa3.53□□□□□ -1.84
HRD3YLR207W ENO1P00924 437 aaKnown RBP3.53□□□□□ -1.84
HRD3YLR207W SUP45P12385 437 aaKnown RBP3.53□□□□□ -1.84
HRD3YLR207W SIT4P20604 311 aa3.53□□□□□ -1.84
HRD3YLR207W YNL115CP53925 644 aa3.53□□□□□ -1.84
HRD3YLR207W JIP4Q03361 876 aa3.53□□□□□ -1.84
HRD3YLR207W YRR1Q12172 810 aa3.53□□□□□ -1.84
HRD3YLR207W XRN1P22147 1528 aaKnown RBP3.53□□□□□ -1.84
HRD3YLR207W ENO2P00925 437 aaKnown RBP3.52□□□□□ -1.85
HRD3YLR207W MAK16P10962 306 aaPredicted RBP3.52□□□□□ -1.85
HRD3YLR207W NOB1Q08444 459 aaKnown RBP3.52□□□□□ -1.85
HRD3YLR207W YDJ1P25491 409 aaKnown RBP3.52□□□□□ -1.85
HRD3YLR207W NPL4P33755 580 aa3.52□□□□□ -1.85
HRD3YLR207W SNU71P53207 620 aaKnown RBP3.52□□□□□ -1.85
HRD3YLR207W MRX12P47084 519 aa3.51□□□□□ -1.85
HRD3YLR207W RTF1P53064 558 aa3.51□□□□□ -1.85
HRD3YLR207W ORC1P54784 914 aaPredicted RBP3.51□□□□□ -1.85
HRD3YLR207W DPL1Q05567 589 aa3.51□□□□□ -1.85
HRD3YLR207W HIR3P47171 1648 aa3.51□□□□□ -1.85
HRD3YLR207W TRP5P00931 707 aaKnown RBP3.51□□□□□ -1.85
HRD3YLR207W PUS6P53294 404 aa3.51□□□□□ -1.85
HRD3YLR207W ENV9Q08651 330 aa3.51□□□□□ -1.85
HRD3YLR207W HAT1Q12341 374 aa3.51□□□□□ -1.85
HRD3YLR207W TGL4P36165 910 aa3.5□□□□□ -1.85
HRD3YLR207W TRM1P15565 570 aaKnown RBP3.5□□□□□ -1.85
HRD3YLR207W PUP1P25043 261 aa3.5□□□□□ -1.85
HRD3YLR207W KTR7P40504 517 aa3.5□□□□□ -1.85
HRD3YLR207W BUB1P41695 1021 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
HRD3YLR207W ISU2Q12056 156 aa3.5□□□□□ -1.85
HRD3YLR207W ULI1P43604 169 aa3.49□□□□□ -1.85
HRD3YLR207W RIM21P48565 533 aa3.49□□□□□ -1.85
HRD3YLR207W NAF1P53919 492 aaKnown RBP3.49□□□□□ -1.85
HRD3YLR207W YML083CQ04526 418 aa3.49□□□□□ -1.85
HRD3YLR207W HEM3P28789 327 aa3.49□□□□□ -1.85
HRD3YLR207W SSF1P38789 453 aaPredicted RBP3.49□□□□□ -1.85
HRD3YLR207W MET10P39692 1035 aa3.49□□□□□ -1.85
HRD3YLR207W PML39Q03760 334 aa3.49□□□□□ -1.85
HRD3YLR207W TFG1P41895 735 aaPredicted RBP3.48□□□□□ -1.85
HRD3YLR207W ECM23Q02710 187 aa3.48□□□□□ -1.85
HRD3YLR207W MRX10Q05648 414 aa3.48□□□□□ -1.85
HRD3YLR207W KEX2P13134 814 aa3.48□□□□□ -1.85
HRD3YLR207W RSC30P38781 883 aa3.48□□□□□ -1.85
HRD3YLR207W ATG3P40344 310 aa3.48□□□□□ -1.85
HRD3YLR207W MPC54Q08550 464 aa3.47□□□□□ -1.85
HRD3YLR207W MCM16Q12262 181 aa3.47□□□□□ -1.85
HRD3YLR207W NUD1P32336 851 aa3.47□□□□□ -1.85
HRD3YLR207W STM1P39015 273 aaKnown RBP3.47□□□□□ -1.85
HRD3YLR207W MID1P41821 548 aa3.47□□□□□ -1.85
HRD3YLR207W UBX7P38349 436 aa3.46□□□□□ -1.85
HRD3YLR207W TIF11P38912 153 aaKnown RBP3.46□□□□□ -1.85
HRD3YLR207W YNL035CP53962 389 aaKnown RBP3.46□□□□□ -1.85
HRD3YLR207W SEC20P28791 383 aa3.46□□□□□ -1.86
HRD3YLR207W ASF1P32447 279 aa3.46□□□□□ -1.86
HRD3YLR207W NMA111P53920 997 aa3.46□□□□□ -1.86
HRD3YLR207W SPP1Q03012 353 aa3.46□□□□□ -1.86
HRD3YLR207W SKI3P17883 1432 aaKnown RBP3.45□□□□□ -1.86
HRD3YLR207W BUD4P47136 1447 aa3.45□□□□□ -1.86
HRD3YLR207W GAL2P13181 574 aa3.45□□□□□ -1.86
HRD3YLR207W GCD11P32481 527 aaKnown RBP3.45□□□□□ -1.86
HRD3YLR207W ISF1P32488 338 aa3.45□□□□□ -1.86
HRD3YLR207W EMP47P43555 445 aa3.45□□□□□ -1.86
HRD3YLR207W STE20Q03497 939 aaKnown RBP3.45□□□□□ -1.86
HRD3YLR207W ITT1Q04638 464 aa3.45□□□□□ -1.86
HRD3YLR207W YDL206WQ12424 762 aa3.45□□□□□ -1.86
HRD3YLR207W YBL029C-AQ3E756 94 aa3.45□□□□□ -1.86
HRD3YLR207W RRN6P32786 894 aa3.44□□□□□ -1.86
HRD3YLR207W KAR5Q04746 504 aa3.44□□□□□ -1.86
HRD3YLR207W YBL113CQ7M4S9 792 aa3.44□□□□□ -1.86
HRD3YLR207W TEC1P18412 486 aa3.44□□□□□ -1.86
HRD3YLR207W GUT2P32191 649 aa3.44□□□□□ -1.86
HRD3YLR207W VNX1P42839 908 aa3.44□□□□□ -1.86
HRD3YLR207W ALR1Q08269 859 aa3.44□□□□□ -1.86
HRD3YLR207W PEP12P32854 288 aa3.43□□□□□ -1.86
HRD3YLR207W PAT1P25644 796 aaKnown RBP3.43□□□□□ -1.86
HRD3YLR207W RTG1P32607 177 aa3.43□□□□□ -1.86
HRD3YLR207W UBP9P39967 754 aa3.43□□□□□ -1.86
HRD3YLR207W SEN54Q02825 467 aaPredicted RBP3.43□□□□□ -1.86
HRD3YLR207W ERF2Q06551 359 aa3.43□□□□□ -1.86
HRD3YLR207W YEL077CQ3E7X8 1277 aa3.43□□□□□ -1.86
HRD3YLR207W HAP4P14064 554 aa3.42□□□□□ -1.86
HRD3YLR207W RPA14P50106 137 aa3.42□□□□□ -1.86
HRD3YLR207W RAM1P22007 431 aa3.42□□□□□ -1.86
HRD3YLR207W SEC61P32915 480 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms